RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 NCBP2-AS2Q69YL0 99 aa14.28□□□□□ -0.12
HLA-DQB1-202ENST00000399079 GDPD4Q6W3E5 623 aa14.28□□□□□ -0.12
HLA-DQB1-202ENST00000399079 TMEM139Q8IV31 216 aa14.28□□□□□ -0.12
HLA-DQB1-202ENST00000399079 SERAC1Q96JX3 654 aa14.28□□□□□ -0.12
HLA-DQB1-202ENST00000399079 ZNF670Q9BS34 389 aa14.28□□□□□ -0.12
HLA-DQB1-202ENST00000399079 IL21RQ9HBE5 538 aa14.28□□□□□ -0.12
HLA-DQB1-202ENST00000399079 PREBQ9HCU5 417 aa14.28□□□□□ -0.12
HLA-DQB1-202ENST00000399079 GGT7Q9UJ14 662 aa14.28□□□□□ -0.12
HLA-DQB1-202ENST00000399079 SALL4Q9UJQ4 1053 aa14.28□□□□□ -0.12
HLA-DQB1-202ENST00000399079 REXO2Q9Y3B8 237 aaKnown RBP14.28□□□□□ -0.12
HLA-DQB1-202ENST00000399079 DUSP10Q9Y6W6 482 aa14.28□□□□□ -0.12
HLA-DQB1-202ENST00000399079 DOCK9Q9BZ29 2069 aa14.28□□□□□ -0.12
HLA-DQB1-202ENST00000399079 PLXNA2O75051 1894 aa14.28□□□□□ -0.12
HLA-DQB1-202ENST00000399079 A0A1W2PQU0 124 aa14.27□□□□□ -0.12
HLA-DQB1-202ENST00000399079 TTC24A2A3L6 582 aaPredicted RBP14.27□□□□□ -0.12
HLA-DQB1-202ENST00000399079 LRRD1A4D1F6 860 aa14.27□□□□□ -0.12
HLA-DQB1-202ENST00000399079 KCNK3O14649 394 aa14.27□□□□□ -0.12
HLA-DQB1-202ENST00000399079 PEX11BO96011 259 aa14.27□□□□□ -0.12
HLA-DQB1-202ENST00000399079 WNT1P04628 370 aa14.27□□□□□ -0.12
HLA-DQB1-202ENST00000399079 PRLRP16471 622 aa14.27□□□□□ -0.12
HLA-DQB1-202ENST00000399079 ABL2P42684 1182 aa14.27□□□□□ -0.12
HLA-DQB1-202ENST00000399079 GRIA4P48058 902 aa14.27□□□□□ -0.12
HLA-DQB1-202ENST00000399079 RAD51Q06609 339 aa14.27□□□□□ -0.12
HLA-DQB1-202ENST00000399079 KIF19Q2TAC6 998 aa14.27□□□□□ -0.12
HLA-DQB1-202ENST00000399079 SEL1L3Q68CR1 1132 aa14.27□□□□□ -0.12
HLA-DQB1-202ENST00000399079 ADAT2Q7Z6V5 191 aaKnown RBP14.27□□□□□ -0.12
HLA-DQB1-202ENST00000399079 TRIM69Q86WT6 500 aa14.27□□□□□ -0.12
HLA-DQB1-202ENST00000399079 MAP7D3Q8IWC1 876 aa14.27□□□□□ -0.12
HLA-DQB1-202ENST00000399079 ATPAF2Q8N5M1 289 aa14.27□□□□□ -0.12
HLA-DQB1-202ENST00000399079 PQLC3Q8N755 202 aa14.27□□□□□ -0.12
HLA-DQB1-202ENST00000399079 ACRBPQ8NEB7 543 aa14.27□□□□□ -0.12
HLA-DQB1-202ENST00000399079 LRRN4Q8WUT4 740 aa14.27□□□□□ -0.12
HLA-DQB1-202ENST00000399079 FAF2Q96CS3 445 aa14.27□□□□□ -0.12
HLA-DQB1-202ENST00000399079 BAG1Q99933 345 aaPredicted RBP14.27□□□□□ -0.12
HLA-DQB1-202ENST00000399079 CINPQ9BW66 212 aaPredicted RBP14.27□□□□□ -0.12
HLA-DQB1-202ENST00000399079 AASDHPPTQ9NRN7 309 aa14.27□□□□□ -0.12
HLA-DQB1-202ENST00000399079 ZFR2Q9UPR6 939 aaKnown RBP14.27□□□□□ -0.12
HLA-DQB1-202ENST00000399079 ITM2BQ9Y287 266 aa14.27□□□□□ -0.12
HLA-DQB1-202ENST00000399079 CA5BQ9Y2D0 317 aa14.27□□□□□ -0.12
HLA-DQB1-202ENST00000399079 ANKRD6Q9Y2G4 727 aa14.27□□□□□ -0.12
HLA-DQB1-202ENST00000399079 FADS3Q9Y5Q0 445 aa14.27□□□□□ -0.12
HLA-DQB1-202ENST00000399079 SNX11Q9Y5W9 270 aa14.27□□□□□ -0.12
HLA-DQB1-202ENST00000399079 ASCC3Q8N3C0 2202 aaKnown RBP14.27□□□□□ -0.13
HLA-DQB1-202ENST00000399079 CNOT1A5YKK6 2376 aaKnown RBP14.26□□□□□ -0.13
HLA-DQB1-202ENST00000399079 C3orf70A6NLC5 250 aaPredicted RBP14.26□□□□□ -0.13
HLA-DQB1-202ENST00000399079 SLC31A1O15431 190 aa14.26□□□□□ -0.13
HLA-DQB1-202ENST00000399079 SPINT1O43278 529 aa14.26□□□□□ -0.13
HLA-DQB1-202ENST00000399079 SPOPO43791 374 aa14.26□□□□□ -0.13
HLA-DQB1-202ENST00000399079 ITIH2P19823 946 aa14.26□□□□□ -0.13
HLA-DQB1-202ENST00000399079 HADHBP55084 474 aaKnown RBP14.26□□□□□ -0.13
HLA-DQB1-202ENST00000399079 GBE1Q04446 702 aa14.26□□□□□ -0.13
HLA-DQB1-202ENST00000399079 RFTN1Q14699 578 aaPredicted RBP14.26□□□□□ -0.13
HLA-DQB1-202ENST00000399079 LBRQ14739 615 aaKnown RBP14.26□□□□□ -0.13
HLA-DQB1-202ENST00000399079 PAFAH1B3Q15102 231 aaKnown RBP14.26□□□□□ -0.13
HLA-DQB1-202ENST00000399079 TEAD4Q15561 434 aa14.26□□□□□ -0.13
HLA-DQB1-202ENST00000399079 HLA-BQ31612 363 aa14.26□□□□□ -0.13
HLA-DQB1-202ENST00000399079 TMCO4Q5TGY1 634 aa14.26□□□□□ -0.13
HLA-DQB1-202ENST00000399079 TTC7BQ86TV6 843 aa14.26□□□□□ -0.13
HLA-DQB1-202ENST00000399079 PRPF39Q86UA1 669 aaKnown RBP14.26□□□□□ -0.13
HLA-DQB1-202ENST00000399079 CAMK1DQ8IU85 385 aa14.26□□□□□ -0.13
HLA-DQB1-202ENST00000399079 NSMCE3Q96MG7 304 aa14.26□□□□□ -0.13
HLA-DQB1-202ENST00000399079 MYOCQ99972 504 aa14.26□□□□□ -0.13
HLA-DQB1-202ENST00000399079 OSBPL1AQ9BXW6 950 aa14.26□□□□□ -0.13
HLA-DQB1-202ENST00000399079 CPEB1Q9BZB8 566 aaKnown RBP14.26□□□□□ -0.13
HLA-DQB1-202ENST00000399079 GAREM1Q9H706 876 aa14.26□□□□□ -0.13
HLA-DQB1-202ENST00000399079 FZD3Q9NPG1 666 aa14.26□□□□□ -0.13
HLA-DQB1-202ENST00000399079 IMPACTQ9P2X3 320 aa14.26□□□□□ -0.13
HLA-DQB1-202ENST00000399079 ALG6Q9Y672 507 aa14.26□□□□□ -0.13
HLA-DQB1-202ENST00000399079 OPHN1O60890 802 aa14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 KCNA4P22459 653 aa14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 CD38P28907 300 aa14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 SLC1A1P43005 524 aa14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 SCNN1BP51168 640 aa14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 SLC10A2Q12908 348 aaPredicted RBP14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 ZNF284Q2VY69 593 aa14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 PRAMEF14Q5SWL7 426 aa14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 NEK5Q6P3R8 708 aa14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 SRLQ86TD4 932 aa14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 HORMAD1Q86X24 394 aa14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 RHOT1Q8IXI2 618 aa14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 PGBD5Q8N414 524 aa14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 RNF25Q96BH1 459 aaPredicted RBP14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 ZNF599Q96NL3 588 aa14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 RNF157Q96PX1 679 aa14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 PSKH2Q96QS6 385 aa14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 ZDHHC5Q9C0B5 715 aa14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 LACRTQ9GZZ8 138 aa14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 SUV39H2Q9H5I1 410 aa14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 LUC7LQ9NQ29 371 aaKnown RBP14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 DNAAF2Q9NVR5 837 aaKnown RBP14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 SEPT3Q9UH03 358 aa14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 FNDC3AQ9Y2H6 1198 aaKnown RBP14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 CACNA1AO00555 2505 aa14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 A0A0A6YYK5 440 aaPredicted RBP14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 A0A1W2PR77 199 aa14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 NEMP1O14524 444 aa14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 IPO7O95373 1038 aaKnown RBP14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 KRT1P04264 644 aa14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 TIMP2P16035 220 aa14.25□□□□□ -0.13
HLA-DQB1-202ENST00000399079 GARSP41250 739 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms