RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 ARMC8Q8IUR7 673 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 UCMAQ8WVF2 138 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 TLR8Q9NR97 1041 aaKnown RBP12.15□□□□□ -0.46
UBR4-205ENST00000417040 KLHL28Q9NXS3 571 aa12.15□□□□□ -0.46
UBR4-205ENST00000417040 WBP11Q9Y2W2 641 aaKnown RBP12.15□□□□□ -0.46
UBR4-205ENST00000417040 hCG_1818297A0A087WSY0 165 aa12.15□□□□□ -0.47
UBR4-205ENST00000417040 A0A0A0MRY4 1105 aa12.15□□□□□ -0.47
UBR4-205ENST00000417040 GPR182O15218 404 aa12.15□□□□□ -0.47
UBR4-205ENST00000417040 NUDT14O95848 222 aa12.15□□□□□ -0.47
UBR4-205ENST00000417040 ITGA3P26006 1051 aa12.15□□□□□ -0.47
UBR4-205ENST00000417040 RTP1P59025 263 aa12.15□□□□□ -0.47
UBR4-205ENST00000417040 FAM187BQ17R55 369 aa12.15□□□□□ -0.47
UBR4-205ENST00000417040 NEPROQ6NW34 567 aa12.15□□□□□ -0.47
UBR4-205ENST00000417040 CLIP4Q8N3C7 705 aa12.15□□□□□ -0.47
UBR4-205ENST00000417040 CLHC1Q8NHS4 586 aa12.15□□□□□ -0.47
UBR4-205ENST00000417040 SPATA13Q96N96 652 aa12.15□□□□□ -0.47
UBR4-205ENST00000417040 FAM210AQ96ND0 272 aa12.15□□□□□ -0.47
UBR4-205ENST00000417040 PDCD2LQ9BRP1 358 aa12.15□□□□□ -0.47
UBR4-205ENST00000417040 ULBP1Q9BZM6 244 aa12.15□□□□□ -0.47
UBR4-205ENST00000417040 XPR1Q9UBH6 696 aa12.15□□□□□ -0.47
UBR4-205ENST00000417040 ZNHIT2Q9UHR6 403 aa12.15□□□□□ -0.47
UBR4-205ENST00000417040 POLR3HQ9Y535 204 aaPredicted RBP12.15□□□□□ -0.47
UBR4-205ENST00000417040 PCDH8O95206 1070 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 C9P02748 559 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 ZNF7P17097 686 aaPredicted RBP12.14□□□□□ -0.47
UBR4-205ENST00000417040 HOXD10P28358 340 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 PURAQ00577 322 aaKnown RBP12.14□□□□□ -0.47
UBR4-205ENST00000417040 EPS8Q12929 822 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 SLC15A2Q16348 729 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 PCID2Q5JVF3 399 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 MYDGFQ969H8 173 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 MRPL48Q96GC5 212 aaKnown RBP12.14□□□□□ -0.47
UBR4-205ENST00000417040 GMCL1Q96IK5 515 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 COLEC11Q9BWP8 271 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 NFKBIZQ9BYH8 718 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 EBF3Q9H4W6 596 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 TMPRSS4Q9NRS4 437 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 ACTL7BQ9Y614 415 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 SIGLEC16A6NMB1 481 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 SNAP91O60641 907 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 FOSL2P15408 326 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 RENBPP51606 427 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 RAB10P61026 200 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 LIPMQ5VYY2 423 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 IRF2BP2Q7Z5L9 587 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 PQLC1Q8N2U9 271 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 SFRP1Q8N474 314 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 PNPT1Q8TCS8 783 aaKnown RBP12.14□□□□□ -0.47
UBR4-205ENST00000417040 ALG3Q92685 438 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 BORCS5Q969J3 196 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 CMTM6Q9NX76 183 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 KCNH4Q9UQ05 1017 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 SH3GLB1Q9Y371 365 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 STON1Q9Y6Q2 735 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 DEPDC5O75140 1603 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 LYNP07948 512 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 ALDH4A1P30038 563 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 DLG2Q15700 870 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 KHDC1Q4VXA5 237 aaKnown RBP12.14□□□□□ -0.47
UBR4-205ENST00000417040 SLC39A12Q504Y0 691 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 ARHGAP15Q53QZ3 475 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 KRT74Q7RTS7 529 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 COL26A1Q96A83 441 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 TMEM159Q96B96 161 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 FGFBP2Q9BYJ0 223 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 SLITRK2Q9H156 845 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 ARHGAP28Q9P2N2 729 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 PTPRMP28827 1452 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 ABHD2P08910 425 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 CCDC157Q569K6 752 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 PPM1JQ5JR12 505 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 RALGPS1Q5JS13 557 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 SDE2Q6IQ49 451 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 TP53INP1Q96A56 240 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 DMRTB1Q96MA1 342 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 DENND2DQ9H6A0 471 aaPredicted RBP12.14□□□□□ -0.47
UBR4-205ENST00000417040 CEMIPQ8WUJ3 1361 aa12.14□□□□□ -0.47
UBR4-205ENST00000417040 CYP1A1P04798 512 aaPredicted RBP12.13□□□□□ -0.47
UBR4-205ENST00000417040 MTHFRP42898 656 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 AQP4P55087 323 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 CDH13P55290 713 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 IL2P60568 153 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 MAPKAPK3Q16644 382 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 FBXO48Q5FWF7 155 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 ATAD3BQ5T9A4 648 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 OGFOD2Q6N063 350 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 C1orf186Q6ZWK4 172 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 CLNKQ7Z7G1 428 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 ZFPM1Q8IX07 1006 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 AMER2Q8N7J2 671 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 S100ZQ8WXG8 99 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 LRTOMTQ8WZ04 291 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 TBCBQ99426 244 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 RTKNQ9BST9 563 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 PRKD2Q9BZL6 878 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 MROH8Q9H579 483 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 RAP2CQ9Y3L5 183 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 DLC1Q96QB1 1528 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 CCDC189A1A4V9 331 aa12.13□□□□□ -0.47
UBR4-205ENST00000417040 KCNU1A8MYU2 1149 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms