RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 FAM81AQ8TBF8 368 aa16.3■□□□□ 0.2
PCDH1-203ENST00000394536 HEXDCQ8WVB3 486 aa16.3■□□□□ 0.2
PCDH1-203ENST00000394536 GID8Q9NWU2 228 aa16.3■□□□□ 0.2
PCDH1-203ENST00000394536 FAM189A1O60320 539 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 DLX3O60479 287 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 PROZP22891 400 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 XIAPP98170 497 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 GNASQ5JWF2 1037 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 MARC1Q5VT66 337 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 SDHAF4Q5VUM1 108 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 PKN3Q6P5Z2 889 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 ZYG11AQ6WRX3 759 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 ADCY4Q8NFM4 1077 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 OR9I1Q8NGQ6 314 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 CCDC126Q96EE4 140 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 BTBD9Q96Q07 612 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 SPAG4Q9NPE6 437 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 SLC38A7Q9NVC3 462 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 SLX4Q8IY92 1834 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 STRCQ7RTU9 1775 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 ENDOD1O94919 500 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 CD86P42081 329 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 LHX1P48742 406 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 CDH15P55291 814 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 EFEMP1Q12805 493 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 ADGRE1Q14246 886 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 CAPRIN1Q14444 709 aaKnown RBP16.29■□□□□ 0.2
PCDH1-203ENST00000394536 TAZQ16635 292 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 PAOXQ6QHF9 649 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 FRA10AC1Q70Z53 315 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 CUZD1Q86UP6 607 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 FAM35AQ86V20 835 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 NRBF2Q96F24 287 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 FAR2Q96K12 515 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 SNX27Q96L92 541 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 MRPL57Q9BQC6 102 aaKnown RBP16.29■□□□□ 0.2
PCDH1-203ENST00000394536 SEMA4BQ9NPR2 832 aaPredicted RBP16.29■□□□□ 0.2
PCDH1-203ENST00000394536 IGSF9Q9P2J2 1179 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 SLC2A6Q9UGQ3 507 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 H3BSA7 217 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 PDHXO00330 501 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 SMIM10L2AP0DMW4 78 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 SMIM10L2BP0DMW5 78 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 CHRM3P20309 590 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 FASP25445 335 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 CXCR3P49682 368 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 ZBTB17Q13105 803 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 ZIK1Q3SY52 487 aaPredicted RBP16.29■□□□□ 0.2
PCDH1-203ENST00000394536 ARHGAP17Q68EM7 881 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 ZNF534Q76KX8 674 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 DCBLD1Q8N8Z6 715 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 ACVR1CQ8NER5 493 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 TRPC4APQ8TEL6 797 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 HDAC10Q969S8 669 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 SORT1Q99523 831 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 NDUFAF1Q9Y375 327 aa16.29■□□□□ 0.2
PCDH1-203ENST00000394536 COPG1Q9Y678 874 aaKnown RBP16.29■□□□□ 0.2
PCDH1-203ENST00000394536 IGKV6-21A0A0C4DH24 114 aa16.28■□□□□ 0.2
PCDH1-203ENST00000394536 ARHGAP1Q07960 439 aa16.28■□□□□ 0.2
PCDH1-203ENST00000394536 MAGEE2Q8TD90 523 aaPredicted RBP16.28■□□□□ 0.2
PCDH1-203ENST00000394536 GBA3Q9H227 469 aa16.28■□□□□ 0.2
PCDH1-203ENST00000394536 VTA1Q9NP79 307 aa16.28■□□□□ 0.2
PCDH1-203ENST00000394536 RCOR3Q9P2K3 495 aaPredicted RBP16.28■□□□□ 0.2
PCDH1-203ENST00000394536 CDK5RAP2Q96SN8 1893 aa16.28■□□□□ 0.2
PCDH1-203ENST00000394536 MATN2O00339 956 aa16.28■□□□□ 0.2
PCDH1-203ENST00000394536 PFDN6O15212 129 aa16.28■□□□□ 0.2
PCDH1-203ENST00000394536 WNT3AP56704 352 aa16.28■□□□□ 0.2
PCDH1-203ENST00000394536 DCTN2Q13561 401 aaKnown RBP16.28■□□□□ 0.2
PCDH1-203ENST00000394536 CES4AQ5XG92 561 aa16.28■□□□□ 0.2
PCDH1-203ENST00000394536 CNSTQ6PJW8 725 aa16.28■□□□□ 0.2
PCDH1-203ENST00000394536 ARNTL2Q8WYA1 636 aa16.28■□□□□ 0.2
PCDH1-203ENST00000394536 CD274Q9NZQ7 290 aa16.28■□□□□ 0.2
PCDH1-203ENST00000394536 RNF112Q9ULX5 631 aa16.28■□□□□ 0.2
PCDH1-203ENST00000394536 ADAMTS5Q9UNA0 930 aa16.28■□□□□ 0.2
PCDH1-203ENST00000394536 TRAF6Q9Y4K3 522 aa16.28■□□□□ 0.2
PCDH1-203ENST00000394536 EP400Q96L91 3159 aa16.28■□□□□ 0.2
PCDH1-203ENST00000394536 ADCY6O43306 1168 aa16.28■□□□□ 0.2
PCDH1-203ENST00000394536 NRP2O60462 931 aa16.28■□□□□ 0.2
PCDH1-203ENST00000394536 LTA4HP09960 611 aaKnown RBP16.28■□□□□ 0.2
PCDH1-203ENST00000394536 HSPA1AP0DMV8 641 aaKnown RBP16.28■□□□□ 0.2
PCDH1-203ENST00000394536 HSPA1BP0DMV9 641 aaKnown RBP16.28■□□□□ 0.2
PCDH1-203ENST00000394536 DARSP14868 501 aaKnown RBP16.28■□□□□ 0.2
PCDH1-203ENST00000394536 GLUD2P49448 558 aa16.28■□□□□ 0.2
PCDH1-203ENST00000394536 HARS2P49590 506 aaKnown RBP16.28■□□□□ 0.2
PCDH1-203ENST00000394536 PTGR2Q8N8N7 351 aaPredicted RBP16.28■□□□□ 0.2
PCDH1-203ENST00000394536 PCED1BQ96HM7 432 aa16.28■□□□□ 0.2
PCDH1-203ENST00000394536 TEKT5Q96M29 485 aa16.28■□□□□ 0.2
PCDH1-203ENST00000394536 ATXN10Q9UBB4 475 aa16.28■□□□□ 0.2
PCDH1-203ENST00000394536 BAG5Q9UL15 447 aa16.28■□□□□ 0.2
PCDH1-203ENST00000394536 IPPQ9Y573 584 aa16.28■□□□□ 0.2
PCDH1-203ENST00000394536 E7ENX8 843 aa16.27■□□□□ 0.2
PCDH1-203ENST00000394536 TREHO43280 583 aa16.27■□□□□ 0.2
PCDH1-203ENST00000394536 PYGLP06737 847 aa16.27■□□□□ 0.2
PCDH1-203ENST00000394536 CEACAM7Q14002 265 aa16.27■□□□□ 0.2
PCDH1-203ENST00000394536 PPTC7Q8NI37 304 aa16.27■□□□□ 0.2
PCDH1-203ENST00000394536 SMARCD1Q96GM5 515 aa16.27■□□□□ 0.2
PCDH1-203ENST00000394536 FCRL2Q96LA5 508 aaPredicted RBP16.27■□□□□ 0.2
PCDH1-203ENST00000394536 RNF145Q96MT1 663 aa16.27■□□□□ 0.2
PCDH1-203ENST00000394536 EGFL8Q99944 293 aa16.27■□□□□ 0.2
PCDH1-203ENST00000394536 MRPS26Q9BYN8 205 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms