RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 TXNDC8Q6A555 127 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 SLC18B1Q6NT16 456 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 DBX2Q6ZNG2 339 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 CLEC17AQ6ZS10 378 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 ENOSF1Q7L5Y1 443 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 YTHDF3Q7Z739 585 aaKnown RBP4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 ADGRG3Q86Y34 549 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 GALNT16Q8N428 558 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 SLC25A41Q8N5S1 370 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 DPP10Q8N608 796 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 FRMD1Q8N878 549 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 C11orf65Q8NCR3 313 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 NOC3LQ8WTT2 800 aaKnown RBP4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 RSRC1Q96IZ7 334 aaKnown RBP4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 SIGLEC11Q96RL6 698 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 YME1L1Q96TA2 773 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 FAM118BQ9BPY3 351 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 TREX2Q9BQ50 279 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 MUC13Q9H3R2 512 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 PAPOLBQ9NRJ5 636 aaKnown RBP4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 THSD1Q9NS62 852 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 SLC6A13Q9NSD5 602 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 A4GNTQ9UNA3 340 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 COG5Q9UP83 839 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 RSF1Q96T23 1441 aaPredicted RBP4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 RUSC2Q8N2Y8 1516 aa4.1□□□□□ -1.75
HMGB1P17-201ENST00000403495 A0A0G2JK05 382 aa4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 KIR2DS5A0A0G2JLQ3 304 aa4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 A0A1W2PQF6 199 aa4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 TYW5A2RUC4 315 aaKnown RBP4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 EIF3CLB5ME19 914 aaKnown RBP4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 F8W810 466 aa4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 KIR2DS3K7RE56 304 aa4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 GTPBP1O00178 669 aaKnown RBP4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 BCAT2O15382 392 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 BCAR3O75815 825 aa4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 CTSAP10619 480 aa4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 UNGP13051 313 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 CTPS1P17812 591 aa4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 YWHAQP27348 245 aa4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 TM4SF1P30408 202 aa4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 RFC1P35251 1148 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 SLC16A2P36021 539 aa4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 GARSP41250 739 aaKnown RBP4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 CXCR3P49682 368 aa4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 BLKP51451 505 aa4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 ELLP55199 621 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 NAP1L1P55209 391 aaKnown RBP4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 HDAC4P56524 1084 aa4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 NLRP5P59047 1200 aa4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 YWHAZP63104 245 aaKnown RBP4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 CREB5Q02930 508 aa4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 SLC10A2Q12908 348 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 FGFBP1Q14512 234 aa4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 Q4G0T1 1027 aa4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 TTC39AQ5SRH9 613 aa4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 C6orf10Q5SRN2 563 aa4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 ATG9BQ674R7 924 aa4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 NUGGCQ68CJ6 796 aa4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 TMEM71Q6P5X7 295 aa4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 FBXO46Q6PJ61 603 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 TSSK4Q6SA08 328 aa4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 SZRD1Q7Z422 152 aa4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 KDELC2Q7Z4H8 507 aa4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 SERPINA11Q86U17 422 aa4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 TBC1D26Q86UD7 250 aa4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 IGFN1Q86VF2 1251 aa4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 FAM217AQ8IXS0 508 aa4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 C17orf53Q8N3J3 647 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 PSPC1Q8WXF1 523 aaKnown RBP4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 SMARCE1Q969G3 411 aa4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 ZKSCAN4Q969J2 545 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 ZC3HAV1LQ96H79 300 aaKnown RBP4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 MXD3Q9BW11 206 aa4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 POLDIP3Q9BY77 421 aaKnown RBP4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 PRKRIP1Q9H875 184 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 KIF9Q9HAQ2 790 aa4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 PNRC2Q9NPJ4 139 aaKnown RBP4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 PLK2Q9NYY3 685 aa4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 CLIC5Q9NZA1 410 aa4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 MSRB1Q9NZV6 116 aa4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 FBXO40Q9UH90 709 aa4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 SLCO3A1Q9UIG8 710 aa4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 RPS6KL1Q9Y6S9 549 aa4.09□□□□□ -1.75
HMGB1P17-201ENST00000403495 KAT6BQ8WYB5 2073 aa4.09□□□□□ -1.76
HMGB1P17-201ENST00000403495 LIPT2A6NK58 231 aa4.08□□□□□ -1.76
HMGB1P17-201ENST00000403495 LRRC53A6NM62 1247 aa4.08□□□□□ -1.76
HMGB1P17-201ENST00000403495 AGAP14A8MT82 685 aa4.08□□□□□ -1.76
HMGB1P17-201ENST00000403495 KLRF2D3W0D1 207 aa4.08□□□□□ -1.76
HMGB1P17-201ENST00000403495 HSPB6O14558 160 aa4.08□□□□□ -1.76
HMGB1P17-201ENST00000403495 VILLO15195 856 aa4.08□□□□□ -1.76
HMGB1P17-201ENST00000403495 RBMXL2O75526 392 aaKnown RBP4.08□□□□□ -1.76
HMGB1P17-201ENST00000403495 CCNDBP1O95273 360 aa4.08□□□□□ -1.76
HMGB1P17-201ENST00000403495 CLDN7O95471 211 aa4.08□□□□□ -1.76
HMGB1P17-201ENST00000403495 TOP3BO95985 862 aaKnown RBP4.08□□□□□ -1.76
HMGB1P17-201ENST00000403495 EIF2S1P05198 315 aaKnown RBP4.08□□□□□ -1.76
HMGB1P17-201ENST00000403495 KRT10P13645 584 aa4.08□□□□□ -1.76
HMGB1P17-201ENST00000403495 PORP16435 677 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P17-201ENST00000403495 PIP4K2AP48426 406 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P17-201ENST00000403495 PPP3CCP48454 512 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms