RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 GMCL1Q96IK5 515 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 YME1L1Q96TA2 773 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 ZNF70Q9UC06 446 aaPredicted RBP14.56□□□□□ -0.08
PTPN13-203ENST00000427191 PDE2AO00408 941 aaPredicted RBP14.56□□□□□ -0.08
PTPN13-203ENST00000427191 CCNYL3P0C7X3 344 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 PTX3P26022 381 aaPredicted RBP14.56□□□□□ -0.08
PTPN13-203ENST00000427191 MNDAP41218 407 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 PRKG2Q13237 762 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 LRRC38Q5VT99 294 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 DAW1Q8N136 415 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 BPIFB6Q8NFQ5 453 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 DHRS7Q9Y394 339 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 JCADQ9P266 1359 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 ZBTB22O15209 634 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 HOPXQ9BPY8 73 aaPredicted RBP14.56□□□□□ -0.08
PTPN13-203ENST00000427191 KCNN2Q9H2S1 579 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 MCIDASD6RGH6 385 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 HERVK_113P62684 666 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 PPP1R15BQ5SWA1 713 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 SMIM5Q71RC9 77 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 ATG9AQ7Z3C6 839 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 FAM131BQ86XD5 332 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 TMC8Q8IU68 726 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 SLC6A2P23975 617 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 PTDSS1P48651 473 aaKnown RBP14.56□□□□□ -0.08
PTPN13-203ENST00000427191 ELF3P78545 371 aaPredicted RBP14.56□□□□□ -0.08
PTPN13-203ENST00000427191 GIT2Q14161 759 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 NKX1-1Q15270 411 aaPredicted RBP14.56□□□□□ -0.08
PTPN13-203ENST00000427191 ZDHHC20Q5W0Z9 365 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 ATG14Q6ZNE5 492 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 CIPCQ9C0C6 399 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 SNX7Q9UNH6 387 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 DHRS12A0PJE2 317 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 ARF5P84085 180 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 ZPBP2Q6X784 338 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 CHST15Q7LFX5 561 aaPredicted RBP14.56□□□□□ -0.08
PTPN13-203ENST00000427191 NIPA1Q7RTP0 329 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 SPATA31A3Q5VYP0 1347 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 ZC3H13Q5T200 1668 aaKnown RBP14.56□□□□□ -0.08
PTPN13-203ENST00000427191 ULK1O75385 1050 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 NFKB1P19838 968 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 RPL4P36578 427 aaKnown RBP14.56□□□□□ -0.08
PTPN13-203ENST00000427191 RBM20Q5T481 1227 aaKnown RBP14.56□□□□□ -0.08
PTPN13-203ENST00000427191 ARHGAP36Q6ZRI8 547 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 FAM129BQ96TA1 746 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 GORASP1Q9BQQ3 440 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 POPDC2Q9HBU9 364 aa14.56□□□□□ -0.08
PTPN13-203ENST00000427191 C2CD2LO14523 706 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 MGAT1P26572 445 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 CLK2P49760 499 aaKnown RBP14.55□□□□□ -0.08
PTPN13-203ENST00000427191 CASP5P51878 434 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 MKRN4PQ13434 485 aaPredicted RBP14.55□□□□□ -0.08
PTPN13-203ENST00000427191 TCAIMQ8N3R3 496 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 CLHC1Q8NHS4 586 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 CKAP2Q8WWK9 683 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 ACSF2Q96CM8 615 aaPredicted RBP14.55□□□□□ -0.08
PTPN13-203ENST00000427191 C12orf66Q96MD2 445 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 SEMA3GQ9NS98 782 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 ZNF221Q9UK13 617 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 RBM7Q9Y580 266 aaKnown RBP14.55□□□□□ -0.08
PTPN13-203ENST00000427191 TUBP50607 506 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 ADIGQ0VDE8 80 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 NRF1Q16656 503 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 ERICH5Q6P6B1 374 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 FAM171BQ6P995 826 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 RNF44Q7L0R7 432 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 PIH1D2Q8WWB5 315 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 ATP13A1Q9HD20 1204 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 MADDQ8WXG6 1647 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 A0A0A0MRY4 1105 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 SUV39H1O43463 412 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 PDX1P52945 283 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 LIPMQ5VYY2 423 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 MINDY2Q8NBR6 621 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 KAT2BQ92831 832 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 SPATA13Q96N96 652 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 RBM4BQ9BQ04 359 aaKnown RBP14.55□□□□□ -0.08
PTPN13-203ENST00000427191 MTG1Q9BT17 334 aaPredicted RBP14.55□□□□□ -0.08
PTPN13-203ENST00000427191 RBM4Q9BWF3 364 aaKnown RBP14.55□□□□□ -0.08
PTPN13-203ENST00000427191 PNPLA8Q9NP80 782 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 G3V2T6 193 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 ITGAVP06756 1048 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 GLI1P08151 1106 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 MYBPC1Q00872 1141 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 RBBP4Q09028 425 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 GRB14Q14449 540 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 OVOS1Q6IE37 1185 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 TDRD1Q9BXT4 1180 aaKnown RBP14.55□□□□□ -0.08
PTPN13-203ENST00000427191 SEMA4AQ9H3S1 761 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 ABCC13Q9NSE7 274 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 GRM3Q14832 879 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 PTF1AQ7RTS3 328 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 RAB43Q86YS6 212 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 PYDC1Q8WXC3 89 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 APBA2Q99767 749 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 ZMYM5Q9UJ78 669 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 MRPS33Q9Y291 106 aaKnown RBP14.55□□□□□ -0.08
PTPN13-203ENST00000427191 TPP1O14773 563 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 POLR2EP19388 210 aaKnown RBP14.55□□□□□ -0.08
PTPN13-203ENST00000427191 GSSP48637 474 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms