RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 TMCO4Q5TGY1 634 aa11.1□□□□□ -0.63
USP49-204ENST00000423567 AFMIDQ63HM1 303 aa11.1□□□□□ -0.63
USP49-204ENST00000423567 TXNRD3NBQ6F5E7 133 aa11.1□□□□□ -0.63
USP49-204ENST00000423567 NAPEPLDQ6IQ20 393 aa11.1□□□□□ -0.63
USP49-204ENST00000423567 GDPD4Q6W3E5 623 aa11.1□□□□□ -0.63
USP49-204ENST00000423567 ZSCAN30Q86W11 494 aa11.1□□□□□ -0.63
USP49-204ENST00000423567 TMTC1Q8IUR5 882 aa11.1□□□□□ -0.63
USP49-204ENST00000423567 BBS5Q8N3I7 341 aa11.1□□□□□ -0.63
USP49-204ENST00000423567 ATPAF2Q8N5M1 289 aa11.1□□□□□ -0.63
USP49-204ENST00000423567 NPWQ8N729 165 aa11.1□□□□□ -0.63
USP49-204ENST00000423567 PAF1Q8N7H5 531 aa11.1□□□□□ -0.63
USP49-204ENST00000423567 RAB7BQ96AH8 199 aa11.1□□□□□ -0.63
USP49-204ENST00000423567 FEM1CQ96JP0 617 aa11.1□□□□□ -0.63
USP49-204ENST00000423567 SLC6A18Q96N87 628 aa11.1□□□□□ -0.63
USP49-204ENST00000423567 ZNF599Q96NL3 588 aa11.1□□□□□ -0.63
USP49-204ENST00000423567 PANX2Q96RD6 677 aa11.1□□□□□ -0.63
USP49-204ENST00000423567 ZNF670Q9BS34 389 aa11.1□□□□□ -0.63
USP49-204ENST00000423567 GAREM1Q9H706 876 aa11.1□□□□□ -0.63
USP49-204ENST00000423567 PDFQ9HBH1 243 aa11.1□□□□□ -0.63
USP49-204ENST00000423567 IPO11Q9UI26 975 aaKnown RBP11.1□□□□□ -0.63
USP49-204ENST00000423567 ANKRD6Q9Y2G4 727 aa11.1□□□□□ -0.63
USP49-204ENST00000423567 MFHAS1Q9Y4C4 1052 aa11.1□□□□□ -0.63
USP49-204ENST00000423567 CEP250Q9BV73 2442 aa11.09□□□□□ -0.63
USP49-204ENST00000423567 A0A1W2PQU0 124 aa11.09□□□□□ -0.63
USP49-204ENST00000423567 C16orf96A6NNT2 1141 aa11.09□□□□□ -0.63
USP49-204ENST00000423567 SPOPO43791 374 aa11.09□□□□□ -0.63
USP49-204ENST00000423567 MAGEC1O60732 1142 aa11.09□□□□□ -0.63
USP49-204ENST00000423567 MTA2O94776 668 aa11.09□□□□□ -0.63
USP49-204ENST00000423567 CD38P28907 300 aa11.09□□□□□ -0.63
USP49-204ENST00000423567 GKP32189 559 aa11.09□□□□□ -0.63
USP49-204ENST00000423567 SLC1A1P43005 524 aa11.09□□□□□ -0.63
USP49-204ENST00000423567 NOP2P46087 812 aaKnown RBP11.09□□□□□ -0.63
USP49-204ENST00000423567 NOVA1P51513 510 aaKnown RBP11.09□□□□□ -0.63
USP49-204ENST00000423567 SLC14A1Q13336 389 aa11.09□□□□□ -0.63
USP49-204ENST00000423567 DPYSL3Q14195 570 aa11.09□□□□□ -0.63
USP49-204ENST00000423567 ZNF235Q14590 738 aa11.09□□□□□ -0.63
USP49-204ENST00000423567 STAT4Q14765 748 aa11.09□□□□□ -0.63
USP49-204ENST00000423567 CYTH1Q15438 398 aa11.09□□□□□ -0.63
USP49-204ENST00000423567 KIF19Q2TAC6 998 aa11.09□□□□□ -0.63
USP49-204ENST00000423567 HLA-BQ31612 363 aa11.09□□□□□ -0.63
USP49-204ENST00000423567 KIAA1161Q6NSJ0 714 aa11.09□□□□□ -0.63
USP49-204ENST00000423567 PARS2Q7L3T8 475 aaKnown RBP11.09□□□□□ -0.63
USP49-204ENST00000423567 HORMAD1Q86X24 394 aa11.09□□□□□ -0.63
USP49-204ENST00000423567 LRRC49Q8IUZ0 686 aa11.09□□□□□ -0.63
USP49-204ENST00000423567 ARHGAP12Q8IWW6 846 aa11.09□□□□□ -0.63
USP49-204ENST00000423567 NETO2Q8NC67 525 aa11.09□□□□□ -0.63
USP49-204ENST00000423567 FAM71BQ8TC56 605 aa11.09□□□□□ -0.63
USP49-204ENST00000423567 EXOC2Q96KP1 924 aa11.09□□□□□ -0.63
USP49-204ENST00000423567 KLHL32Q96NJ5 620 aa11.09□□□□□ -0.63
USP49-204ENST00000423567 CPEB1Q9BZB8 566 aaKnown RBP11.09□□□□□ -0.63
USP49-204ENST00000423567 DNAAF2Q9NVR5 837 aaKnown RBP11.09□□□□□ -0.63
USP49-204ENST00000423567 LHX3Q9UBR4 397 aa11.09□□□□□ -0.63
USP49-204ENST00000423567 SEPT3Q9UH03 358 aa11.09□□□□□ -0.63
USP49-204ENST00000423567 GON4LQ3T8J9 2241 aa11.08□□□□□ -0.64
USP49-204ENST00000423567 TNRC6BQ9UPQ9 1833 aaKnown RBP11.08□□□□□ -0.64
USP49-204ENST00000423567 PRAMEF26H0Y7S4 382 aa11.08□□□□□ -0.64
USP49-204ENST00000423567 TM4SF5O14894 197 aa11.08□□□□□ -0.64
USP49-204ENST00000423567 VILLO15195 856 aa11.08□□□□□ -0.64
USP49-204ENST00000423567 TSPAN6O43657 245 aa11.08□□□□□ -0.64
USP49-204ENST00000423567 AP1G1O43747 822 aa11.08□□□□□ -0.64
USP49-204ENST00000423567 DFNA5O60443 496 aa11.08□□□□□ -0.64
USP49-204ENST00000423567 KCNK5O95279 499 aa11.08□□□□□ -0.64
USP49-204ENST00000423567 LCA5LO95447 670 aa11.08□□□□□ -0.64
USP49-204ENST00000423567 ZNF883P0CG24 379 aa11.08□□□□□ -0.64
USP49-204ENST00000423567 CSRP1P21291 193 aaKnown RBP11.08□□□□□ -0.64
USP49-204ENST00000423567 AKT2P31751 481 aa11.08□□□□□ -0.64
USP49-204ENST00000423567 HSPA9P38646 679 aaKnown RBP11.08□□□□□ -0.64
USP49-204ENST00000423567 CSNK1DP48730 415 aa11.08□□□□□ -0.64
USP49-204ENST00000423567 SUOXP51687 545 aa11.08□□□□□ -0.64
USP49-204ENST00000423567 TAS2R38P59533 333 aa11.08□□□□□ -0.64
USP49-204ENST00000423567 TAS2R40P59535 323 aa11.08□□□□□ -0.64
USP49-204ENST00000423567 RPS21P63220 83 aaKnown RBP11.08□□□□□ -0.64
USP49-204ENST00000423567 OVGP1Q12889 678 aa11.08□□□□□ -0.64
USP49-204ENST00000423567 SGCGQ13326 291 aa11.08□□□□□ -0.64
USP49-204ENST00000423567 LBRQ14739 615 aaKnown RBP11.08□□□□□ -0.64
USP49-204ENST00000423567 SUZ12Q15022 739 aaKnown RBP11.08□□□□□ -0.64
USP49-204ENST00000423567 TCEAL1Q15170 157 aa11.08□□□□□ -0.64
USP49-204ENST00000423567 ATP13A4Q4VNC1 1196 aa11.08□□□□□ -0.64
USP49-204ENST00000423567 ANKRD20A8PQ5CZ79 823 aa11.08□□□□□ -0.64
USP49-204ENST00000423567 ARHGAP36Q6ZRI8 547 aa11.08□□□□□ -0.64
USP49-204ENST00000423567 SRLQ86TD4 932 aa11.08□□□□□ -0.64
USP49-204ENST00000423567 TTC7BQ86TV6 843 aa11.08□□□□□ -0.64
USP49-204ENST00000423567 OR2I1PQ8NGU4 316 aa11.08□□□□□ -0.64
USP49-204ENST00000423567 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.08□□□□□ -0.64
USP49-204ENST00000423567 HCAR2Q8TDS4 363 aa11.08□□□□□ -0.64
USP49-204ENST00000423567 TSC1Q92574 1164 aa11.08□□□□□ -0.64
USP49-204ENST00000423567 ZNF830Q96NB3 372 aaPredicted RBP11.08□□□□□ -0.64
USP49-204ENST00000423567 TUBGCP5Q96RT8 1024 aa11.08□□□□□ -0.64
USP49-204ENST00000423567 ORAI3Q9BRQ5 295 aa11.08□□□□□ -0.64
USP49-204ENST00000423567 MAK16Q9BXY0 300 aaKnown RBP11.08□□□□□ -0.64
USP49-204ENST00000423567 ATP13A3Q9H7F0 1226 aa11.08□□□□□ -0.64
USP49-204ENST00000423567 EBF2Q9HAK2 575 aa11.08□□□□□ -0.64
USP49-204ENST00000423567 ETNK2Q9NVF9 386 aa11.08□□□□□ -0.64
USP49-204ENST00000423567 KLHL11Q9NVR0 708 aa11.08□□□□□ -0.64
USP49-204ENST00000423567 HAUS2Q9NVX0 235 aa11.08□□□□□ -0.64
USP49-204ENST00000423567 DKK3Q9UBP4 350 aa11.08□□□□□ -0.64
USP49-204ENST00000423567 PCDHA13Q9Y5I0 950 aa11.08□□□□□ -0.64
USP49-204ENST00000423567 FADS3Q9Y5Q0 445 aa11.08□□□□□ -0.64
USP49-204ENST00000423567 SNX11Q9Y5W9 270 aa11.08□□□□□ -0.64
USP49-204ENST00000423567 SLCO1B1Q9Y6L6 691 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms