RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 INPP4AQ96PE3 977 aaPredicted RBP4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 REEP2Q9BRK0 252 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 C17orf80Q9BSJ5 609 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 B3GNT5Q9BYG0 378 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 CIPCQ9C0C6 399 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 MRPL44Q9H9J2 332 aaKnown RBP4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 PARVGQ9HBI0 331 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 ANLNQ9NQW6 1124 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 TAB2Q9NYJ8 693 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 KCND2Q9NZV8 630 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 TBC1D7Q9P0N9 293 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 ODF2LQ9ULJ1 636 aa4.09□□□□□ -1.75
HMGB3P20-201ENST00000417997 CACNA1IQ9P0X4 2223 aa4.09□□□□□ -1.76
HMGB3P20-201ENST00000417997 LOC102724159A0A0B4J2E5 919 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 FRMD3A2A2Y4 597 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 ASB14A6NK59 587 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 RSPH10B2B2RC85 870 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 CES2O00748 559 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 TP73O15350 636 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 EIF3DO15371 548 aaKnown RBP eCLIP4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 PHGDHO43175 533 aaKnown RBP4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 RGS10O43665 173 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 CALUO43852 315 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 ATP9AO75110 1047 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 SLITRK3O94933 977 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 RASAL1O95294 804 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 LATS1O95835 1130 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 PGK2P07205 417 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 SUPT20HL2P0C7V6 817 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 RSPH10BP0C881 870 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 ZNF18P17022 549 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 UBA1P22314 1058 aaKnown RBP4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 MAPK4P31152 587 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 YWHABP31946 246 aaKnown RBP4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 ICAM3P32942 547 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 MMP13P45452 471 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 COPB1P53618 953 aaKnown RBP4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 EPHB1P54762 984 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 ACTR2P61160 394 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 PSMC6P62333 389 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 PRKCEQ02156 737 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 CNTN2Q02246 1040 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 SREBF2Q12772 1141 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 ALCAMQ13740 583 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 TRIM14Q14142 442 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 GIT2Q14161 759 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 NEDD9Q14511 834 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 PWP2Q15269 919 aaKnown RBP4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 KRT31Q15323 416 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 LRRC41Q15345 812 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 UGCGQ16739 394 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 FAM110CQ1W6H9 321 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 PTCHD3Q3KNS1 767 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 TCP11X2Q5H9J9 407 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 DNTTIP2Q5QJE6 756 aaKnown RBP4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 ODR4Q5SWX8 454 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 CACHD1Q5VU97 1274 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 MORN5Q5VZ52 161 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 PLA2G4FQ68DD2 849 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 RINT1Q6NUQ1 792 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 RGMBQ6NW40 437 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 TTI2Q6NXR4 508 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 B3GNT9Q6UX72 402 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 NPNTQ6UXI9 565 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 MAEAQ7L5Y9 396 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 EPM2AIP1Q7L775 607 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 OTUD6AQ7L8S5 288 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 DPP9Q86TI2 863 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 FBXO16Q8IX29 292 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 C4orf19Q8IY42 314 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 SYCP3Q8IZU3 236 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 MYCT1Q8N699 235 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 FAM133AQ8N9E0 248 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 TERB1Q8NA31 727 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 DNAJC19Q96DA6 116 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 LENG8Q96PV6 779 aaPredicted RBP4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 HSD17B14Q9BPX1 270 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 SENP7Q9BQF6 1050 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 TIPINQ9BVW5 301 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 CDH19Q9H159 772 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 PORCNQ9H237 461 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 VPS16Q9H269 839 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 MLXIPQ9HAP2 919 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 TXNRD2Q9NNW7 524 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 ZCCHC17Q9NP64 241 aaKnown RBP4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 ZNF302Q9NR11 478 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 PDGFCQ9NRA1 345 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 SAMSN1Q9NSI8 373 aaKnown RBP4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 ANKEF1Q9NU02 776 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 LARSQ9P2J5 1176 aaKnown RBP4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 MORF4L1Q9UBU8 362 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 SEL1LQ9UBV2 794 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 LIMA1Q9UHB6 759 aaKnown RBP4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 ABT1Q9ULW3 272 aaKnown RBP4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 IGSF9BQ9UPX0 1349 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 PCDHA10Q9Y5I2 948 aa4.08□□□□□ -1.76
HMGB3P20-201ENST00000417997 CASP8AP2Q9UKL3 1982 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 ASTN1O14525 1302 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 ITIH6Q6UXX5 1313 aa4.07□□□□□ -1.76
HMGB3P20-201ENST00000417997 SMIM35A0A1B0GVV1 85 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms