RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 DPH1Q9BZG8 443 aa15.22■□□□□ 0.03
ATG4B-209ENST00000425239 TM6SF2Q9BZW4 377 aa15.22■□□□□ 0.03
ATG4B-209ENST00000425239 CLPBQ9H078 707 aa15.22■□□□□ 0.03
ATG4B-209ENST00000425239 RETREG1Q9H6L5 497 aa15.22■□□□□ 0.03
ATG4B-209ENST00000425239 NOL6Q9H6R4 1146 aaKnown RBP15.22■□□□□ 0.03
ATG4B-209ENST00000425239 TMEM248Q9NWD8 314 aa15.22■□□□□ 0.03
ATG4B-209ENST00000425239 NOCTQ9UK39 431 aaKnown RBP15.22■□□□□ 0.03
ATG4B-209ENST00000425239 SATB2Q9UPW6 733 aa15.22■□□□□ 0.03
ATG4B-209ENST00000425239 COL6A6A6NMZ7 2263 aa15.22■□□□□ 0.03
ATG4B-209ENST00000425239 CDRT15L2A8MXV6 281 aa15.21■□□□□ 0.03
ATG4B-209ENST00000425239 GOLGA8SH3BPF8 625 aa15.21■□□□□ 0.03
ATG4B-209ENST00000425239 ITIH2P19823 946 aa15.21■□□□□ 0.03
ATG4B-209ENST00000425239 ATP11AP98196 1134 aa15.21■□□□□ 0.03
ATG4B-209ENST00000425239 C15orf59Q2T9L4 293 aaPredicted RBP15.21■□□□□ 0.03
ATG4B-209ENST00000425239 MYLK3Q32MK0 819 aa15.21■□□□□ 0.03
ATG4B-209ENST00000425239 EFL1Q7Z2Z2 1120 aaKnown RBP15.21■□□□□ 0.03
ATG4B-209ENST00000425239 SLC35F3Q8IY50 421 aa15.21■□□□□ 0.03
ATG4B-209ENST00000425239 RBFAQ8N0V3 343 aa15.21■□□□□ 0.03
ATG4B-209ENST00000425239 DENND6BQ8NEG7 585 aa15.21■□□□□ 0.03
ATG4B-209ENST00000425239 OR2AP1Q8NGE2 309 aa15.21■□□□□ 0.03
ATG4B-209ENST00000425239 OR6K2Q8NGY2 324 aa15.21■□□□□ 0.03
ATG4B-209ENST00000425239 GRAMD1AQ96CP6 724 aa15.21■□□□□ 0.03
ATG4B-209ENST00000425239 VCPIP1Q96JH7 1222 aa15.21■□□□□ 0.03
ATG4B-209ENST00000425239 STK33Q9BYT3 514 aa15.21■□□□□ 0.03
ATG4B-209ENST00000425239 ABCG4Q9H172 646 aa15.21■□□□□ 0.03
ATG4B-209ENST00000425239 ZDHHC6Q9H6R6 413 aa15.21■□□□□ 0.03
ATG4B-209ENST00000425239 MBNL1Q9NR56 388 aaKnown RBP15.21■□□□□ 0.03
ATG4B-209ENST00000425239 PCDHGA8Q9Y5G5 932 aa15.21■□□□□ 0.03
ATG4B-209ENST00000425239 CPED1A4D0V7 1026 aa15.2■□□□□ 0.02
ATG4B-209ENST00000425239 C2CD4BA6NLJ0 364 aa15.2■□□□□ 0.02
ATG4B-209ENST00000425239 F8VZ95 297 aa15.2■□□□□ 0.02
ATG4B-209ENST00000425239 RIOK3O14730 519 aaKnown RBP15.2■□□□□ 0.02
ATG4B-209ENST00000425239 YY2O15391 372 aa15.2■□□□□ 0.02
ATG4B-209ENST00000425239 LRIG2O94898 1065 aa15.2■□□□□ 0.02
ATG4B-209ENST00000425239 POP4O95707 220 aaKnown RBP15.2■□□□□ 0.02
ATG4B-209ENST00000425239 GSRP00390 522 aa15.2■□□□□ 0.02
ATG4B-209ENST00000425239 RHOQP17081 205 aa15.2■□□□□ 0.02
ATG4B-209ENST00000425239 MMP8P22894 467 aa15.2■□□□□ 0.02
ATG4B-209ENST00000425239 IGFALSP35858 605 aa15.2■□□□□ 0.02
ATG4B-209ENST00000425239 MAPKAPK2P49137 400 aa15.2■□□□□ 0.02
ATG4B-209ENST00000425239 TMPRSS3P57727 454 aa15.2■□□□□ 0.02
ATG4B-209ENST00000425239 PTP4A2Q12974 167 aa15.2■□□□□ 0.02
ATG4B-209ENST00000425239 SGCGQ13326 291 aa15.2■□□□□ 0.02
ATG4B-209ENST00000425239 RAPGEF1Q13905 1077 aa15.2■□□□□ 0.02
ATG4B-209ENST00000425239 ARHGAP40Q5TG30 622 aa15.2■□□□□ 0.02
ATG4B-209ENST00000425239 ZNF605Q86T29 641 aa15.2■□□□□ 0.02
ATG4B-209ENST00000425239 TP53I13Q8NBR0 393 aaPredicted RBP15.2■□□□□ 0.02
ATG4B-209ENST00000425239 JOSD2Q8TAC2 188 aa15.2■□□□□ 0.02
ATG4B-209ENST00000425239 LMX1AQ8TE12 382 aa15.2■□□□□ 0.02
ATG4B-209ENST00000425239 SLC20A1Q8WUM9 679 aa15.2■□□□□ 0.02
ATG4B-209ENST00000425239 RXFP2Q8WXD0 754 aa15.2■□□□□ 0.02
ATG4B-209ENST00000425239 TBATAQ96M53 351 aa15.2■□□□□ 0.02
ATG4B-209ENST00000425239 KLHL32Q96NJ5 620 aa15.2■□□□□ 0.02
ATG4B-209ENST00000425239 LRRC61Q9BV99 259 aa15.2■□□□□ 0.02
ATG4B-209ENST00000425239 MAGEH1Q9H213 219 aa15.2■□□□□ 0.02
ATG4B-209ENST00000425239 METTL5Q9NRN9 209 aaKnown RBP15.2■□□□□ 0.02
ATG4B-209ENST00000425239 DNAI1Q9UI46 699 aa15.2■□□□□ 0.02
ATG4B-209ENST00000425239 LRRK1Q38SD2 2015 aa15.2■□□□□ 0.02
ATG4B-209ENST00000425239 PIEZO2Q9H5I5 2752 aa15.2■□□□□ 0.02
ATG4B-209ENST00000425239 LMO7DNF2Z398 122 aa15.19■□□□□ 0.02
ATG4B-209ENST00000425239 H3BM21 787 aa15.19■□□□□ 0.02
ATG4B-209ENST00000425239 NTN3O00634 580 aaPredicted RBP15.19■□□□□ 0.02
ATG4B-209ENST00000425239 KLK10O43240 276 aa15.19■□□□□ 0.02
ATG4B-209ENST00000425239 EFSO43281 561 aa15.19■□□□□ 0.02
ATG4B-209ENST00000425239 KDELR3O43731 214 aa15.19■□□□□ 0.02
ATG4B-209ENST00000425239 GJB6O95452 261 aa15.19■□□□□ 0.02
ATG4B-209ENST00000425239 UGT2B4P06133 528 aa15.19■□□□□ 0.02
ATG4B-209ENST00000425239 TIMP2P16035 220 aa15.19■□□□□ 0.02
ATG4B-209ENST00000425239 PTPN9P43378 593 aa15.19■□□□□ 0.02
ATG4B-209ENST00000425239 UCNP55089 124 aa15.19■□□□□ 0.02
ATG4B-209ENST00000425239 ADKP55263 362 aaKnown RBP15.19■□□□□ 0.02
ATG4B-209ENST00000425239 HDAC4P56524 1084 aa15.19■□□□□ 0.02
ATG4B-209ENST00000425239 UBE2HP62256 183 aa15.19■□□□□ 0.02
ATG4B-209ENST00000425239 YPEL5P62699 121 aa15.19■□□□□ 0.02
ATG4B-209ENST00000425239 FMO1Q01740 532 aa15.19■□□□□ 0.02
ATG4B-209ENST00000425239 RHDQ02161 417 aa15.19■□□□□ 0.02
ATG4B-209ENST00000425239 C1orf61Q13536 156 aa15.19■□□□□ 0.02
ATG4B-209ENST00000425239 DPCR1Q3MIW9 517 aa15.19■□□□□ 0.02
ATG4B-209ENST00000425239 HSP90AA4PQ58FG1 418 aa15.19■□□□□ 0.02
ATG4B-209ENST00000425239 C6orf132Q5T0Z8 1188 aa15.19■□□□□ 0.02
ATG4B-209ENST00000425239 ATXN7L2Q5T6C5 722 aaPredicted RBP15.19■□□□□ 0.02
ATG4B-209ENST00000425239 NAA35Q5VZE5 725 aa15.19■□□□□ 0.02
ATG4B-209ENST00000425239 CRTC1Q6UUV9 634 aa15.19■□□□□ 0.02
ATG4B-209ENST00000425239 LEKR1Q6ZMV7 388 aa15.19■□□□□ 0.02
ATG4B-209ENST00000425239 NYAP1Q6ZVC0 841 aa15.19■□□□□ 0.02
ATG4B-209ENST00000425239 CCDC185Q8N715 623 aa15.19■□□□□ 0.02
ATG4B-209ENST00000425239 TPCN2Q8NHX9 752 aa15.19■□□□□ 0.02
ATG4B-209ENST00000425239 GPT2Q8TD30 523 aa15.19■□□□□ 0.02
ATG4B-209ENST00000425239 BTN2A2Q8WVV5 523 aa15.19■□□□□ 0.02
ATG4B-209ENST00000425239 KCNE4Q8WWG9 221 aa15.19■□□□□ 0.02
ATG4B-209ENST00000425239 KLC2Q9H0B6 622 aa15.19■□□□□ 0.02
ATG4B-209ENST00000425239 PDCL3Q9H2J4 239 aa15.19■□□□□ 0.02
ATG4B-209ENST00000425239 SAMSN1Q9NSI8 373 aaKnown RBP15.19■□□□□ 0.02
ATG4B-209ENST00000425239 NCKIPSDQ9NZQ3 722 aa15.19■□□□□ 0.02
ATG4B-209ENST00000425239 IPO11Q9UI26 975 aaKnown RBP15.19■□□□□ 0.02
ATG4B-209ENST00000425239 MFHAS1Q9Y4C4 1052 aa15.19■□□□□ 0.02
ATG4B-209ENST00000425239 KRIT1O00522 736 aa15.18■□□□□ 0.02
ATG4B-209ENST00000425239 MMP20O60882 483 aa15.18■□□□□ 0.02
ATG4B-209ENST00000425239 TCEA3O75764 348 aa15.18■□□□□ 0.02
ATG4B-209ENST00000425239 CELA2BP08218 269 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms