RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 HLA-BQ31612 363 aa13.32□□□□□ -0.28
SSB-203ENST00000413002 ANKRD20A8PQ5CZ79 823 aa13.32□□□□□ -0.28
SSB-203ENST00000413002 ZNF805Q5CZA5 627 aa13.32□□□□□ -0.28
SSB-203ENST00000413002 PPM1JQ5JR12 505 aa13.32□□□□□ -0.28
SSB-203ENST00000413002 PRPF39Q86UA1 669 aaKnown RBP13.32□□□□□ -0.28
SSB-203ENST00000413002 LZTR1Q8N653 840 aa13.32□□□□□ -0.28
SSB-203ENST00000413002 FAM71BQ8TC56 605 aa13.32□□□□□ -0.28
SSB-203ENST00000413002 CASKIN2Q8WXE0 1202 aa13.32□□□□□ -0.28
SSB-203ENST00000413002 NSMCE3Q96MG7 304 aa13.32□□□□□ -0.28
SSB-203ENST00000413002 CINPQ9BW66 212 aaPredicted RBP13.32□□□□□ -0.28
SSB-203ENST00000413002 GAREM1Q9H706 876 aa13.32□□□□□ -0.28
SSB-203ENST00000413002 FZD3Q9NPG1 666 aa13.32□□□□□ -0.28
SSB-203ENST00000413002 INTUQ9ULD6 942 aa13.32□□□□□ -0.28
SSB-203ENST00000413002 ZFR2Q9UPR6 939 aaKnown RBP13.32□□□□□ -0.28
SSB-203ENST00000413002 EPN1Q9Y6I3 576 aaPredicted RBP13.32□□□□□ -0.28
SSB-203ENST00000413002 CHD5Q8TDI0 1954 aa13.32□□□□□ -0.28
SSB-203ENST00000413002 PCDH15Q96QU1 1955 aa13.31□□□□□ -0.28
SSB-203ENST00000413002 LRRD1A4D1F6 860 aa13.31□□□□□ -0.28
SSB-203ENST00000413002 SPINT1O43278 529 aa13.31□□□□□ -0.28
SSB-203ENST00000413002 LATO43561 262 aa13.31□□□□□ -0.28
SSB-203ENST00000413002 MAFKO60675 156 aa13.31□□□□□ -0.28
SSB-203ENST00000413002 OPHN1O60890 802 aa13.31□□□□□ -0.28
SSB-203ENST00000413002 NDUFA10O95299 355 aa13.31□□□□□ -0.28
SSB-203ENST00000413002 LCA5LO95447 670 aa13.31□□□□□ -0.28
SSB-203ENST00000413002 PRKCGP05129 697 aa13.31□□□□□ -0.28
SSB-203ENST00000413002 KRT7P08729 469 aa13.31□□□□□ -0.28
SSB-203ENST00000413002 COMTP21964 271 aa13.31□□□□□ -0.28
SSB-203ENST00000413002 KDELR1P24390 212 aa13.31□□□□□ -0.28
SSB-203ENST00000413002 CYLC1P35663 651 aaPredicted RBP13.31□□□□□ -0.28
SSB-203ENST00000413002 ARHGAP25P42331 645 aa13.31□□□□□ -0.28
SSB-203ENST00000413002 RACK1P63244 317 aaKnown RBP13.31□□□□□ -0.28
SSB-203ENST00000413002 IL10RBQ08334 325 aa13.31□□□□□ -0.28
SSB-203ENST00000413002 LBRQ14739 615 aaKnown RBP13.31□□□□□ -0.28
SSB-203ENST00000413002 PDK2Q15119 407 aa13.31□□□□□ -0.28
SSB-203ENST00000413002 LLGL1Q15334 1064 aa13.31□□□□□ -0.28
SSB-203ENST00000413002 TEAD4Q15561 434 aa13.31□□□□□ -0.28
SSB-203ENST00000413002 ZNF284Q2VY69 593 aa13.31□□□□□ -0.28
SSB-203ENST00000413002 NCBP2-AS2Q69YL0 99 aa13.31□□□□□ -0.28
SSB-203ENST00000413002 SRLQ86TD4 932 aa13.31□□□□□ -0.28
SSB-203ENST00000413002 TTC7BQ86TV6 843 aa13.31□□□□□ -0.28
SSB-203ENST00000413002 TRIM69Q86WT6 500 aa13.31□□□□□ -0.28
SSB-203ENST00000413002 CAMK1DQ8IU85 385 aa13.31□□□□□ -0.28
SSB-203ENST00000413002 CCDC170Q8IYT3 715 aa13.31□□□□□ -0.28
SSB-203ENST00000413002 ATPAF2Q8N5M1 289 aa13.31□□□□□ -0.28
SSB-203ENST00000413002 PQLC3Q8N755 202 aa13.31□□□□□ -0.28
SSB-203ENST00000413002 ACRBPQ8NEB7 543 aa13.31□□□□□ -0.28
SSB-203ENST00000413002 DEFB124Q8NES8 71 aa13.31□□□□□ -0.28
SSB-203ENST00000413002 RNF25Q96BH1 459 aaPredicted RBP13.31□□□□□ -0.28
SSB-203ENST00000413002 KDM4CQ9H3R0 1056 aa13.31□□□□□ -0.28
SSB-203ENST00000413002 PREBQ9HCU5 417 aa13.31□□□□□ -0.28
SSB-203ENST00000413002 SALL4Q9UJQ4 1053 aa13.31□□□□□ -0.28
SSB-203ENST00000413002 FNDC3AQ9Y2H6 1198 aaKnown RBP13.31□□□□□ -0.28
SSB-203ENST00000413002 REXO2Q9Y3B8 237 aaKnown RBP13.31□□□□□ -0.28
SSB-203ENST00000413002 FADS3Q9Y5Q0 445 aa13.31□□□□□ -0.28
SSB-203ENST00000413002 DUSP10Q9Y6W6 482 aa13.31□□□□□ -0.28
SSB-203ENST00000413002 CACNA1AO00555 2505 aa13.3□□□□□ -0.28
SSB-203ENST00000413002 A0A1W2PR77 199 aa13.3□□□□□ -0.28
SSB-203ENST00000413002 H0Y8X5 98 aa13.3□□□□□ -0.28
SSB-203ENST00000413002 NEMP1O14524 444 aa13.3□□□□□ -0.28
SSB-203ENST00000413002 SPOPO43791 374 aa13.3□□□□□ -0.28
SSB-203ENST00000413002 PEX11BO96011 259 aa13.3□□□□□ -0.28
SSB-203ENST00000413002 KRT1P04264 644 aa13.3□□□□□ -0.28
SSB-203ENST00000413002 CD59P13987 128 aa13.3□□□□□ -0.28
SSB-203ENST00000413002 TIMP2P16035 220 aa13.3□□□□□ -0.28
SSB-203ENST00000413002 FECHP22830 423 aa13.3□□□□□ -0.28
SSB-203ENST00000413002 CD38P28907 300 aa13.3□□□□□ -0.28
SSB-203ENST00000413002 GRIA4P48058 902 aa13.3□□□□□ -0.28
SSB-203ENST00000413002 SCNN1BP51168 640 aa13.3□□□□□ -0.28
SSB-203ENST00000413002 NOVA1P51513 510 aaKnown RBP13.3□□□□□ -0.28
SSB-203ENST00000413002 C21orf59P57076 290 aa13.3□□□□□ -0.28
SSB-203ENST00000413002 CLDN2P57739 230 aa13.3□□□□□ -0.28
SSB-203ENST00000413002 MAXP61244 160 aa13.3□□□□□ -0.28
SSB-203ENST00000413002 IL9RQ01113 521 aa13.3□□□□□ -0.28
SSB-203ENST00000413002 GBE1Q04446 702 aa13.3□□□□□ -0.28
SSB-203ENST00000413002 RAD51Q06609 339 aa13.3□□□□□ -0.28
SSB-203ENST00000413002 CCDC15Q0P6D6 951 aa13.3□□□□□ -0.28
SSB-203ENST00000413002 SLC10A2Q12908 348 aaPredicted RBP13.3□□□□□ -0.28
SSB-203ENST00000413002 FGL2Q14314 439 aa13.3□□□□□ -0.28
SSB-203ENST00000413002 NAPEPLDQ6IQ20 393 aa13.3□□□□□ -0.28
SSB-203ENST00000413002 PSAPL1Q6NUJ1 521 aa13.3□□□□□ -0.28
SSB-203ENST00000413002 KDM7AQ6ZMT4 941 aa13.3□□□□□ -0.28
SSB-203ENST00000413002 HORMAD1Q86X24 394 aa13.3□□□□□ -0.28
SSB-203ENST00000413002 ZSWIM9Q86XI8 627 aa13.3□□□□□ -0.28
SSB-203ENST00000413002 TMTC1Q8IUR5 882 aa13.3□□□□□ -0.28
SSB-203ENST00000413002 MAP7D3Q8IWC1 876 aa13.3□□□□□ -0.28
SSB-203ENST00000413002 PGBD5Q8N414 524 aa13.3□□□□□ -0.28
SSB-203ENST00000413002 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.3□□□□□ -0.28
SSB-203ENST00000413002 LRIG1Q96JA1 1093 aa13.3□□□□□ -0.28
SSB-203ENST00000413002 CAMK1GQ96NX5 476 aa13.3□□□□□ -0.28
SSB-203ENST00000413002 ZNF670Q9BS34 389 aa13.3□□□□□ -0.28
SSB-203ENST00000413002 CAAP1Q9H8G2 361 aa13.3□□□□□ -0.28
SSB-203ENST00000413002 RCOR3Q9P2K3 495 aaPredicted RBP13.3□□□□□ -0.28
SSB-203ENST00000413002 LCMT1Q9UIC8 334 aa13.3□□□□□ -0.28
SSB-203ENST00000413002 KNL1Q8NG31 2342 aa13.3□□□□□ -0.28
SSB-203ENST00000413002 NCOR2Q9Y618 2525 aa13.29□□□□□ -0.28
SSB-203ENST00000413002 A0A0U1RQJ8 604 aa13.29□□□□□ -0.28
SSB-203ENST00000413002 IGLON5A6NGN9 336 aa13.29□□□□□ -0.28
SSB-203ENST00000413002 C3orf70A6NLC5 250 aaPredicted RBP13.29□□□□□ -0.28
SSB-203ENST00000413002 VILLO15195 856 aa13.29□□□□□ -0.28
SSB-203ENST00000413002 SH3BP5O60239 455 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms