RNA–Protein interactions for RNA: ENST00000420121.5

SSBP3-206, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-206ENST00000420121 MYLK3Q32MK0 819 aa11.21□□□□□ -0.61
SSBP3-206ENST00000420121 INAVAQ3KP66 663 aa11.21□□□□□ -0.61
SSBP3-206ENST00000420121 ZNF805Q5CZA5 627 aa11.21□□□□□ -0.61
SSBP3-206ENST00000420121 TPRG1LQ5T0D9 272 aa11.21□□□□□ -0.61
SSBP3-206ENST00000420121 HGSNATQ68CP4 663 aa11.21□□□□□ -0.61
SSBP3-206ENST00000420121 KIAA1161Q6NSJ0 714 aa11.21□□□□□ -0.61
SSBP3-206ENST00000420121 DCUN1D2Q6PH85 259 aa11.21□□□□□ -0.61
SSBP3-206ENST00000420121 DHRS13Q6UX07 377 aa11.21□□□□□ -0.61
SSBP3-206ENST00000420121 KDM7AQ6ZMT4 941 aa11.21□□□□□ -0.61
SSBP3-206ENST00000420121 LRIG1Q96JA1 1093 aa11.21□□□□□ -0.61
SSBP3-206ENST00000420121 CNDP2Q96KP4 475 aaKnown RBP11.21□□□□□ -0.61
SSBP3-206ENST00000420121 C1QTNF2Q9BXJ5 285 aa11.21□□□□□ -0.61
SSBP3-206ENST00000420121 SLC17A9Q9BYT1 436 aa11.21□□□□□ -0.61
SSBP3-206ENST00000420121 RALYQ9UKM9 306 aaKnown RBP11.21□□□□□ -0.61
SSBP3-206ENST00000420121 ITM2BQ9Y287 266 aa11.21□□□□□ -0.61
SSBP3-206ENST00000420121 PCDHGA1Q9Y5H4 931 aa11.21□□□□□ -0.61
SSBP3-206ENST00000420121 HS3ST3A1Q9Y663 406 aa11.21□□□□□ -0.61
SSBP3-206ENST00000420121 SHROOM3Q8TF72 1996 aa11.21□□□□□ -0.62
SSBP3-206ENST00000420121 ASXL3Q9C0F0 2248 aa11.2□□□□□ -0.62
SSBP3-206ENST00000420121 FAM149AA5PLN7 773 aa11.2□□□□□ -0.62
SSBP3-206ENST00000420121 ZSCAN5CA6NGD5 496 aaPredicted RBP11.2□□□□□ -0.62
SSBP3-206ENST00000420121 KRIT1O00522 736 aa11.2□□□□□ -0.62
SSBP3-206ENST00000420121 TRIM38O00635 465 aa11.2□□□□□ -0.62
SSBP3-206ENST00000420121 INSIG1O15503 277 aa11.2□□□□□ -0.62
SSBP3-206ENST00000420121 BUB1O43683 1085 aa11.2□□□□□ -0.62
SSBP3-206ENST00000420121 POP4O95707 220 aaKnown RBP11.2□□□□□ -0.62
SSBP3-206ENST00000420121 LDOC1O95751 146 aaPredicted RBP11.2□□□□□ -0.62
SSBP3-206ENST00000420121 PAK4O96013 591 aaPredicted RBP11.2□□□□□ -0.62
SSBP3-206ENST00000420121 UGT2B4P06133 528 aa11.2□□□□□ -0.62
SSBP3-206ENST00000420121 PSMA2P25787 234 aa11.2□□□□□ -0.62
SSBP3-206ENST00000420121 AKT2P31751 481 aa11.2□□□□□ -0.62
SSBP3-206ENST00000420121 SNRPD1P62314 119 aaKnown RBP11.2□□□□□ -0.62
SSBP3-206ENST00000420121 RPS21P63220 83 aaKnown RBP11.2□□□□□ -0.62
SSBP3-206ENST00000420121 CYTH1Q15438 398 aa11.2□□□□□ -0.62
SSBP3-206ENST00000420121 PROX2Q3B8N5 592 aa11.2□□□□□ -0.62
SSBP3-206ENST00000420121 INO80DQ53TQ3 878 aaPredicted RBP11.2□□□□□ -0.62
SSBP3-206ENST00000420121 FIGNQ5HY92 759 aa11.2□□□□□ -0.62
SSBP3-206ENST00000420121 FBXL19Q6PCT2 694 aa11.2□□□□□ -0.62
SSBP3-206ENST00000420121 MDM1Q8TC05 714 aa11.2□□□□□ -0.62
SSBP3-206ENST00000420121 FNIP1Q8TF40 1166 aa11.2□□□□□ -0.62
SSBP3-206ENST00000420121 CASKIN2Q8WXE0 1202 aa11.2□□□□□ -0.62
SSBP3-206ENST00000420121 RAB7BQ96AH8 199 aa11.2□□□□□ -0.62
SSBP3-206ENST00000420121 KLHL32Q96NJ5 620 aa11.2□□□□□ -0.62
SSBP3-206ENST00000420121 KCTD15Q96SI1 283 aaPredicted RBP11.2□□□□□ -0.62
SSBP3-206ENST00000420121 EPAS1Q99814 870 aa11.2□□□□□ -0.62
SSBP3-206ENST00000420121 SNRNP25Q9BV90 132 aaKnown RBP11.2□□□□□ -0.62
SSBP3-206ENST00000420121 EDEM3Q9BZQ6 932 aa11.2□□□□□ -0.62
SSBP3-206ENST00000420121 ISCUQ9H1K1 167 aa11.2□□□□□ -0.62
SSBP3-206ENST00000420121 CBX8Q9HC52 389 aa11.2□□□□□ -0.62
SSBP3-206ENST00000420121 PARVAQ9NVD7 372 aa11.2□□□□□ -0.62
SSBP3-206ENST00000420121 KLHL11Q9NVR0 708 aa11.2□□□□□ -0.62
SSBP3-206ENST00000420121 UCKL1Q9NWZ5 548 aa11.2□□□□□ -0.62
SSBP3-206ENST00000420121 HPCAL4Q9UM19 191 aa11.2□□□□□ -0.62
SSBP3-206ENST00000420121 AP4E1Q9UPM8 1137 aa11.2□□□□□ -0.62
SSBP3-206ENST00000420121 MFHAS1Q9Y4C4 1052 aa11.2□□□□□ -0.62
SSBP3-206ENST00000420121 SYCE3A1L190 88 aa11.19□□□□□ -0.62
SSBP3-206ENST00000420121 ANKRD62A6NC57 917 aa11.19□□□□□ -0.62
SSBP3-206ENST00000420121 IGLON5A6NGN9 336 aa11.19□□□□□ -0.62
SSBP3-206ENST00000420121 J3KR12 359 aa11.19□□□□□ -0.62
SSBP3-206ENST00000420121 FGF10O15520 208 aaPredicted RBP11.19□□□□□ -0.62
SSBP3-206ENST00000420121 TSPAN6O43657 245 aa11.19□□□□□ -0.62
SSBP3-206ENST00000420121 LRCH4O75427 683 aa11.19□□□□□ -0.62
SSBP3-206ENST00000420121 RFPL3O75679 317 aa11.19□□□□□ -0.62
SSBP3-206ENST00000420121 PIAS2O75928 621 aa11.19□□□□□ -0.62
SSBP3-206ENST00000420121 FTLP02792 175 aaPredicted RBP11.19□□□□□ -0.62
SSBP3-206ENST00000420121 SKILP12757 684 aa11.19□□□□□ -0.62
SSBP3-206ENST00000420121 ITIH2P19823 946 aa11.19□□□□□ -0.62
SSBP3-206ENST00000420121 DGKAP23743 735 aa11.19□□□□□ -0.62
SSBP3-206ENST00000420121 MIPP30301 263 aa11.19□□□□□ -0.62
SSBP3-206ENST00000420121 HTR7P34969 479 aa11.19□□□□□ -0.62
SSBP3-206ENST00000420121 FZD2Q14332 565 aa11.19□□□□□ -0.62
SSBP3-206ENST00000420121 PARP15Q460N3 678 aa11.19□□□□□ -0.62
SSBP3-206ENST00000420121 FILIP1LQ4L180 1135 aa11.19□□□□□ -0.62
SSBP3-206ENST00000420121 CCDC157Q569K6 752 aa11.19□□□□□ -0.62
SSBP3-206ENST00000420121 LRRC73Q5JTD7 316 aa11.19□□□□□ -0.62
SSBP3-206ENST00000420121 AFMIDQ63HM1 303 aa11.19□□□□□ -0.62
SSBP3-206ENST00000420121 PPP1R2P3Q6NXS1 205 aa11.19□□□□□ -0.62
SSBP3-206ENST00000420121 GDPD4Q6W3E5 623 aa11.19□□□□□ -0.62
SSBP3-206ENST00000420121 KYAT3Q6YP21 454 aaKnown RBP11.19□□□□□ -0.62
SSBP3-206ENST00000420121 Q6ZSR6 202 aa11.19□□□□□ -0.62
SSBP3-206ENST00000420121 LUZP1Q86V48 1076 aa11.19□□□□□ -0.62
SSBP3-206ENST00000420121 ARHGAP12Q8IWW6 846 aa11.19□□□□□ -0.62
SSBP3-206ENST00000420121 GALNT15Q8N3T1 639 aa11.19□□□□□ -0.62
SSBP3-206ENST00000420121 RYBPQ8N488 228 aaPredicted RBP11.19□□□□□ -0.62
SSBP3-206ENST00000420121 NPWQ8N729 165 aa11.19□□□□□ -0.62
SSBP3-206ENST00000420121 ASB12Q8WXK4 309 aa11.19□□□□□ -0.62
SSBP3-206ENST00000420121 FEM1CQ96JP0 617 aa11.19□□□□□ -0.62
SSBP3-206ENST00000420121 EXOC2Q96KP1 924 aa11.19□□□□□ -0.62
SSBP3-206ENST00000420121 GDAP1L1Q96MZ0 367 aa11.19□□□□□ -0.62
SSBP3-206ENST00000420121 LENG8Q96PV6 779 aaPredicted RBP11.19□□□□□ -0.62
SSBP3-206ENST00000420121 CALN1Q9BXU9 219 aa11.19□□□□□ -0.62
SSBP3-206ENST00000420121 OSBPL1AQ9BXW6 950 aa11.19□□□□□ -0.62
SSBP3-206ENST00000420121 SLC39A8Q9C0K1 460 aa11.19□□□□□ -0.62
SSBP3-206ENST00000420121 CATSPERBQ9H7T0 1116 aa11.19□□□□□ -0.62
SSBP3-206ENST00000420121 DKK4Q9UBT3 224 aa11.19□□□□□ -0.62
SSBP3-206ENST00000420121 KLF15Q9UIH9 416 aa11.19□□□□□ -0.62
SSBP3-206ENST00000420121 PNMA8BQ9ULN7 279 aaPredicted RBP11.19□□□□□ -0.62
SSBP3-206ENST00000420121 LY6G6EA0A0G2JKS1 128 aa11.18□□□□□ -0.62
SSBP3-206ENST00000420121 SPTY2D1-AS1A0A0U1RR47 76 aa11.18□□□□□ -0.62
SSBP3-206ENST00000420121 TSPAN11A1L157 253 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms