RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 SLC8A2Q9UPR5 921 aa10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 ZNF701M0R085 212 aaPredicted RBP10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 PSMD12O00232 456 aaPredicted RBP10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 FGF10O15520 208 aaPredicted RBP10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 PHGDHO43175 533 aaKnown RBP10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 TRMUO75648 421 aaKnown RBP10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 OR6B1O95007 311 aa10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 MYL3P08590 195 aa10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 C7P10643 843 aa10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 DARSP14868 501 aaKnown RBP10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 ATP6V1B1P15313 513 aa10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 TKTP29401 623 aaKnown RBP10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 LRPAP1P30533 357 aa10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 TTKP33981 857 aa10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 ACADVLP49748 655 aa10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 CLCN5P51795 746 aa10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 INHBCP55103 352 aa10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 HPCAP84074 193 aa10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 MS4A2Q01362 244 aa10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 MGAT5BQ3V5L5 792 aa10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 C6orf52Q5T4I8 152 aa10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 IYDQ6PHW0 289 aa10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 GALNT7Q86SF2 657 aa10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 SLC41A1Q8IVJ1 513 aa10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 CENPLQ8N0S6 344 aaPredicted RBP10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 LSMEM2Q8N112 164 aa10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 ZFP28Q8NHY6 868 aa10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 RMND5BQ96G75 393 aaPredicted RBP10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 ELMO2Q96JJ3 720 aa10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 LPIN3Q9BQK8 851 aa10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 COLEC11Q9BWP8 271 aa10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 EIF2AQ9BY44 585 aaKnown RBP10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 ELP3Q9H9T3 547 aa10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 WDR6Q9NNW5 1121 aaKnown RBP10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 SLC38A7Q9NVC3 462 aa10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 TBC1D13Q9NVG8 400 aa10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 DDIT4Q9NX09 232 aa10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 OR12D3Q9UGF7 316 aa10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 CROTQ9UKG9 612 aa10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 PCDHGA7Q9Y5G6 932 aa10.15□□□□□ -0.78
UBE2D3-208ENST00000394803 TCRBV3S1A0A5B6 114 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 FAM155AB1AL88 458 aaPredicted RBP10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 TRPA1O75762 1119 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 JCHAINP01591 159 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 AHSGP02765 367 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 SBK3P0C264 359 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 NCAM1P13591 858 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 ZNF26P17031 533 aaPredicted RBP10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 HOXB8P17481 243 aaPredicted RBP10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 GLRBP48167 497 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 CXCR3P49682 368 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 CDK9P50750 372 aaKnown RBP10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 NUP107P57740 925 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 RAB15P59190 212 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 LILRA4P59901 499 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 TTLL12Q14166 644 aaPredicted RBP10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 INPP5AQ14642 412 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 SMAD1Q15797 465 aaKnown RBP10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 MYLK3Q32MK0 819 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 MARCH8Q5T0T0 291 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 SYPL2Q5VXT5 272 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 TRIM67Q6ZTA4 783 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 LILRA2Q8N149 483 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 ATPAF2Q8N5M1 289 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 C2CD4AQ8NCU7 369 aaPredicted RBP10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 ZUFSPQ96AP4 578 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 ULBP1Q9BZM6 244 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 SENP6Q9GZR1 1112 aaPredicted RBP10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 OSBPL2Q9H1P3 480 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 MUC13Q9H3R2 512 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 NXF3Q9H4D5 531 aaKnown RBP10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 CATSPERBQ9H7T0 1116 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 VPS45Q9NRW7 570 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 TCAF1Q9Y4C2 921 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 TRIM24O15164 1050 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 RNASEH2AO75792 299 aaKnown RBP10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 IPO13O94829 963 aaKnown RBP10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 BMP10O95393 424 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 AMHP03971 560 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 MMP3P08254 477 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 LTA4HP09960 611 aaKnown RBP10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 RANBP1P43487 201 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 GTF2A2P52657 109 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 MAP3K7CLP57077 242 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 BNIP2Q12982 314 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 IKBKEQ14164 716 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 ACAP2Q15057 778 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 KCTD21Q4G0X4 260 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 IL23RQ5VWK5 629 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 REP15Q6BDI9 236 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 PM20D1Q6GTS8 502 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 BEND5Q7L4P6 421 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 NUP93Q8N1F7 819 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 SCML4Q8N228 414 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 METTL25Q8N6Q8 603 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 ANKFN1Q8N957 763 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 NXNL1Q96CM4 212 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 PPP1R36Q96LQ0 422 aa10.14□□□□□ -0.79
UBE2D3-208ENST00000394803 KLHL32Q96NJ5 620 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms