RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 TCEA3O75764 348 aa7.05□□□□□ -1.28
RTN4-205ENST00000394609 GLUD1P00367 558 aa7.05□□□□□ -1.28
RTN4-205ENST00000394609 CA3P07451 260 aa7.05□□□□□ -1.28
RTN4-205ENST00000394609 MYL4P12829 197 aa7.05□□□□□ -1.28
RTN4-205ENST00000394609 TPSB2P20231 275 aa7.05□□□□□ -1.28
RTN4-205ENST00000394609 GCAP28676 217 aa7.05□□□□□ -1.28
RTN4-205ENST00000394609 MAGEA3P43357 314 aa7.05□□□□□ -1.28
RTN4-205ENST00000394609 PPP3CCP48454 512 aa7.05□□□□□ -1.28
RTN4-205ENST00000394609 SGSHP51688 502 aa7.05□□□□□ -1.28
RTN4-205ENST00000394609 NDST2P52849 883 aa7.05□□□□□ -1.28
RTN4-205ENST00000394609 SH3BGRP55822 239 aaPredicted RBP7.05□□□□□ -1.28
RTN4-205ENST00000394609 NCALDP61601 193 aa7.05□□□□□ -1.28
RTN4-205ENST00000394609 SMAD3P84022 425 aaKnown RBP7.05□□□□□ -1.28
RTN4-205ENST00000394609 CAMK1Q14012 370 aa7.05□□□□□ -1.28
RTN4-205ENST00000394609 POLD3Q15054 466 aaPredicted RBP7.05□□□□□ -1.28
RTN4-205ENST00000394609 TPSAB1Q15661 275 aa7.05□□□□□ -1.28
RTN4-205ENST00000394609 SMAD1Q15797 465 aaKnown RBP7.05□□□□□ -1.28
RTN4-205ENST00000394609 PABPC1LQ4VXU2 614 aaKnown RBP7.05□□□□□ -1.28
RTN4-205ENST00000394609 STXBP5Q5T5C0 1151 aa7.05□□□□□ -1.28
RTN4-205ENST00000394609 RNF43Q68DV7 783 aa7.05□□□□□ -1.28
RTN4-205ENST00000394609 SLC30A9Q6PML9 568 aa7.05□□□□□ -1.28
RTN4-205ENST00000394609 KDELC2Q7Z4H8 507 aa7.05□□□□□ -1.28
RTN4-205ENST00000394609 OR52K2Q8NGK3 314 aa7.05□□□□□ -1.28
RTN4-205ENST00000394609 OR52K1Q8NGK4 314 aa7.05□□□□□ -1.28
RTN4-205ENST00000394609 MDM1Q8TC05 714 aa7.05□□□□□ -1.28
RTN4-205ENST00000394609 BHMTQ93088 406 aa7.05□□□□□ -1.28
RTN4-205ENST00000394609 PABPC5Q96DU9 382 aaKnown RBP7.05□□□□□ -1.28
RTN4-205ENST00000394609 DTNBP1Q96EV8 351 aa7.05□□□□□ -1.28
RTN4-205ENST00000394609 OXNAD1Q96HP4 312 aaPredicted RBP7.05□□□□□ -1.28
RTN4-205ENST00000394609 SIGLEC10Q96LC7 697 aa7.05□□□□□ -1.28
RTN4-205ENST00000394609 PRICKLE1Q96MT3 831 aaPredicted RBP7.05□□□□□ -1.28
RTN4-205ENST00000394609 TMEM237Q96Q45 408 aa7.05□□□□□ -1.28
RTN4-205ENST00000394609 CORO1BQ9BR76 489 aa7.05□□□□□ -1.28
RTN4-205ENST00000394609 HTATIP2Q9BUP3 242 aa7.05□□□□□ -1.28
RTN4-205ENST00000394609 MLPHQ9BV36 600 aaPredicted RBP7.05□□□□□ -1.28
RTN4-205ENST00000394609 FRMD8Q9BZ67 464 aaPredicted RBP7.05□□□□□ -1.28
RTN4-205ENST00000394609 PHACTR1Q9C0D0 580 aa7.05□□□□□ -1.28
RTN4-205ENST00000394609 SMG9Q9H0W8 520 aaKnown RBP7.05□□□□□ -1.28
RTN4-205ENST00000394609 GBA3Q9H227 469 aa7.05□□□□□ -1.28
RTN4-205ENST00000394609 MTIF3Q9H2K0 278 aaKnown RBP7.05□□□□□ -1.28
RTN4-205ENST00000394609 ATXN3LQ9H3M9 355 aa7.05□□□□□ -1.28
RTN4-205ENST00000394609 CERS4Q9HA82 394 aa7.05□□□□□ -1.28
RTN4-205ENST00000394609 PLAC1Q9HBJ0 212 aa7.05□□□□□ -1.28
RTN4-205ENST00000394609 INTS9Q9NV88 658 aaKnown RBP7.05□□□□□ -1.28
RTN4-205ENST00000394609 RBM22Q9NW64 420 aaKnown RBP eCLIP7.05□□□□□ -1.28
RTN4-205ENST00000394609 HCFC1R1Q9NWW0 138 aa7.05□□□□□ -1.28
RTN4-205ENST00000394609 UXTQ9UBK9 157 aaPredicted RBP7.05□□□□□ -1.28
RTN4-205ENST00000394609 ZNF212Q9UDV6 495 aa7.05□□□□□ -1.28
RTN4-205ENST00000394609 AGO1Q9UL18 857 aaKnown RBP7.05□□□□□ -1.28
RTN4-205ENST00000394609 MAFFQ9ULX9 164 aa7.05□□□□□ -1.28
RTN4-205ENST00000394609 ARL2BPQ9Y2Y0 163 aa7.05□□□□□ -1.28
RTN4-205ENST00000394609 ZFP37Q9Y6Q3 630 aaPredicted RBP7.05□□□□□ -1.28
RTN4-205ENST00000394609 MYO16Q9Y6X6 1858 aa7.05□□□□□ -1.28
RTN4-205ENST00000394609 HNRNPCL1O60812 293 aaKnown RBP7.04□□□□□ -1.28
RTN4-205ENST00000394609 CDH16O75309 829 aa7.04□□□□□ -1.28
RTN4-205ENST00000394609 MT-CYBP00156 380 aaPredicted RBP7.04□□□□□ -1.28
RTN4-205ENST00000394609 LMNAP02545 664 aaKnown RBP7.04□□□□□ -1.28
RTN4-205ENST00000394609 CKMP06732 381 aa7.04□□□□□ -1.28
RTN4-205ENST00000394609 RPSAP08865 295 aaKnown RBP7.04□□□□□ -1.28
RTN4-205ENST00000394609 GSTA2P09210 222 aa7.04□□□□□ -1.28
RTN4-205ENST00000394609 CHN1P15882 459 aa7.04□□□□□ -1.28
RTN4-205ENST00000394609 CREB1P16220 341 aa7.04□□□□□ -1.28
RTN4-205ENST00000394609 TPH1P17752 444 aa7.04□□□□□ -1.28
RTN4-205ENST00000394609 MGAT1P26572 445 aa7.04□□□□□ -1.28
RTN4-205ENST00000394609 PHBP35232 272 aa7.04□□□□□ -1.28
RTN4-205ENST00000394609 ETFBP38117 255 aa7.04□□□□□ -1.28
RTN4-205ENST00000394609 CLCN4P51793 760 aa7.04□□□□□ -1.28
RTN4-205ENST00000394609 RPS6KA3P51812 740 aa7.04□□□□□ -1.28
RTN4-205ENST00000394609 CDK16Q00536 496 aa7.04□□□□□ -1.28
RTN4-205ENST00000394609 TMED2Q15363 201 aa7.04□□□□□ -1.28
RTN4-205ENST00000394609 SHHQ15465 462 aa7.04□□□□□ -1.28
RTN4-205ENST00000394609 ADGRF1Q5T601 910 aa7.04□□□□□ -1.28
RTN4-205ENST00000394609 ITPRIPL1Q6GPH6 555 aa7.04□□□□□ -1.28
RTN4-205ENST00000394609 LRRC8BQ6P9F7 803 aa7.04□□□□□ -1.28
RTN4-205ENST00000394609 CES3Q6UWW8 571 aa7.04□□□□□ -1.28
RTN4-205ENST00000394609 UNC5AQ6ZN44 842 aa7.04□□□□□ -1.28
RTN4-205ENST00000394609 CCDC149Q6ZUS6 474 aa7.04□□□□□ -1.28
RTN4-205ENST00000394609 RBM23Q86U06 439 aaKnown RBP7.04□□□□□ -1.28
RTN4-205ENST00000394609 PRPF39Q86UA1 669 aaKnown RBP7.04□□□□□ -1.28
RTN4-205ENST00000394609 EXOC3L1Q86VI1 746 aa7.04□□□□□ -1.28
RTN4-205ENST00000394609 LMNTD2Q8IXW0 634 aa7.04□□□□□ -1.28
RTN4-205ENST00000394609 GALNT15Q8N3T1 639 aa7.04□□□□□ -1.28
RTN4-205ENST00000394609 DNAAF3Q8N9W5 541 aa7.04□□□□□ -1.28
RTN4-205ENST00000394609 ADAMTS19Q8TE59 1207 aa7.04□□□□□ -1.28
RTN4-205ENST00000394609 MRPS31Q92665 395 aaKnown RBP7.04□□□□□ -1.28
RTN4-205ENST00000394609 ARHGEF2Q92974 986 aaKnown RBP7.04□□□□□ -1.28
RTN4-205ENST00000394609 PLD4Q96BZ4 506 aa7.04□□□□□ -1.28
RTN4-205ENST00000394609 POM121Q96HA1 1249 aa7.04□□□□□ -1.28
RTN4-205ENST00000394609 VAT1Q99536 393 aa7.04□□□□□ -1.28
RTN4-205ENST00000394609 EBNA1BP2Q99848 306 aaKnown RBP7.04□□□□□ -1.28
RTN4-205ENST00000394609 LRRC3Q9BY71 257 aa7.04□□□□□ -1.28
RTN4-205ENST00000394609 SP110Q9HB58 689 aa7.04□□□□□ -1.28
RTN4-205ENST00000394609 XAB2Q9HCS7 855 aaKnown RBP7.04□□□□□ -1.28
RTN4-205ENST00000394609 EIF2B3Q9NR50 452 aaKnown RBP7.04□□□□□ -1.28
RTN4-205ENST00000394609 LZTS1Q9Y250 596 aa7.04□□□□□ -1.28
RTN4-205ENST00000394609 ASB3Q9Y575 518 aa7.04□□□□□ -1.28
RTN4-205ENST00000394609 IRAK3Q9Y616 596 aa7.04□□□□□ -1.28
RTN4-205ENST00000394609 CPQQ9Y646 472 aa7.04□□□□□ -1.28
RTN4-205ENST00000394609 NUP205Q92621 2012 aa7.04□□□□□ -1.28
RTN4-205ENST00000394609 PLXNA3P51805 1871 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms