RNA–Protein interactions for RNA: ENST00000427112.6

USP40-203, Transcript of ubiquitin specific peptidase 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP40, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-203ENST00000427112 ASB7Q9H672 318 aa8.75□□□□□ -1.01
USP40-203ENST00000427112 GPRC5DQ9NZD1 345 aa8.75□□□□□ -1.01
USP40-203ENST00000427112 ADAMTS5Q9UNA0 930 aa8.75□□□□□ -1.01
USP40-203ENST00000427112 PCDHB12Q9Y5F1 795 aa8.75□□□□□ -1.01
USP40-203ENST00000427112 MAGED1Q9Y5V3 778 aaPredicted RBP8.75□□□□□ -1.01
USP40-203ENST00000427112 ZBBXA8MT70 800 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 B3GAT3O94766 335 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 FAM200BP0CF97 657 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 ITGB6P18564 788 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 ME2P23368 584 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 KCNC1P48547 511 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 LIMK2P53671 638 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 LILRA4P59901 499 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 NRG1Q02297 640 aaPredicted RBP8.74□□□□□ -1.01
USP40-203ENST00000427112 FASTKQ14296 549 aaKnown RBP8.74□□□□□ -1.01
USP40-203ENST00000427112 C16orf72Q14CZ0 275 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 CLEC20AQ6ZU45 233 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 ARCQ7LC44 396 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 ANKRD23Q86SG2 305 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 SNX29P2Q8IUI4 249 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 TMEM174Q8WUU8 243 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 SREK1Q8WXA9 508 aaKnown RBP8.74□□□□□ -1.01
USP40-203ENST00000427112 PCED1BQ96HM7 432 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 FBXL20Q96IG2 436 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 TSPYL2Q9H2G4 693 aaPredicted RBP8.74□□□□□ -1.01
USP40-203ENST00000427112 FAM96AQ9H5X1 160 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 ARMC7Q9H6L4 198 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 NCKIPSDQ9NZQ3 722 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 RNF181Q9P0P0 153 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 AASSQ9UDR5 926 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 TRIP12Q14669 1992 aaPredicted RBP8.74□□□□□ -1.01
USP40-203ENST00000427112 RGSL1A5PLK6 1076 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 MOXD2PA6NHM9 499 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 KLF11O14901 512 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 BIRC5O15392 142 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 XPOTO43592 962 aaKnown RBP8.74□□□□□ -1.01
USP40-203ENST00000427112 SLC35E2BP0CK96 405 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 THRAP10827 490 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 MTTPP55157 894 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 ZNF280AP59817 542 aaPredicted RBP8.74□□□□□ -1.01
USP40-203ENST00000427112 CARTPTQ16568 116 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 OTUD1Q5VV17 481 aaPredicted RBP8.74□□□□□ -1.01
USP40-203ENST00000427112 UGT2A3Q6UWM9 527 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 XKR5Q6UX68 686 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 MILR1Q7Z6M3 343 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 RALGPS2Q86X27 583 aaPredicted RBP8.74□□□□□ -1.01
USP40-203ENST00000427112 HERC6Q8IVU3 1022 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 MTMR14Q8NCE2 650 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 ANKRD49Q8WVL7 239 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 WNT8BQ93098 351 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 CPNE1Q99829 537 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 GPAMQ9HCL2 828 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 SEMA4BQ9NPR2 832 aaPredicted RBP8.74□□□□□ -1.01
USP40-203ENST00000427112 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.74□□□□□ -1.01
USP40-203ENST00000427112 EPS15L1Q9UBC2 864 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 LRRC37AA6NMS7 1700 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 IGKV6-21A0A0C4DH24 114 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 A0A1B0GTL3 188 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 PRORSD1PA6NEY8 169 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 BOLA2-SMG1P6H3BVE0 249 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 CRCPO75575 148 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 FBXO21O94952 628 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 SBK3P0C264 359 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 STMN1P16949 149 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 GRK2P25098 689 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 GPR15P49685 360 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 TAF6P49848 677 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 SLC25A52Q3SY17 297 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 MARCH8Q5T0T0 291 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 SLC26A9Q7LBE3 791 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 CENPLQ8N0S6 344 aaPredicted RBP8.74□□□□□ -1.01
USP40-203ENST00000427112 C3orf58Q8NDZ4 430 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 CNDP1Q96KN2 507 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 TMEM74Q96NL1 305 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 CDK15Q96Q40 435 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 NAA50Q9GZZ1 169 aaKnown RBP8.74□□□□□ -1.01
USP40-203ENST00000427112 PNPLA8Q9NP80 782 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 CRTAC1Q9NQ79 661 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 ARHGEF38Q9NXL2 777 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 STAP1Q9ULZ2 295 aa8.74□□□□□ -1.01
USP40-203ENST00000427112 A0A1W2PQ67 120 aa8.73□□□□□ -1.01
USP40-203ENST00000427112 ARHGAP10A1A4S6 786 aa8.73□□□□□ -1.01
USP40-203ENST00000427112 J3QRK9 145 aa8.73□□□□□ -1.01
USP40-203ENST00000427112 NDC80O14777 642 aa8.73□□□□□ -1.01
USP40-203ENST00000427112 LSM1O15116 133 aaKnown RBP8.73□□□□□ -1.01
USP40-203ENST00000427112 VILLO15195 856 aa8.73□□□□□ -1.01
USP40-203ENST00000427112 FYNP06241 537 aa8.73□□□□□ -1.01
USP40-203ENST00000427112 SMIM18P0DKX4 95 aa8.73□□□□□ -1.01
USP40-203ENST00000427112 TGFB3P10600 412 aa8.73□□□□□ -1.01
USP40-203ENST00000427112 TPSB2P20231 275 aa8.73□□□□□ -1.01
USP40-203ENST00000427112 FUT4P22083 530 aa8.73□□□□□ -1.01
USP40-203ENST00000427112 GSSP48637 474 aa8.73□□□□□ -1.01
USP40-203ENST00000427112 OAZ1P54368 228 aa8.73□□□□□ -1.01
USP40-203ENST00000427112 FOXA1P55317 472 aa8.73□□□□□ -1.01
USP40-203ENST00000427112 ATP1A4Q13733 1029 aa8.73□□□□□ -1.01
USP40-203ENST00000427112 GALNT3Q14435 633 aa8.73□□□□□ -1.01
USP40-203ENST00000427112 TPSAB1Q15661 275 aa8.73□□□□□ -1.01
USP40-203ENST00000427112 CCL14Q16627 93 aa8.73□□□□□ -1.01
USP40-203ENST00000427112 PFKFB4Q16877 469 aa8.73□□□□□ -1.01
USP40-203ENST00000427112 SLC44A4Q53GD3 710 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms