RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 OXNAD1Q96HP4 312 aaPredicted RBP12.08□□□□□ -0.48
PTPRF-205ENST00000414879 PPP3R2Q96LZ3 170 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 APOBEC3GQ9HC16 384 aaKnown RBP12.08□□□□□ -0.48
PTPRF-205ENST00000414879 TXNRD2Q9NNW7 524 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 ANLNQ9NQW6 1124 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 NDUFA13Q9P0J0 144 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 TMEM216Q9P0N5 145 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 PSME2Q9UL46 239 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 ADAMTS5Q9UNA0 930 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 COL5A3P25940 1745 aaPredicted RBP12.08□□□□□ -0.48
PTPRF-205ENST00000414879 PSMD12O00232 456 aaPredicted RBP12.08□□□□□ -0.48
PTPRF-205ENST00000414879 AP2A1O95782 977 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 ALBP02768 609 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 LBPP18428 481 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 PBLDP30039 288 aaPredicted RBP12.08□□□□□ -0.48
PTPRF-205ENST00000414879 CORO1AP31146 461 aaKnown RBP12.08□□□□□ -0.48
PTPRF-205ENST00000414879 MMRN1Q13201 1228 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 TTC7BQ86TV6 843 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 DNAJC9Q8WXX5 260 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 CCT7Q99832 543 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 HGH1Q9BTY7 390 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 OSBPL2Q9H1P3 480 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 SYNDIG1Q9H7V2 258 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 GOLGA2P5Q9HBQ8 144 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 CFAP97Q9P2B7 532 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 RABGEF1Q9UJ41 708 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 CROTQ9UKG9 612 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 LRP5O75197 1615 aa12.08□□□□□ -0.48
PTPRF-205ENST00000414879 MYH2Q9UKX2 1941 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.07□□□□□ -0.48
PTPRF-205ENST00000414879 TPP1O14773 563 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 ZSCAN5DPP0CG00 497 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 GABRB2P47870 512 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 PDK4Q16654 411 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 ZCCHC8Q6NZY4 707 aaKnown RBP12.07□□□□□ -0.48
PTPRF-205ENST00000414879 LPCAT2Q7L5N7 544 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 NPLOC4Q8TAT6 608 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 INPP5DQ92835 1189 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 FAM120BQ96EK7 910 aaKnown RBP12.07□□□□□ -0.48
PTPRF-205ENST00000414879 RMDN2Q96LZ7 410 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 LGMNQ99538 433 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 CCDC90BQ9GZT6 254 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 MAFFQ9ULX9 164 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.07□□□□□ -0.48
PTPRF-205ENST00000414879 ZNF487B1APH4 448 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 VNN1O95497 513 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 ITGA2BP08514 1039 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 PCNAP12004 261 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 SLC2A4P14672 509 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 GPR1P46091 355 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 FPGSQ05932 587 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 ACTN3Q08043 901 aaPredicted RBP12.07□□□□□ -0.48
PTPRF-205ENST00000414879 TCEAL1Q15170 157 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 DPYSL2Q16555 572 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 ICE2Q659A1 982 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 SLC22A17Q8WUG5 538 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 MRPL48Q96GC5 212 aaKnown RBP12.07□□□□□ -0.48
PTPRF-205ENST00000414879 C8orf48Q96LL4 319 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 CEP44Q9C0F1 390 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 POMKQ9H5K3 350 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 URADA6NGE7 173 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 RPP40O75818 363 aaKnown RBP12.07□□□□□ -0.48
PTPRF-205ENST00000414879 EPB42P16452 691 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 CHRNB2P17787 502 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 GPD2P43304 727 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 MAGEA11P43364 429 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 INCA1Q0VD86 236 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 CYP1B1Q16678 543 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 AGKQ53H12 422 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 SAMD4BQ5PRF9 694 aaKnown RBP12.07□□□□□ -0.48
PTPRF-205ENST00000414879 CTU1Q7Z7A3 348 aaKnown RBP12.07□□□□□ -0.48
PTPRF-205ENST00000414879 MTDHQ86UE4 582 aaKnown RBP12.07□□□□□ -0.48
PTPRF-205ENST00000414879 MPP5Q8N3R9 675 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 ATAD1Q8NBU5 361 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 RFWD2Q8NHY2 731 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 KCTD15Q96SI1 283 aaPredicted RBP12.07□□□□□ -0.48
PTPRF-205ENST00000414879 WRAP73Q9P2S5 460 aaPredicted RBP12.07□□□□□ -0.48
PTPRF-205ENST00000414879 SFMBT1Q9UHJ3 866 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 TLR6Q9Y2C9 796 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 BTAF1O14981 1849 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 C1orf232A0A0U1RR37 186 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 SLC28A1O00337 649 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 SP2Q02086 613 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 GNA12Q03113 381 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 BTKQ06187 659 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 DYNC1I2Q13409 638 aaKnown RBP12.07□□□□□ -0.48
PTPRF-205ENST00000414879 RALGPS1Q5JS13 557 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 ZNF572Q7Z3I7 529 aaPredicted RBP12.07□□□□□ -0.48
PTPRF-205ENST00000414879 OVCA2Q8WZ82 227 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 DLG3Q92796 817 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 SAMD11Q96NU1 681 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 SDCBP2Q9H190 292 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 ELAC1Q9H777 363 aaKnown RBP12.07□□□□□ -0.48
PTPRF-205ENST00000414879 IGSF9Q9P2J2 1179 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 GGT7Q9UJ14 662 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 ADGRA3Q8IWK6 1321 aa12.07□□□□□ -0.48
PTPRF-205ENST00000414879 RASSF10A6NK89 507 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 SLC38A8A6NNN8 435 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 CCNDBP1O95273 360 aa12.06□□□□□ -0.48
PTPRF-205ENST00000414879 OTCP00480 354 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms