RNA–Protein interactions for RNA: ENST00000414220.2

CHD1-202, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-202ENST00000414220 ZNF641Q96N77 438 aaPredicted RBP14.91□□□□□ -0.02
CHD1-202ENST00000414220 KLHL32Q96NJ5 620 aa14.91□□□□□ -0.02
CHD1-202ENST00000414220 RNF157Q96PX1 679 aa14.91□□□□□ -0.02
CHD1-202ENST00000414220 ATP13A3Q9H7F0 1226 aa14.91□□□□□ -0.02
CHD1-202ENST00000414220 AASDHPPTQ9NRN7 309 aa14.91□□□□□ -0.02
CHD1-202ENST00000414220 ETNK2Q9NVF9 386 aa14.91□□□□□ -0.02
CHD1-202ENST00000414220 KLHL11Q9NVR0 708 aa14.91□□□□□ -0.02
CHD1-202ENST00000414220 VPS13AQ96RL7 3174 aa14.91□□□□□ -0.02
CHD1-202ENST00000414220 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.9□□□□□ -0.02
CHD1-202ENST00000414220 A0A1W2PQ67 120 aa14.9□□□□□ -0.02
CHD1-202ENST00000414220 C16orf96A6NNT2 1141 aa14.9□□□□□ -0.02
CHD1-202ENST00000414220 PLK4O00444 970 aa14.9□□□□□ -0.02
CHD1-202ENST00000414220 APOL1O14791 398 aa14.9□□□□□ -0.02
CHD1-202ENST00000414220 SLC30A4O14863 429 aa14.9□□□□□ -0.02
CHD1-202ENST00000414220 TSPAN6O43657 245 aa14.9□□□□□ -0.02
CHD1-202ENST00000414220 AP1G1O43747 822 aa14.9□□□□□ -0.02
CHD1-202ENST00000414220 ZRANB2O95218 330 aaKnown RBP eCLIP14.9□□□□□ -0.02
CHD1-202ENST00000414220 IGHV4-34P06331 123 aa14.9□□□□□ -0.02
CHD1-202ENST00000414220 ADRB3P13945 408 aa14.9□□□□□ -0.02
CHD1-202ENST00000414220 GRIA4P48058 902 aa14.9□□□□□ -0.02
CHD1-202ENST00000414220 AP1S1P61966 158 aa14.9□□□□□ -0.02
CHD1-202ENST00000414220 POLR2LP62875 67 aaKnown RBP14.9□□□□□ -0.02
CHD1-202ENST00000414220 BCL2L1Q07817 233 aa14.9□□□□□ -0.02
CHD1-202ENST00000414220 STAT4Q14765 748 aa14.9□□□□□ -0.02
CHD1-202ENST00000414220 RALGPS1Q5JS13 557 aa14.9□□□□□ -0.02
CHD1-202ENST00000414220 PIP5KL1Q5T9C9 394 aa14.9□□□□□ -0.02
CHD1-202ENST00000414220 NCBP2-AS2Q69YL0 99 aa14.9□□□□□ -0.02
CHD1-202ENST00000414220 KIAA1161Q6NSJ0 714 aa14.9□□□□□ -0.02
CHD1-202ENST00000414220 SRLQ86TD4 932 aa14.9□□□□□ -0.02
CHD1-202ENST00000414220 RFX6Q8HWS3 928 aa14.9□□□□□ -0.02
CHD1-202ENST00000414220 RCOR2Q8IZ40 523 aa14.9□□□□□ -0.02
CHD1-202ENST00000414220 SYCE1Q8N0S2 351 aa14.9□□□□□ -0.02
CHD1-202ENST00000414220 PCDH19Q8TAB3 1148 aa14.9□□□□□ -0.02
CHD1-202ENST00000414220 KIAA1524Q8TCG1 905 aa14.9□□□□□ -0.02
CHD1-202ENST00000414220 RAPGEF5Q92565 580 aa14.9□□□□□ -0.02
CHD1-202ENST00000414220 FAF2Q96CS3 445 aa14.9□□□□□ -0.02
CHD1-202ENST00000414220 SERAC1Q96JX3 654 aa14.9□□□□□ -0.02
CHD1-202ENST00000414220 EXOC2Q96KP1 924 aa14.9□□□□□ -0.02
CHD1-202ENST00000414220 PSKH2Q96QS6 385 aa14.9□□□□□ -0.02
CHD1-202ENST00000414220 SUV39H2Q9H5I1 410 aa14.9□□□□□ -0.02
CHD1-202ENST00000414220 CAPN10Q9HC96 672 aa14.9□□□□□ -0.02
CHD1-202ENST00000414220 TM9SF3Q9HD45 589 aa14.9□□□□□ -0.02
CHD1-202ENST00000414220 DKK3Q9UBP4 350 aa14.9□□□□□ -0.02
CHD1-202ENST00000414220 LHX3Q9UBR4 397 aa14.9□□□□□ -0.02
CHD1-202ENST00000414220 C4orf47A7E2U8 309 aa14.89□□□□□ -0.03
CHD1-202ENST00000414220 PJA2O43164 708 aa14.89□□□□□ -0.03
CHD1-202ENST00000414220 GDF9O60383 454 aa14.89□□□□□ -0.03
CHD1-202ENST00000414220 MAFKO60675 156 aa14.89□□□□□ -0.03
CHD1-202ENST00000414220 OPHN1O60890 802 aa14.89□□□□□ -0.03
CHD1-202ENST00000414220 CER1O95813 267 aa14.89□□□□□ -0.03
CHD1-202ENST00000414220 CES1P23141 567 aa14.89□□□□□ -0.03
CHD1-202ENST00000414220 CCNCP24863 283 aa14.89□□□□□ -0.03
CHD1-202ENST00000414220 GKP32189 559 aa14.89□□□□□ -0.03
CHD1-202ENST00000414220 GARSP41250 739 aaKnown RBP14.89□□□□□ -0.03
CHD1-202ENST00000414220 MMP13P45452 471 aa14.89□□□□□ -0.03
CHD1-202ENST00000414220 SCNN1BP51168 640 aa14.89□□□□□ -0.03
CHD1-202ENST00000414220 METAP1P53582 386 aa14.89□□□□□ -0.03
CHD1-202ENST00000414220 RPS21P63220 83 aaKnown RBP14.89□□□□□ -0.03
CHD1-202ENST00000414220 ELP6Q0PNE2 266 aa14.89□□□□□ -0.03
CHD1-202ENST00000414220 GALNT2Q10471 571 aa14.89□□□□□ -0.03
CHD1-202ENST00000414220 SGCGQ13326 291 aa14.89□□□□□ -0.03
CHD1-202ENST00000414220 HNRNPDQ14103 355 aaKnown RBP14.89□□□□□ -0.03
CHD1-202ENST00000414220 NAPEPLDQ6IQ20 393 aa14.89□□□□□ -0.03
CHD1-202ENST00000414220 ERAP2Q6P179 960 aa14.89□□□□□ -0.03
CHD1-202ENST00000414220 BRAT1Q6PJG6 821 aa14.89□□□□□ -0.03
CHD1-202ENST00000414220 ARHGAP36Q6ZRI8 547 aa14.89□□□□□ -0.03
CHD1-202ENST00000414220 HORMAD1Q86X24 394 aa14.89□□□□□ -0.03
CHD1-202ENST00000414220 CPNE8Q86YQ8 564 aa14.89□□□□□ -0.03
CHD1-202ENST00000414220 CCDC50Q8IVM0 306 aa14.89□□□□□ -0.03
CHD1-202ENST00000414220 TSEN2Q8NCE0 465 aaKnown RBP14.89□□□□□ -0.03
CHD1-202ENST00000414220 CCNYQ8ND76 341 aa14.89□□□□□ -0.03
CHD1-202ENST00000414220 ACRBPQ8NEB7 543 aa14.89□□□□□ -0.03
CHD1-202ENST00000414220 TPCN2Q8NHX9 752 aa14.89□□□□□ -0.03
CHD1-202ENST00000414220 FAM174AQ8TBP5 190 aa14.89□□□□□ -0.03
CHD1-202ENST00000414220 RNF25Q96BH1 459 aaPredicted RBP14.89□□□□□ -0.03
CHD1-202ENST00000414220 RBM41Q96IZ5 413 aaKnown RBP14.89□□□□□ -0.03
CHD1-202ENST00000414220 TSGA10Q9BZW7 698 aa14.89□□□□□ -0.03
CHD1-202ENST00000414220 DLL3Q9NYJ7 618 aa14.89□□□□□ -0.03
CHD1-202ENST00000414220 AMACRQ9UHK6 382 aa14.89□□□□□ -0.03
CHD1-202ENST00000414220 RALGAPA1Q6GYQ0 2036 aa14.88□□□□□ -0.03
CHD1-202ENST00000414220 A0A1W2PQU0 124 aa14.88□□□□□ -0.03
CHD1-202ENST00000414220 PRAMEF26H0Y7S4 382 aa14.88□□□□□ -0.03
CHD1-202ENST00000414220 PPP1R12AO14974 1030 aaPredicted RBP14.88□□□□□ -0.03
CHD1-202ENST00000414220 ARHGAP6O43182 974 aa14.88□□□□□ -0.03
CHD1-202ENST00000414220 LATO43561 262 aa14.88□□□□□ -0.03
CHD1-202ENST00000414220 DFNA5O60443 496 aa14.88□□□□□ -0.03
CHD1-202ENST00000414220 KRT10P13645 584 aa14.88□□□□□ -0.03
CHD1-202ENST00000414220 CD38P28907 300 aa14.88□□□□□ -0.03
CHD1-202ENST00000414220 MAT2AP31153 395 aaKnown RBP14.88□□□□□ -0.03
CHD1-202ENST00000414220 AKT2P31751 481 aa14.88□□□□□ -0.03
CHD1-202ENST00000414220 ITKQ08881 620 aa14.88□□□□□ -0.03
CHD1-202ENST00000414220 SLC10A7Q0GE19 358 aa14.88□□□□□ -0.03
CHD1-202ENST00000414220 OVGP1Q12889 678 aa14.88□□□□□ -0.03
CHD1-202ENST00000414220 PDK1Q15118 436 aa14.88□□□□□ -0.03
CHD1-202ENST00000414220 UAP1L1Q3KQV9 507 aa14.88□□□□□ -0.03
CHD1-202ENST00000414220 PARS2Q7L3T8 475 aaKnown RBP14.88□□□□□ -0.03
CHD1-202ENST00000414220 NDUFAF2Q8N183 169 aa14.88□□□□□ -0.03
CHD1-202ENST00000414220 NETO2Q8NC67 525 aa14.88□□□□□ -0.03
CHD1-202ENST00000414220 CXorf40AQ8TE69 158 aa14.88□□□□□ -0.03
CHD1-202ENST00000414220 UBE2Q2Q8WVN8 375 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms