RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 SLC1A5Q15758 541 aa21.21■□□□□ 0.99
GPC1-202ENST00000420138 ELMSAN1Q6PJG2 1045 aa21.21■□□□□ 0.99
GPC1-202ENST00000420138 PACS1Q6VY07 963 aa21.21■□□□□ 0.99
GPC1-202ENST00000420138 CPLX4Q7Z7G2 160 aa21.21■□□□□ 0.99
GPC1-202ENST00000420138 SLC25A41Q8N5S1 370 aa21.21■□□□□ 0.99
GPC1-202ENST00000420138 CDKL2Q92772 493 aa21.21■□□□□ 0.99
GPC1-202ENST00000420138 ZSWIM3Q96MP5 696 aa21.21■□□□□ 0.99
GPC1-202ENST00000420138 ZNF317Q96PQ6 595 aaPredicted RBP21.21■□□□□ 0.99
GPC1-202ENST00000420138 MLXIPLQ9NP71 852 aa21.21■□□□□ 0.99
GPC1-202ENST00000420138 PRKAG3Q9UGI9 489 aa21.21■□□□□ 0.99
GPC1-202ENST00000420138 SMG5Q9UPR3 1016 aaKnown RBP21.21■□□□□ 0.99
GPC1-202ENST00000420138 TCAF1Q9Y4C2 921 aa21.21■□□□□ 0.99
GPC1-202ENST00000420138 ATXN2Q99700 1313 aaKnown RBP21.21■□□□□ 0.99
GPC1-202ENST00000420138 TYW5A2RUC4 315 aaKnown RBP21.2■□□□□ 0.98
GPC1-202ENST00000420138 SOBPA7XYQ1 873 aa21.2■□□□□ 0.98
GPC1-202ENST00000420138 GOLGA8RI6L899 631 aa21.2■□□□□ 0.98
GPC1-202ENST00000420138 RFPL1O75677 317 aa21.2■□□□□ 0.98
GPC1-202ENST00000420138 KRT37O76014 449 aa21.2■□□□□ 0.98
GPC1-202ENST00000420138 PRAMEF12O95522 483 aa21.2■□□□□ 0.98
GPC1-202ENST00000420138 MT-ND3P03897 115 aa21.2■□□□□ 0.98
GPC1-202ENST00000420138 RPA3P35244 121 aaPredicted RBP21.2■□□□□ 0.98
GPC1-202ENST00000420138 SLC18A2Q05940 514 aa21.2■□□□□ 0.98
GPC1-202ENST00000420138 MPPE1Q53F39 396 aa21.2■□□□□ 0.98
GPC1-202ENST00000420138 DDI1Q8WTU0 396 aa21.2■□□□□ 0.98
GPC1-202ENST00000420138 ATP2A3Q93084 1043 aa21.2■□□□□ 0.98
GPC1-202ENST00000420138 CINPQ9BW66 212 aaPredicted RBP21.2■□□□□ 0.98
GPC1-202ENST00000420138 NOD2Q9HC29 1040 aa21.2■□□□□ 0.98
GPC1-202ENST00000420138 MRM3Q9HC36 420 aaKnown RBP21.2■□□□□ 0.98
GPC1-202ENST00000420138 PLK2Q9NYY3 685 aa21.2■□□□□ 0.98
GPC1-202ENST00000420138 HELZP42694 1942 aaKnown RBP21.2■□□□□ 0.98
GPC1-202ENST00000420138 NOTCH4Q99466 2003 aa21.2■□□□□ 0.98
GPC1-202ENST00000420138 MYO9BQ13459 2157 aa21.2■□□□□ 0.98
GPC1-202ENST00000420138 PAPLNO95428 1278 aa21.2■□□□□ 0.98
GPC1-202ENST00000420138 NRIP1P48552 1158 aa21.2■□□□□ 0.98
GPC1-202ENST00000420138 CORO7P57737 925 aa21.2■□□□□ 0.98
GPC1-202ENST00000420138 CDH18Q13634 790 aa21.2■□□□□ 0.98
GPC1-202ENST00000420138 QPCTQ16769 361 aa21.2■□□□□ 0.98
GPC1-202ENST00000420138 ARHGAP15Q53QZ3 475 aa21.2■□□□□ 0.98
GPC1-202ENST00000420138 SIRPB2Q5JXA9 342 aa21.2■□□□□ 0.98
GPC1-202ENST00000420138 TEDDM1Q5T9Z0 273 aa21.2■□□□□ 0.98
GPC1-202ENST00000420138 FYB2Q5VWT5 728 aa21.2■□□□□ 0.98
GPC1-202ENST00000420138 LINGO4Q6UY18 593 aa21.2■□□□□ 0.98
GPC1-202ENST00000420138 TPGS1Q6ZTW0 290 aa21.2■□□□□ 0.98
GPC1-202ENST00000420138 RASSF3Q86WH2 238 aa21.2■□□□□ 0.98
GPC1-202ENST00000420138 MFN1Q8IWA4 741 aa21.2■□□□□ 0.98
GPC1-202ENST00000420138 APCDD1Q8J025 514 aa21.2■□□□□ 0.98
GPC1-202ENST00000420138 PTCD2Q8WV60 388 aaKnown RBP21.2■□□□□ 0.98
GPC1-202ENST00000420138 AGAP2Q99490 1192 aa21.2■□□□□ 0.98
GPC1-202ENST00000420138 TREX1Q9NSU2 369 aa21.2■□□□□ 0.98
GPC1-202ENST00000420138 TDP1Q9NUW8 608 aa21.2■□□□□ 0.98
GPC1-202ENST00000420138 ZFATQ9P243 1243 aa21.2■□□□□ 0.98
GPC1-202ENST00000420138 CCDC78A2IDD5 438 aa21.19■□□□□ 0.98
GPC1-202ENST00000420138 MYO1CO00159 1063 aa21.19■□□□□ 0.98
GPC1-202ENST00000420138 RFXAPO00287 272 aa21.19■□□□□ 0.98
GPC1-202ENST00000420138 ASMTLO95671 621 aa21.19■□□□□ 0.98
GPC1-202ENST00000420138 ADRA1DP25100 572 aa21.19■□□□□ 0.98
GPC1-202ENST00000420138 ARNTP27540 789 aa21.19■□□□□ 0.98
GPC1-202ENST00000420138 SERPINB9P50453 376 aa21.19■□□□□ 0.98
GPC1-202ENST00000420138 HSP90AA5PQ58FG0 334 aa21.19■□□□□ 0.98
GPC1-202ENST00000420138 ESRP1Q6NXG1 681 aaKnown RBP21.19■□□□□ 0.98
GPC1-202ENST00000420138 BBS5Q8N3I7 341 aa21.19■□□□□ 0.98
GPC1-202ENST00000420138 LMLNQ96KR4 655 aa21.19■□□□□ 0.98
GPC1-202ENST00000420138 TRIB3Q96RU7 358 aa21.19■□□□□ 0.98
GPC1-202ENST00000420138 SLC2A6Q9UGQ3 507 aa21.19■□□□□ 0.98
GPC1-202ENST00000420138 VPS51Q9UID3 782 aa21.19■□□□□ 0.98
GPC1-202ENST00000420138 VPS28Q9UK41 221 aa21.19■□□□□ 0.98
GPC1-202ENST00000420138 KRT38O76015 456 aa21.18■□□□□ 0.98
GPC1-202ENST00000420138 EPOP01588 193 aa21.18■□□□□ 0.98
GPC1-202ENST00000420138 ARCN1P48444 511 aaKnown RBP21.18■□□□□ 0.98
GPC1-202ENST00000420138 SERPINH1P50454 418 aaKnown RBP21.18■□□□□ 0.98
GPC1-202ENST00000420138 KCNC3Q14003 757 aa21.18■□□□□ 0.98
GPC1-202ENST00000420138 SLC14A2Q15849 920 aa21.18■□□□□ 0.98
GPC1-202ENST00000420138 DUSP6Q16828 381 aa21.18■□□□□ 0.98
GPC1-202ENST00000420138 LGSNQ5TDP6 509 aa21.18■□□□□ 0.98
GPC1-202ENST00000420138 MROH9Q5TGP6 573 aa21.18■□□□□ 0.98
GPC1-202ENST00000420138 GKAP1Q5VSY0 366 aaPredicted RBP21.18■□□□□ 0.98
GPC1-202ENST00000420138 CHRDL2Q6WN34 429 aa21.18■□□□□ 0.98
GPC1-202ENST00000420138 DCAF4L2Q8NA75 395 aa21.18■□□□□ 0.98
GPC1-202ENST00000420138 PPHLN1Q8NEY8 458 aaKnown RBP21.18■□□□□ 0.98
GPC1-202ENST00000420138 VN1R2Q8NFZ6 395 aa21.18■□□□□ 0.98
GPC1-202ENST00000420138 FIBINQ8TAL6 211 aa21.18■□□□□ 0.98
GPC1-202ENST00000420138 ALKBH8Q96BT7 664 aaKnown RBP21.18■□□□□ 0.98
GPC1-202ENST00000420138 MTBPQ96DY7 904 aa21.18■□□□□ 0.98
GPC1-202ENST00000420138 SGSM3Q96HU1 749 aa21.18■□□□□ 0.98
GPC1-202ENST00000420138 FEM1CQ96JP0 617 aa21.18■□□□□ 0.98
GPC1-202ENST00000420138 EXOC2Q96KP1 924 aa21.18■□□□□ 0.98
GPC1-202ENST00000420138 RANBP9Q96S59 729 aa21.18■□□□□ 0.98
GPC1-202ENST00000420138 MCMBPQ9BTE3 642 aa21.18■□□□□ 0.98
GPC1-202ENST00000420138 TMCC1O94876 653 aa21.18■□□□□ 0.98
GPC1-202ENST00000420138 PYGBP11216 843 aa21.18■□□□□ 0.98
GPC1-202ENST00000420138 CEBPBP17676 345 aa21.18■□□□□ 0.98
GPC1-202ENST00000420138 CDK18Q07002 472 aa21.18■□□□□ 0.98
GPC1-202ENST00000420138 LMAN2Q12907 356 aa21.18■□□□□ 0.98
GPC1-202ENST00000420138 ZNF77Q15935 545 aa21.18■□□□□ 0.98
GPC1-202ENST00000420138 INO80DQ53TQ3 878 aaPredicted RBP21.18■□□□□ 0.98
GPC1-202ENST00000420138 TIFABQ6ZNK6 161 aa21.18■□□□□ 0.98
GPC1-202ENST00000420138 KCNMB4Q86W47 210 aa21.18■□□□□ 0.98
GPC1-202ENST00000420138 C12orf76Q8N812 135 aaPredicted RBP21.18■□□□□ 0.98
GPC1-202ENST00000420138 DYDC1Q8WWB3 177 aa21.18■□□□□ 0.98
GPC1-202ENST00000420138 CKAP2Q8WWK9 683 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms