RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 A0A1B0GVG6 124 aa13.54□□□□□ -0.24
COL6A2-204ENST00000409416 FESP07332 822 aa13.54□□□□□ -0.24
COL6A2-204ENST00000409416 RGS2P41220 211 aa13.54□□□□□ -0.24
COL6A2-204ENST00000409416 RAB27AP51159 221 aa13.54□□□□□ -0.24
COL6A2-204ENST00000409416 SLC5A3P53794 718 aa13.54□□□□□ -0.24
COL6A2-204ENST00000409416 ZNF235Q14590 738 aa13.54□□□□□ -0.24
COL6A2-204ENST00000409416 PIM3Q86V86 326 aa13.54□□□□□ -0.24
COL6A2-204ENST00000409416 CACUL1Q86Y37 369 aa13.54□□□□□ -0.24
COL6A2-204ENST00000409416 CDH19Q9H159 772 aa13.54□□□□□ -0.24
COL6A2-204ENST00000409416 IPO11Q9UI26 975 aaKnown RBP13.54□□□□□ -0.24
COL6A2-204ENST00000409416 DOCK1Q14185 1865 aa13.54□□□□□ -0.24
COL6A2-204ENST00000409416 LTBP3Q9NS15 1303 aa13.54□□□□□ -0.24
COL6A2-204ENST00000409416 I6L893 689 aaPredicted RBP13.54□□□□□ -0.24
COL6A2-204ENST00000409416 XPO1O14980 1071 aaKnown RBP13.54□□□□□ -0.24
COL6A2-204ENST00000409416 GSRP00390 522 aa13.54□□□□□ -0.24
COL6A2-204ENST00000409416 MAGEA3P43357 314 aa13.54□□□□□ -0.24
COL6A2-204ENST00000409416 GRIA4P48058 902 aa13.54□□□□□ -0.24
COL6A2-204ENST00000409416 DAOAP59103 153 aa13.54□□□□□ -0.24
COL6A2-204ENST00000409416 IL1RL1Q01638 556 aa13.54□□□□□ -0.24
COL6A2-204ENST00000409416 RALGDSQ12967 914 aa13.54□□□□□ -0.24
COL6A2-204ENST00000409416 DUSP4Q13115 394 aa13.54□□□□□ -0.24
COL6A2-204ENST00000409416 ZNF789Q5FWF6 425 aa13.54□□□□□ -0.24
COL6A2-204ENST00000409416 MFSD14CQ5VZR4 134 aa13.54□□□□□ -0.24
COL6A2-204ENST00000409416 MAMDC4Q6UXC1 1216 aa13.54□□□□□ -0.24
COL6A2-204ENST00000409416 PSTKQ8IV42 348 aaKnown RBP13.54□□□□□ -0.24
COL6A2-204ENST00000409416 AUTS2Q8WXX7 1259 aa13.54□□□□□ -0.24
COL6A2-204ENST00000409416 APBB2Q92870 758 aa13.54□□□□□ -0.24
COL6A2-204ENST00000409416 SCLYQ96I15 445 aa13.54□□□□□ -0.24
COL6A2-204ENST00000409416 RPL10LQ96L21 214 aaKnown RBP13.54□□□□□ -0.24
COL6A2-204ENST00000409416 BTRCQ9Y297 605 aa13.54□□□□□ -0.24
COL6A2-204ENST00000409416 MGAMO43451 1857 aa13.54□□□□□ -0.24
COL6A2-204ENST00000409416 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.53□□□□□ -0.24
COL6A2-204ENST00000409416 GPR39O43194 453 aa13.53□□□□□ -0.24
COL6A2-204ENST00000409416 ODC1P11926 461 aa13.53□□□□□ -0.24
COL6A2-204ENST00000409416 KYAT1Q16773 422 aa13.53□□□□□ -0.24
COL6A2-204ENST00000409416 PKDCCQ504Y2 493 aa13.53□□□□□ -0.24
COL6A2-204ENST00000409416 GRTP1Q5TC63 336 aa13.53□□□□□ -0.24
COL6A2-204ENST00000409416 SEL1L3Q68CR1 1132 aa13.53□□□□□ -0.24
COL6A2-204ENST00000409416 CNSTQ6PJW8 725 aa13.53□□□□□ -0.24
COL6A2-204ENST00000409416 ACAD11Q709F0 780 aa13.53□□□□□ -0.24
COL6A2-204ENST00000409416 ZDHHC17Q8IUH5 632 aa13.53□□□□□ -0.24
COL6A2-204ENST00000409416 FBXW8Q8N3Y1 598 aa13.53□□□□□ -0.24
COL6A2-204ENST00000409416 OR10T2Q8NGX3 314 aa13.53□□□□□ -0.24
COL6A2-204ENST00000409416 ACMSDQ8TDX5 336 aa13.53□□□□□ -0.24
COL6A2-204ENST00000409416 ACE2Q9BYF1 805 aaPredicted RBP13.53□□□□□ -0.24
COL6A2-204ENST00000409416 GMIPQ9P107 970 aa13.53□□□□□ -0.24
COL6A2-204ENST00000409416 MGEA5O60502 916 aa13.53□□□□□ -0.24
COL6A2-204ENST00000409416 AOC2O75106 756 aa13.53□□□□□ -0.24
COL6A2-204ENST00000409416 OR6B1O95007 311 aa13.53□□□□□ -0.24
COL6A2-204ENST00000409416 VCLP18206 1134 aa13.53□□□□□ -0.24
COL6A2-204ENST00000409416 PIK3CGP48736 1102 aa13.53□□□□□ -0.24
COL6A2-204ENST00000409416 TUBB3Q13509 450 aa13.53□□□□□ -0.24
COL6A2-204ENST00000409416 NRF1Q16656 503 aa13.53□□□□□ -0.24
COL6A2-204ENST00000409416 FAM110CQ1W6H9 321 aa13.53□□□□□ -0.24
COL6A2-204ENST00000409416 RBM20Q5T481 1227 aaKnown RBP13.53□□□□□ -0.24
COL6A2-204ENST00000409416 CWF19L1Q69YN2 538 aaKnown RBP13.53□□□□□ -0.24
COL6A2-204ENST00000409416 PRSS55Q6UWB4 352 aaPredicted RBP13.53□□□□□ -0.24
COL6A2-204ENST00000409416 AGMOQ6ZNB7 445 aa13.53□□□□□ -0.24
COL6A2-204ENST00000409416 TMC7Q7Z402 723 aa13.53□□□□□ -0.24
COL6A2-204ENST00000409416 SATL1Q86VE3 508 aa13.53□□□□□ -0.24
COL6A2-204ENST00000409416 RAET1EQ8TD07 263 aa13.53□□□□□ -0.24
COL6A2-204ENST00000409416 SMARCD1Q96GM5 515 aa13.53□□□□□ -0.24
COL6A2-204ENST00000409416 RBBP8Q99708 897 aa13.53□□□□□ -0.24
COL6A2-204ENST00000409416 SLC39A8Q9C0K1 460 aa13.53□□□□□ -0.24
COL6A2-204ENST00000409416 CCDC68Q9H2F9 335 aa13.53□□□□□ -0.24
COL6A2-204ENST00000409416 GPAMQ9HCL2 828 aa13.53□□□□□ -0.24
COL6A2-204ENST00000409416 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.53□□□□□ -0.24
COL6A2-204ENST00000409416 PTGDR2Q9Y5Y4 395 aa13.53□□□□□ -0.24
COL6A2-204ENST00000409416 A0A1W2PQ67 120 aa13.52□□□□□ -0.24
COL6A2-204ENST00000409416 LRRC14BA6NHZ5 514 aa13.52□□□□□ -0.24
COL6A2-204ENST00000409416 CCDC166P0CW27 439 aa13.52□□□□□ -0.24
COL6A2-204ENST00000409416 AKR1A1P14550 325 aa13.52□□□□□ -0.24
COL6A2-204ENST00000409416 PIK3R1P27986 724 aa13.52□□□□□ -0.24
COL6A2-204ENST00000409416 OR1E1P30953 314 aa13.52□□□□□ -0.24
COL6A2-204ENST00000409416 PNPLA4P41247 253 aa13.52□□□□□ -0.24
COL6A2-204ENST00000409416 ROR2Q01974 943 aaKnown RBP13.52□□□□□ -0.24
COL6A2-204ENST00000409416 PDK3Q15120 406 aa13.52□□□□□ -0.24
COL6A2-204ENST00000409416 ARL13AQ5H913 290 aaPredicted RBP13.52□□□□□ -0.24
COL6A2-204ENST00000409416 PAQR9Q6ZVX9 377 aa13.52□□□□□ -0.24
COL6A2-204ENST00000409416 RAB3IL1Q8TBN0 382 aa13.52□□□□□ -0.24
COL6A2-204ENST00000409416 NMUR1Q9HB89 426 aa13.52□□□□□ -0.24
COL6A2-204ENST00000409416 HACD3Q9P035 362 aa13.52□□□□□ -0.24
COL6A2-204ENST00000409416 HACD1B0YJ81 288 aa13.52□□□□□ -0.25
COL6A2-204ENST00000409416 TPD52L2O43399 206 aaKnown RBP13.52□□□□□ -0.25
COL6A2-204ENST00000409416 IL1BP01584 269 aa13.52□□□□□ -0.25
COL6A2-204ENST00000409416 MAPK10P53779 464 aa13.52□□□□□ -0.25
COL6A2-204ENST00000409416 FOLH1Q04609 750 aa13.52□□□□□ -0.25
COL6A2-204ENST00000409416 SPANXN3Q5MJ09 141 aa13.52□□□□□ -0.25
COL6A2-204ENST00000409416 RNF111Q6ZNA4 994 aa13.52□□□□□ -0.25
COL6A2-204ENST00000409416 LRRC52Q8N7C0 313 aa13.52□□□□□ -0.25
COL6A2-204ENST00000409416 BHLHE22Q8NFJ8 381 aaPredicted RBP13.52□□□□□ -0.25
COL6A2-204ENST00000409416 HDAC10Q969S8 669 aa13.52□□□□□ -0.25
COL6A2-204ENST00000409416 PSMG2Q969U7 264 aa13.52□□□□□ -0.25
COL6A2-204ENST00000409416 PFDN4Q9NQP4 134 aa13.52□□□□□ -0.25
COL6A2-204ENST00000409416 GKN1Q9NS71 199 aa13.52□□□□□ -0.25
COL6A2-204ENST00000409416 RHBDL2Q9NX52 303 aa13.52□□□□□ -0.25
COL6A2-204ENST00000409416 CDH23Q9H251 3354 aa13.52□□□□□ -0.25
COL6A2-204ENST00000409416 F5P12259 2224 aa13.52□□□□□ -0.25
COL6A2-204ENST00000409416 FAM95CA0A1B0GW59 222 aa13.52□□□□□ -0.25
COL6A2-204ENST00000409416 KATNA1O75449 491 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms