RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 SPINT1O43278 529 aa19.57■□□□□ 0.72
SMARCB1-204ENST00000407422 FANCCQ00597 558 aa19.57■□□□□ 0.72
SMARCB1-204ENST00000407422 PARP15Q460N3 678 aa19.57■□□□□ 0.72
SMARCB1-204ENST00000407422 LRRC73Q5JTD7 316 aa19.57■□□□□ 0.72
SMARCB1-204ENST00000407422 ABI3BPQ7Z7G0 1075 aa19.57■□□□□ 0.72
SMARCB1-204ENST00000407422 CELF6Q96J87 481 aaKnown RBP19.57■□□□□ 0.72
SMARCB1-204ENST00000407422 BMFQ96LC9 184 aa19.57■□□□□ 0.72
SMARCB1-204ENST00000407422 GDAP1L1Q96MZ0 367 aa19.57■□□□□ 0.72
SMARCB1-204ENST00000407422 SNRNP25Q9BV90 132 aaKnown RBP19.57■□□□□ 0.72
SMARCB1-204ENST00000407422 EDEM3Q9BZQ6 932 aa19.57■□□□□ 0.72
SMARCB1-204ENST00000407422 ZFYVE26Q68DK2 2539 aa19.56■□□□□ 0.72
SMARCB1-204ENST00000407422 POM121BA6NF01 834 aa19.56■□□□□ 0.72
SMARCB1-204ENST00000407422 IGLON5A6NGN9 336 aa19.56■□□□□ 0.72
SMARCB1-204ENST00000407422 TAF4O00268 1085 aa19.56■□□□□ 0.72
SMARCB1-204ENST00000407422 MIPP30301 263 aa19.56■□□□□ 0.72
SMARCB1-204ENST00000407422 RHOAP61586 193 aa19.56■□□□□ 0.72
SMARCB1-204ENST00000407422 SMAD1Q15797 465 aaKnown RBP19.56■□□□□ 0.72
SMARCB1-204ENST00000407422 INO80DQ53TQ3 878 aaPredicted RBP19.56■□□□□ 0.72
SMARCB1-204ENST00000407422 ERMARDQ5T6L9 678 aa19.56■□□□□ 0.72
SMARCB1-204ENST00000407422 GDPD4Q6W3E5 623 aa19.56■□□□□ 0.72
SMARCB1-204ENST00000407422 Q6ZSR6 202 aa19.56■□□□□ 0.72
SMARCB1-204ENST00000407422 CYP4V2Q6ZWL3 525 aaPredicted RBP19.56■□□□□ 0.72
SMARCB1-204ENST00000407422 SLC25A45Q8N413 288 aa19.56■□□□□ 0.72
SMARCB1-204ENST00000407422 ZNF653Q96CK0 615 aa19.56■□□□□ 0.72
SMARCB1-204ENST00000407422 EXOC2Q96KP1 924 aa19.56■□□□□ 0.72
SMARCB1-204ENST00000407422 KCTD15Q96SI1 283 aaPredicted RBP19.56■□□□□ 0.72
SMARCB1-204ENST00000407422 LRRC19Q9H756 370 aa19.56■□□□□ 0.72
SMARCB1-204ENST00000407422 KLHL11Q9NVR0 708 aa19.56■□□□□ 0.72
SMARCB1-204ENST00000407422 J3KR12 359 aa19.55■□□□□ 0.72
SMARCB1-204ENST00000407422 EEF2KO00418 725 aaKnown RBP19.55■□□□□ 0.72
SMARCB1-204ENST00000407422 NEMP1O14524 444 aa19.55■□□□□ 0.72
SMARCB1-204ENST00000407422 INSIG1O15503 277 aa19.55■□□□□ 0.72
SMARCB1-204ENST00000407422 TSPAN6O43657 245 aa19.55■□□□□ 0.72
SMARCB1-204ENST00000407422 PBX1P40424 430 aa19.55■□□□□ 0.72
SMARCB1-204ENST00000407422 CLDN6P56747 220 aa19.55■□□□□ 0.72
SMARCB1-204ENST00000407422 CYTH1Q15438 398 aa19.55■□□□□ 0.72
SMARCB1-204ENST00000407422 FIGNQ5HY92 759 aa19.55■□□□□ 0.72
SMARCB1-204ENST00000407422 HGSNATQ68CP4 663 aa19.55■□□□□ 0.72
SMARCB1-204ENST00000407422 KDM7AQ6ZMT4 941 aa19.55■□□□□ 0.72
SMARCB1-204ENST00000407422 PTAR1Q7Z6K3 402 aaPredicted RBP19.55■□□□□ 0.72
SMARCB1-204ENST00000407422 CASKIN2Q8WXE0 1202 aa19.55■□□□□ 0.72
SMARCB1-204ENST00000407422 TSC1Q92574 1164 aa19.55■□□□□ 0.72
SMARCB1-204ENST00000407422 RAB7BQ96AH8 199 aa19.55■□□□□ 0.72
SMARCB1-204ENST00000407422 KLF6Q99612 283 aaPredicted RBP19.55■□□□□ 0.72
SMARCB1-204ENST00000407422 C1QTNF2Q9BXJ5 285 aa19.55■□□□□ 0.72
SMARCB1-204ENST00000407422 OSBPL1AQ9BXW6 950 aa19.55■□□□□ 0.72
SMARCB1-204ENST00000407422 UCKL1Q9NWZ5 548 aa19.55■□□□□ 0.72
SMARCB1-204ENST00000407422 MYO1AQ9UBC5 1043 aa19.55■□□□□ 0.72
SMARCB1-204ENST00000407422 LHX3Q9UBR4 397 aa19.55■□□□□ 0.72
SMARCB1-204ENST00000407422 HS3ST3A1Q9Y663 406 aa19.55■□□□□ 0.72
SMARCB1-204ENST00000407422 LRRK1Q38SD2 2015 aa19.55■□□□□ 0.72
SMARCB1-204ENST00000407422 ITPR1Q14643 2758 aa19.55■□□□□ 0.72
SMARCB1-204ENST00000407422 A6NNZ2 444 aa19.54■□□□□ 0.72
SMARCB1-204ENST00000407422 TRIM38O00635 465 aa19.54■□□□□ 0.72
SMARCB1-204ENST00000407422 IGSF6O95976 241 aa19.54■□□□□ 0.72
SMARCB1-204ENST00000407422 ITIH2P19823 946 aa19.54■□□□□ 0.72
SMARCB1-204ENST00000407422 HTR7P34969 479 aa19.54■□□□□ 0.72
SMARCB1-204ENST00000407422 ACADVLP49748 655 aa19.54■□□□□ 0.72
SMARCB1-204ENST00000407422 ZNF542PQ5EBM4 170 aa19.54■□□□□ 0.72
SMARCB1-204ENST00000407422 TTC7BQ86TV6 843 aa19.54■□□□□ 0.72
SMARCB1-204ENST00000407422 GALNT15Q8N3T1 639 aa19.54■□□□□ 0.72
SMARCB1-204ENST00000407422 FNIP1Q8TF40 1166 aa19.54■□□□□ 0.72
SMARCB1-204ENST00000407422 SLC39A8Q9C0K1 460 aa19.54■□□□□ 0.72
SMARCB1-204ENST00000407422 ISCUQ9H1K1 167 aa19.54■□□□□ 0.72
SMARCB1-204ENST00000407422 PDFQ9HBH1 243 aa19.54■□□□□ 0.72
SMARCB1-204ENST00000407422 ANKRD36A6QL64 1941 aa19.54■□□□□ 0.72
SMARCB1-204ENST00000407422 MYLKQ15746 1914 aa19.54■□□□□ 0.72
SMARCB1-204ENST00000407422 AREL1O15033 823 aa19.54■□□□□ 0.72
SMARCB1-204ENST00000407422 LRCH4O75427 683 aa19.54■□□□□ 0.72
SMARCB1-204ENST00000407422 RNF8O76064 485 aa19.54■□□□□ 0.72
SMARCB1-204ENST00000407422 DGKAP23743 735 aa19.54■□□□□ 0.72
SMARCB1-204ENST00000407422 UBASH3AP57075 661 aa19.54■□□□□ 0.72
SMARCB1-204ENST00000407422 SGCGQ13326 291 aa19.54■□□□□ 0.72
SMARCB1-204ENST00000407422 PPP6R3Q5H9R7 873 aaPredicted RBP19.54■□□□□ 0.72
SMARCB1-204ENST00000407422 RFX8Q6ZV50 586 aa19.54■□□□□ 0.72
SMARCB1-204ENST00000407422 MDM1Q8TC05 714 aa19.54■□□□□ 0.72
SMARCB1-204ENST00000407422 GPR27Q9NS67 375 aa19.54■□□□□ 0.72
SMARCB1-204ENST00000407422 UBA2Q9UBT2 640 aaPredicted RBP19.54■□□□□ 0.72
SMARCB1-204ENST00000407422 RALYQ9UKM9 306 aaKnown RBP19.54■□□□□ 0.72
SMARCB1-204ENST00000407422 MFHAS1Q9Y4C4 1052 aa19.54■□□□□ 0.72
SMARCB1-204ENST00000407422 PCDHGA1Q9Y5H4 931 aa19.54■□□□□ 0.72
SMARCB1-204ENST00000407422 FAM208BQ5VWN6 2430 aa19.53■□□□□ 0.72
SMARCB1-204ENST00000407422 PRPSAP2O60256 369 aa19.53■□□□□ 0.72
SMARCB1-204ENST00000407422 RFPL3O75679 317 aa19.53■□□□□ 0.72
SMARCB1-204ENST00000407422 PAPOLAP51003 745 aaKnown RBP19.53■□□□□ 0.72
SMARCB1-204ENST00000407422 NDST2P52849 883 aa19.53■□□□□ 0.72
SMARCB1-204ENST00000407422 RAD51Q06609 339 aa19.53■□□□□ 0.72
SMARCB1-204ENST00000407422 KYAT3Q6YP21 454 aaKnown RBP19.53■□□□□ 0.72
SMARCB1-204ENST00000407422 PROSER1Q86XN7 944 aa19.53■□□□□ 0.72
SMARCB1-204ENST00000407422 CPLX3Q8WVH0 158 aa19.53■□□□□ 0.72
SMARCB1-204ENST00000407422 SCINQ9Y6U3 715 aa19.53■□□□□ 0.72
SMARCB1-204ENST00000407422 A0A1W2PQJ5 194 aa19.52■□□□□ 0.72
SMARCB1-204ENST00000407422 EIF3CLB5ME19 914 aaKnown RBP19.52■□□□□ 0.72
SMARCB1-204ENST00000407422 DAPK3O43293 454 aa19.52■□□□□ 0.72
SMARCB1-204ENST00000407422 SIGLEC6O43699 453 aa19.52■□□□□ 0.72
SMARCB1-204ENST00000407422 PRAMEF11O60813 436 aa19.52■□□□□ 0.72
SMARCB1-204ENST00000407422 PIAS2O75928 621 aa19.52■□□□□ 0.72
SMARCB1-204ENST00000407422 PIGNO95427 931 aa19.52■□□□□ 0.72
SMARCB1-204ENST00000407422 TCF4P15884 667 aa19.52■□□□□ 0.72
SMARCB1-204ENST00000407422 TIMP2P16035 220 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms