RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 CREB3O43889 395 aa14.96□□□□□ -0.01
CBX3-203ENST00000409747 ABL2P42684 1182 aa14.96□□□□□ -0.01
CBX3-203ENST00000409747 PPP1R15BQ5SWA1 713 aa14.96□□□□□ -0.01
CBX3-203ENST00000409747 ACAD10Q6JQN1 1059 aa14.96□□□□□ -0.01
CBX3-203ENST00000409747 C19orf48Q6RUI8 117 aa14.96□□□□□ -0.01
CBX3-203ENST00000409747 GDPD4Q6W3E5 623 aa14.96□□□□□ -0.01
CBX3-203ENST00000409747 APTXQ7Z2E3 356 aaKnown RBP14.96□□□□□ -0.01
CBX3-203ENST00000409747 MCOLN2Q8IZK6 566 aa14.96□□□□□ -0.01
CBX3-203ENST00000409747 AOPEPQ8N6M6 819 aa14.96□□□□□ -0.01
CBX3-203ENST00000409747 VCPIP1Q96JH7 1222 aa14.96□□□□□ -0.01
CBX3-203ENST00000409747 KLHL32Q96NJ5 620 aa14.96□□□□□ -0.01
CBX3-203ENST00000409747 TTYH3Q9C0H2 523 aa14.96□□□□□ -0.01
CBX3-203ENST00000409747 UCKL1Q9NWZ5 548 aa14.96□□□□□ -0.01
CBX3-203ENST00000409747 IPO11Q9UI26 975 aaKnown RBP14.96□□□□□ -0.01
CBX3-203ENST00000409747 CLCA2Q9UQC9 943 aa14.96□□□□□ -0.01
CBX3-203ENST00000409747 APC2O95996 2303 aa14.96□□□□□ -0.02
CBX3-203ENST00000409747 CELSR3Q9NYQ7 3312 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 A0A087WV48 116 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 SPTY2D1-AS1A0A0U1RR47 76 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 POM121BA6NF01 834 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 IGLON5A6NGN9 336 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 EIF3CLB5ME19 914 aaKnown RBP14.95□□□□□ -0.02
CBX3-203ENST00000409747 CKMT1AP12532 417 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 NME1P15531 152 aaKnown RBP14.95□□□□□ -0.02
CBX3-203ENST00000409747 GKP32189 559 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 DUSP3P51452 185 aaPredicted RBP14.95□□□□□ -0.02
CBX3-203ENST00000409747 RHOAP61586 193 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 RPL7AP62424 266 aaKnown RBP14.95□□□□□ -0.02
CBX3-203ENST00000409747 TYRO3Q06418 890 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 FGL2Q14314 439 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 COL28A1Q2UY09 1125 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 LEKR1Q6ZMV7 388 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 PYROXD2Q8N2H3 581 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 EIF3CQ99613 913 aaKnown RBP14.95□□□□□ -0.02
CBX3-203ENST00000409747 MAGEB5Q9BZ81 275 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 HSD3B7Q9H2F3 369 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 NCKIPSDQ9NZQ3 722 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 MFHAS1Q9Y4C4 1052 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 AK5Q9Y6K8 562 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 ARID1BQ8NFD5 2236 aaPredicted RBP14.95□□□□□ -0.02
CBX3-203ENST00000409747 RASA4BC9J798 803 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 SCAMP1O15126 338 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 RAD51BO15315 384 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 RASA4O43374 803 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 CSF2P04141 144 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 GP1BAP07359 652 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 TNFAIP3P21580 790 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 SUOXP51687 545 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 CLDN6P56747 220 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 TPI1P60174 286 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 INSM1Q01101 510 aaPredicted RBP14.95□□□□□ -0.02
CBX3-203ENST00000409747 SERINC3Q13530 473 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 PDE1CQ14123 709 aaPredicted RBP14.95□□□□□ -0.02
CBX3-203ENST00000409747 PTK2BQ14289 1009 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 FZD2Q14332 565 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 GRM3Q14832 879 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 RTP5Q14D33 572 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 ATXN7L2Q5T6C5 722 aaPredicted RBP14.95□□□□□ -0.02
CBX3-203ENST00000409747 TMC6Q7Z403 805 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 TTC7BQ86TV6 843 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 PDZD3Q86UT5 571 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 UMODL1-AS1Q8N2C9 162 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 FAM181AQ8N9Y4 354 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 HNRNPLLQ8WVV9 542 aaKnown RBP14.95□□□□□ -0.02
CBX3-203ENST00000409747 HMCESQ96FZ2 354 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 KLF6Q99612 283 aaPredicted RBP14.95□□□□□ -0.02
CBX3-203ENST00000409747 NCAPGQ9BPX3 1015 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 BPIFA3Q9BQP9 254 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 NOL6Q9H6R4 1146 aaKnown RBP14.95□□□□□ -0.02
CBX3-203ENST00000409747 PARVAQ9NVD7 372 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 DKK3Q9UBP4 350 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 CSNK1G3Q9Y6M4 447 aa14.95□□□□□ -0.02
CBX3-203ENST00000409747 TOR1BO14657 336 aa14.94□□□□□ -0.02
CBX3-203ENST00000409747 AREL1O15033 823 aa14.94□□□□□ -0.02
CBX3-203ENST00000409747 ATP1A3P13637 1013 aa14.94□□□□□ -0.02
CBX3-203ENST00000409747 FILIP1LQ4L180 1135 aa14.94□□□□□ -0.02
CBX3-203ENST00000409747 DCBLD1Q8N8Z6 715 aa14.94□□□□□ -0.02
CBX3-203ENST00000409747 ZNF548Q8NEK5 533 aaPredicted RBP14.94□□□□□ -0.02
CBX3-203ENST00000409747 CXorf40AQ8TE69 158 aa14.94□□□□□ -0.02
CBX3-203ENST00000409747 BTN2A2Q8WVV5 523 aa14.94□□□□□ -0.02
CBX3-203ENST00000409747 ITM2BQ9Y287 266 aa14.94□□□□□ -0.02
CBX3-203ENST00000409747 SMTNL1A8MU46 457 aa14.93□□□□□ -0.02
CBX3-203ENST00000409747 XPAP23025 273 aaPredicted RBP14.93□□□□□ -0.02
CBX3-203ENST00000409747 THOP1P52888 689 aa14.93□□□□□ -0.02
CBX3-203ENST00000409747 PFN3P60673 137 aa14.93□□□□□ -0.02
CBX3-203ENST00000409747 ELP6Q0PNE2 266 aa14.93□□□□□ -0.02
CBX3-203ENST00000409747 ZNF542PQ5EBM4 170 aa14.93□□□□□ -0.02
CBX3-203ENST00000409747 ZCCHC8Q6NZY4 707 aaKnown RBP14.93□□□□□ -0.02
CBX3-203ENST00000409747 IRF2BP2Q7Z5L9 587 aa14.93□□□□□ -0.02
CBX3-203ENST00000409747 DNAAF5Q86Y56 855 aa14.93□□□□□ -0.02
CBX3-203ENST00000409747 HCAR2Q8TDS4 363 aa14.93□□□□□ -0.02
CBX3-203ENST00000409747 APOLD1Q96LR9 279 aa14.93□□□□□ -0.02
CBX3-203ENST00000409747 CPEB1Q9BZB8 566 aaKnown RBP14.93□□□□□ -0.02
CBX3-203ENST00000409747 UBA2Q9UBT2 640 aaPredicted RBP14.93□□□□□ -0.02
CBX3-203ENST00000409747 GGT7Q9UJ14 662 aa14.93□□□□□ -0.02
CBX3-203ENST00000409747 CACNA1GO43497 2377 aa14.93□□□□□ -0.02
CBX3-203ENST00000409747 K7ESM1 405 aa14.92□□□□□ -0.02
CBX3-203ENST00000409747 SPINT1O43278 529 aa14.92□□□□□ -0.02
CBX3-203ENST00000409747 TM7SF2O76062 418 aa14.92□□□□□ -0.02
CBX3-203ENST00000409747 GIMD1P0DJR0 217 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms