RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 CEP41Q9BYV8 373 aa24.78■■□□□ 1.56
VEGFA-209ENST00000425836 NOD2Q9HC29 1040 aa24.78■■□□□ 1.56
VEGFA-209ENST00000425836 ATP8A1Q9Y2Q0 1164 aa24.78■■□□□ 1.56
VEGFA-209ENST00000425836 NEBLO76041 1014 aa24.77■■□□□ 1.56
VEGFA-209ENST00000425836 PIGNO95427 931 aa24.77■■□□□ 1.56
VEGFA-209ENST00000425836 ITGB7P26010 798 aa24.77■■□□□ 1.56
VEGFA-209ENST00000425836 MAPK8P45983 427 aa24.77■■□□□ 1.56
VEGFA-209ENST00000425836 ITKQ08881 620 aa24.77■■□□□ 1.56
VEGFA-209ENST00000425836 SIM2Q14190 667 aaPredicted RBP24.77■■□□□ 1.56
VEGFA-209ENST00000425836 GRM3Q14832 879 aa24.77■■□□□ 1.56
VEGFA-209ENST00000425836 ZNF805Q5CZA5 627 aa24.77■■□□□ 1.56
VEGFA-209ENST00000425836 ALG1LQ6GMV1 187 aa24.77■■□□□ 1.56
VEGFA-209ENST00000425836 CEP68Q76N32 757 aa24.77■■□□□ 1.56
VEGFA-209ENST00000425836 HTR3CQ8WXA8 447 aa24.77■■□□□ 1.56
VEGFA-209ENST00000425836 PPP1R16AQ96I34 528 aa24.77■■□□□ 1.56
VEGFA-209ENST00000425836 PBKQ96KB5 322 aa24.77■■□□□ 1.56
VEGFA-209ENST00000425836 KLHL32Q96NJ5 620 aa24.77■■□□□ 1.56
VEGFA-209ENST00000425836 POLR1EQ9GZS1 481 aaKnown RBP24.77■■□□□ 1.56
VEGFA-209ENST00000425836 SCUBE2Q9NQ36 999 aa24.77■■□□□ 1.56
VEGFA-209ENST00000425836 DYRK4Q9NR20 520 aa24.77■■□□□ 1.56
VEGFA-209ENST00000425836 FZD4Q9ULV1 537 aa24.77■■□□□ 1.56
VEGFA-209ENST00000425836 MTSS1O43312 755 aa24.76■■□□□ 1.55
VEGFA-209ENST00000425836 PTPN3P26045 913 aa24.76■■□□□ 1.55
VEGFA-209ENST00000425836 RBL1P28749 1068 aa24.76■■□□□ 1.55
VEGFA-209ENST00000425836 ACSL1P33121 698 aa24.76■■□□□ 1.55
VEGFA-209ENST00000425836 NBL1P41271 181 aa24.76■■□□□ 1.55
VEGFA-209ENST00000425836 WASHC5Q12768 1159 aa24.76■■□□□ 1.55
VEGFA-209ENST00000425836 TEX44Q53QW1 395 aa24.76■■□□□ 1.55
VEGFA-209ENST00000425836 SLC36A4Q6YBV0 504 aa24.76■■□□□ 1.55
VEGFA-209ENST00000425836 C11orf74Q86VG3 221 aa24.76■■□□□ 1.55
VEGFA-209ENST00000425836 CAMK1DQ8IU85 385 aa24.76■■□□□ 1.55
VEGFA-209ENST00000425836 SEMA3CQ99985 751 aa24.76■■□□□ 1.55
VEGFA-209ENST00000425836 HDAC8Q9BY41 377 aa24.76■■□□□ 1.55
VEGFA-209ENST00000425836 BTBD1Q9H0C5 482 aa24.76■■□□□ 1.55
VEGFA-209ENST00000425836 SUV39H2Q9H5I1 410 aa24.76■■□□□ 1.55
VEGFA-209ENST00000425836 ATP13A3Q9H7F0 1226 aa24.76■■□□□ 1.55
VEGFA-209ENST00000425836 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.76■■□□□ 1.55
VEGFA-209ENST00000425836 SNX12Q9UMY4 172 aa24.76■■□□□ 1.55
VEGFA-209ENST00000425836 TTLL3Q9Y4R7 772 aa24.76■■□□□ 1.55
VEGFA-209ENST00000425836 ARIH1Q9Y4X5 557 aaPredicted RBP24.76■■□□□ 1.55
VEGFA-209ENST00000425836 MAP3K13O43283 966 aa24.76■■□□□ 1.55
VEGFA-209ENST00000425836 FGGP02679 453 aa24.76■■□□□ 1.55
VEGFA-209ENST00000425836 PLK5Q496M5 336 aa24.76■■□□□ 1.55
VEGFA-209ENST00000425836 RALGPS1Q5JS13 557 aa24.76■■□□□ 1.55
VEGFA-209ENST00000425836 AGBL4Q5VU57 503 aa24.76■■□□□ 1.55
VEGFA-209ENST00000425836 DARS2Q6PI48 645 aaKnown RBP24.76■■□□□ 1.55
VEGFA-209ENST00000425836 ERN2Q76MJ5 926 aaKnown RBP24.76■■□□□ 1.55
VEGFA-209ENST00000425836 PARS2Q7L3T8 475 aaKnown RBP24.76■■□□□ 1.55
VEGFA-209ENST00000425836 CDKL3Q8IVW4 592 aaPredicted RBP24.76■■□□□ 1.55
VEGFA-209ENST00000425836 SLC35B2Q8TB61 432 aa24.76■■□□□ 1.55
VEGFA-209ENST00000425836 ARRDC2Q8TBH0 407 aa24.76■■□□□ 1.55
VEGFA-209ENST00000425836 TRIM44Q96DX7 344 aaPredicted RBP24.76■■□□□ 1.55
VEGFA-209ENST00000425836 ZNF641Q96N77 438 aaPredicted RBP24.76■■□□□ 1.55
VEGFA-209ENST00000425836 AGAP3Q96P47 875 aa24.76■■□□□ 1.55
VEGFA-209ENST00000425836 OSBPL9Q96SU4 736 aa24.76■■□□□ 1.55
VEGFA-209ENST00000425836 EPC1Q9H2F5 836 aa24.76■■□□□ 1.55
VEGFA-209ENST00000425836 SGK2Q9HBY8 427 aa24.76■■□□□ 1.55
VEGFA-209ENST00000425836 HAUS2Q9NVX0 235 aa24.76■■□□□ 1.55
VEGFA-209ENST00000425836 C16orf96A6NNT2 1141 aa24.75■■□□□ 1.55
VEGFA-209ENST00000425836 DSC2Q02487 901 aa24.75■■□□□ 1.55
VEGFA-209ENST00000425836 BCL2L1Q07817 233 aa24.75■■□□□ 1.55
VEGFA-209ENST00000425836 NIPAL4Q0D2K0 466 aa24.75■■□□□ 1.55
VEGFA-209ENST00000425836 SIX1Q15475 284 aaPredicted RBP24.75■■□□□ 1.55
VEGFA-209ENST00000425836 PIP5KL1Q5T9C9 394 aa24.75■■□□□ 1.55
VEGFA-209ENST00000425836 RASGEF1CQ8N431 466 aa24.75■■□□□ 1.55
VEGFA-209ENST00000425836 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP24.75■■□□□ 1.55
VEGFA-209ENST00000425836 COG1Q8WTW3 980 aa24.75■■□□□ 1.55
VEGFA-209ENST00000425836 ATG4AQ8WYN0 398 aa24.75■■□□□ 1.55
VEGFA-209ENST00000425836 ZC3H10Q96K80 434 aaKnown RBP24.75■■□□□ 1.55
VEGFA-209ENST00000425836 GPR174Q9BXC1 333 aa24.75■■□□□ 1.55
VEGFA-209ENST00000425836 DUSP15Q9H1R2 295 aaPredicted RBP24.75■■□□□ 1.55
VEGFA-209ENST00000425836 DKK3Q9UBP4 350 aa24.75■■□□□ 1.55
VEGFA-209ENST00000425836 CACNA1HO95180 2353 aa24.74■■□□□ 1.55
VEGFA-209ENST00000425836 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP24.74■■□□□ 1.55
VEGFA-209ENST00000425836 BCLAF3A2AJT9 711 aaKnown RBP24.74■■□□□ 1.55
VEGFA-209ENST00000425836 SLC7A4O43246 635 aa24.74■■□□□ 1.55
VEGFA-209ENST00000425836 NDUFS2O75306 463 aa24.74■■□□□ 1.55
VEGFA-209ENST00000425836 CES1P23141 567 aa24.74■■□□□ 1.55
VEGFA-209ENST00000425836 SERPINA4P29622 427 aa24.74■■□□□ 1.55
VEGFA-209ENST00000425836 RPL6Q02878 288 aaKnown RBP24.74■■□□□ 1.55
VEGFA-209ENST00000425836 IHHQ14623 411 aa24.74■■□□□ 1.55
VEGFA-209ENST00000425836 PRR23BQ6ZRT6 265 aa24.74■■□□□ 1.55
VEGFA-209ENST00000425836 HCAR2Q8TDS4 363 aa24.74■■□□□ 1.55
VEGFA-209ENST00000425836 TEKT5Q96M29 485 aa24.74■■□□□ 1.55
VEGFA-209ENST00000425836 USP29Q9HBJ7 922 aa24.74■■□□□ 1.55
VEGFA-209ENST00000425836 DNPEPQ9ULA0 475 aa24.74■■□□□ 1.55
VEGFA-209ENST00000425836 ZKSCAN5Q9Y2L8 839 aa24.74■■□□□ 1.55
VEGFA-209ENST00000425836 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa24.73■■□□□ 1.55
VEGFA-209ENST00000425836 TRAFD1O14545 582 aaPredicted RBP24.73■■□□□ 1.55
VEGFA-209ENST00000425836 NEK3P51956 506 aa24.73■■□□□ 1.55
VEGFA-209ENST00000425836 ADPRHP54922 357 aa24.73■■□□□ 1.55
VEGFA-209ENST00000425836 NHLH1Q02575 133 aa24.73■■□□□ 1.55
VEGFA-209ENST00000425836 CCDC15Q0P6D6 951 aa24.73■■□□□ 1.55
VEGFA-209ENST00000425836 LONRF2Q1L5Z9 754 aa24.73■■□□□ 1.55
VEGFA-209ENST00000425836 PMS2CLQ68D20 193 aa24.73■■□□□ 1.55
VEGFA-209ENST00000425836 FBXL19Q6PCT2 694 aa24.73■■□□□ 1.55
VEGFA-209ENST00000425836 TMEFF1Q8IYR6 380 aa24.73■■□□□ 1.55
VEGFA-209ENST00000425836 DEFB119Q8N690 84 aa24.73■■□□□ 1.55
VEGFA-209ENST00000425836 OR14C36Q8NHC7 312 aa24.73■■□□□ 1.55
VEGFA-209ENST00000425836 C1orf54Q8WWF1 131 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms