RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 TRIM48Q8IWZ4 208 aa13.48□□□□□ -0.25
SNED1-205ENST00000405547 DEPDC4Q8N2C3 294 aa13.48□□□□□ -0.25
SNED1-205ENST00000405547 ACO2Q99798 780 aaKnown RBP13.48□□□□□ -0.25
SNED1-205ENST00000405547 PTPRHQ9HD43 1115 aa13.48□□□□□ -0.25
SNED1-205ENST00000405547 ARL8BQ9NVJ2 186 aa13.48□□□□□ -0.25
SNED1-205ENST00000405547 SNCAIPQ9Y6H5 919 aa13.48□□□□□ -0.25
SNED1-205ENST00000405547 BBIP1A8MTZ0 92 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 WNT7AO00755 349 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 TSPAN19P0C672 248 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 YWHAQP27348 245 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 STARD3Q14849 445 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 FGD3Q5JSP0 725 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 C10orf53Q8N6V4 93 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 MAGEB10Q96LZ2 347 aaPredicted RBP13.47□□□□□ -0.25
SNED1-205ENST00000405547 NMUR2Q9GZQ4 415 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 KNDC1Q76NI1 1749 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 PIAS1O75925 651 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 KBTBD8Q8NFY9 601 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 GIPC3Q8TF64 312 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 C7orf26Q96N11 449 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 SSU72Q9NP77 194 aaKnown RBP13.47□□□□□ -0.25
SNED1-205ENST00000405547 NINQ8N4C6 2090 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 NOS3P29474 1203 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 JAM2P57087 298 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 SPIRE1Q08AE8 756 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 BLMHQ13867 455 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 ZNF846Q147U1 533 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 HASPINQ8TF76 798 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 C18orf25Q96B23 403 aaPredicted RBP13.47□□□□□ -0.25
SNED1-205ENST00000405547 MCRS1Q96EZ8 462 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 PRDM12Q9H4Q4 367 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 PLA2G4CQ9UP65 541 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 MGRN1O60291 552 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 PTPN1P18031 435 aaKnown RBP13.47□□□□□ -0.25
SNED1-205ENST00000405547 ARL4DP49703 201 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 TXNDC11Q6PKC3 985 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 DSELQ8IZU8 1212 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 RBM15BQ8NDT2 890 aaKnown RBP13.47□□□□□ -0.25
SNED1-205ENST00000405547 GINS4Q9BRT9 223 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 OSBPL7Q9BZF2 842 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 SEMA4BQ9NPR2 832 aaPredicted RBP13.47□□□□□ -0.25
SNED1-205ENST00000405547 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.47□□□□□ -0.25
SNED1-205ENST00000405547 DOLKQ9UPQ8 538 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 ALDH2P05091 517 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 ALDH9A1P49189 494 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 NBPF12Q5TAG4 269 aaPredicted RBP13.47□□□□□ -0.25
SNED1-205ENST00000405547 ADGRD1Q6QNK2 874 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 PIGWQ7Z7B1 504 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 NKD2Q969F2 451 aaPredicted RBP13.47□□□□□ -0.25
SNED1-205ENST00000405547 RHOJQ9H4E5 214 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 PARP4Q9UKK3 1724 aaKnown RBP13.47□□□□□ -0.25
SNED1-205ENST00000405547 BCLAF3A2AJT9 711 aaKnown RBP13.47□□□□□ -0.25
SNED1-205ENST00000405547 MATKP42679 507 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 ZNF157P51786 506 aaPredicted RBP13.47□□□□□ -0.25
SNED1-205ENST00000405547 EPHB3P54753 998 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 USP4Q13107 963 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 SENP6Q9GZR1 1112 aaPredicted RBP13.47□□□□□ -0.25
SNED1-205ENST00000405547 MUC13Q9H3R2 512 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 ARL15Q9NXU5 204 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 GMPPBQ9Y5P6 360 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 NID2Q14112 1375 aa13.47□□□□□ -0.25
SNED1-205ENST00000405547 DCDC2CA8MYV0 355 aa13.46□□□□□ -0.25
SNED1-205ENST00000405547 DARSP14868 501 aaKnown RBP13.46□□□□□ -0.25
SNED1-205ENST00000405547 ITGB6P18564 788 aa13.46□□□□□ -0.25
SNED1-205ENST00000405547 FEN1P39748 380 aaKnown RBP13.46□□□□□ -0.25
SNED1-205ENST00000405547 MAPK10P53779 464 aa13.46□□□□□ -0.25
SNED1-205ENST00000405547 HADHBP55084 474 aaKnown RBP13.46□□□□□ -0.25
SNED1-205ENST00000405547 ZIK1Q3SY52 487 aaPredicted RBP13.46□□□□□ -0.25
SNED1-205ENST00000405547 GPR107Q5VW38 600 aa13.46□□□□□ -0.25
SNED1-205ENST00000405547 ARHGAP36Q6ZRI8 547 aa13.46□□□□□ -0.25
SNED1-205ENST00000405547 SLC16A10Q8TF71 515 aa13.46□□□□□ -0.25
SNED1-205ENST00000405547 NDNQ99608 321 aa13.46□□□□□ -0.25
SNED1-205ENST00000405547 EPB41L1Q9H4G0 881 aa13.46□□□□□ -0.25
SNED1-205ENST00000405547 ATP13A1Q9HD20 1204 aa13.46□□□□□ -0.25
SNED1-205ENST00000405547 GOT1P17174 413 aa13.46□□□□□ -0.25
SNED1-205ENST00000405547 POLD2P49005 469 aa13.46□□□□□ -0.25
SNED1-205ENST00000405547 PPIL2Q13356 520 aa13.46□□□□□ -0.25
SNED1-205ENST00000405547 ISLR2Q6UXK2 745 aa13.46□□□□□ -0.25
SNED1-205ENST00000405547 CLYBLQ8N0X4 340 aa13.46□□□□□ -0.25
SNED1-205ENST00000405547 ULBP1Q9BZM6 244 aa13.46□□□□□ -0.25
SNED1-205ENST00000405547 ABHD16BQ9H3Z7 469 aa13.46□□□□□ -0.25
SNED1-205ENST00000405547 CLN6Q9NWW5 311 aa13.46□□□□□ -0.25
SNED1-205ENST00000405547 CHKBQ9Y259 395 aa13.46□□□□□ -0.25
SNED1-205ENST00000405547 NFAT5O94916 1531 aa13.46□□□□□ -0.25
SNED1-205ENST00000405547 HGFP14210 728 aa13.46□□□□□ -0.25
SNED1-205ENST00000405547 IDH2P48735 452 aaKnown RBP13.46□□□□□ -0.25
SNED1-205ENST00000405547 RHBDL3P58872 404 aa13.46□□□□□ -0.25
SNED1-205ENST00000405547 FSCN1Q16658 493 aaKnown RBP13.46□□□□□ -0.25
SNED1-205ENST00000405547 ITIH5Q86UX2 942 aa13.46□□□□□ -0.25
SNED1-205ENST00000405547 C12orf50Q8NA57 414 aaPredicted RBP13.46□□□□□ -0.25
SNED1-205ENST00000405547 DNAJB3Q8WWF6 145 aa13.46□□□□□ -0.25
SNED1-205ENST00000405547 SELENOMQ8WWX9 145 aa13.46□□□□□ -0.25
SNED1-205ENST00000405547 CD101Q93033 1021 aa13.46□□□□□ -0.25
SNED1-205ENST00000405547 TBC1D30Q9Y2I9 924 aa13.46□□□□□ -0.25
SNED1-205ENST00000405547 UBIAD1Q9Y5Z9 338 aa13.46□□□□□ -0.25
SNED1-205ENST00000405547 DPEP1P16444 411 aa13.46□□□□□ -0.25
SNED1-205ENST00000405547 TPSB2P20231 275 aa13.46□□□□□ -0.25
SNED1-205ENST00000405547 TPSAB1Q15661 275 aa13.46□□□□□ -0.25
SNED1-205ENST00000405547 ZNF180Q9UJW8 692 aa13.46□□□□□ -0.25
SNED1-205ENST00000405547 AIF1P55008 147 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms