RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 NCKIPSDQ9NZQ3 722 aa19.05■□□□□ 0.64
CBX1-202ENST00000393408 SLC2A6Q9UGQ3 507 aa19.05■□□□□ 0.64
CBX1-202ENST00000393408 TCAF1Q9Y4C2 921 aa19.05■□□□□ 0.64
CBX1-202ENST00000393408 MEIS3P2A8K0S8 358 aa19.05■□□□□ 0.64
CBX1-202ENST00000393408 ANXA9O76027 345 aa19.05■□□□□ 0.64
CBX1-202ENST00000393408 DNAJB13P59910 316 aa19.05■□□□□ 0.64
CBX1-202ENST00000393408 RWDD4Q6NW29 188 aaKnown RBP19.05■□□□□ 0.64
CBX1-202ENST00000393408 HEXDCQ8WVB3 486 aa19.05■□□□□ 0.64
CBX1-202ENST00000393408 ELMO2Q96JJ3 720 aa19.05■□□□□ 0.64
CBX1-202ENST00000393408 IL12RB2Q99665 862 aa19.05■□□□□ 0.64
CBX1-202ENST00000393408 POMKQ9H5K3 350 aa19.05■□□□□ 0.64
CBX1-202ENST00000393408 SUDS3Q9H7L9 328 aaPredicted RBP19.05■□□□□ 0.64
CBX1-202ENST00000393408 CDH9Q9ULB4 789 aa19.05■□□□□ 0.64
CBX1-202ENST00000393408 BPTFQ12830 3046 aa19.04■□□□□ 0.64
CBX1-202ENST00000393408 A0A087X1B8 175 aa19.04■□□□□ 0.64
CBX1-202ENST00000393408 TFAP2AP05549 437 aa19.04■□□□□ 0.64
CBX1-202ENST00000393408 ADRA1AP35348 466 aa19.04■□□□□ 0.64
CBX1-202ENST00000393408 RPL5P46777 297 aaKnown RBP19.04■□□□□ 0.64
CBX1-202ENST00000393408 PSEN2P49810 448 aa19.04■□□□□ 0.64
CBX1-202ENST00000393408 CLCN2P51788 898 aa19.04■□□□□ 0.64
CBX1-202ENST00000393408 ATXN3P54252 364 aaPredicted RBP19.04■□□□□ 0.64
CBX1-202ENST00000393408 CNSTQ6PJW8 725 aa19.04■□□□□ 0.64
CBX1-202ENST00000393408 POTEHQ6S545 545 aa19.04■□□□□ 0.64
CBX1-202ENST00000393408 TRIM67Q6ZTA4 783 aa19.04■□□□□ 0.64
CBX1-202ENST00000393408 SPATA24Q86W54 205 aa19.04■□□□□ 0.64
CBX1-202ENST00000393408 ATPAF2Q8N5M1 289 aa19.04■□□□□ 0.64
CBX1-202ENST00000393408 C2CD4AQ8NCU7 369 aaPredicted RBP19.04■□□□□ 0.64
CBX1-202ENST00000393408 CEP70Q8NHQ1 597 aa19.04■□□□□ 0.64
CBX1-202ENST00000393408 PTCD2Q8WV60 388 aaKnown RBP19.04■□□□□ 0.64
CBX1-202ENST00000393408 IRGQQ8WZA9 623 aa19.04■□□□□ 0.64
CBX1-202ENST00000393408 RNF34Q969K3 372 aa19.04■□□□□ 0.64
CBX1-202ENST00000393408 SLC10A4Q96EP9 437 aa19.04■□□□□ 0.64
CBX1-202ENST00000393408 SGF29Q96ES7 293 aa19.04■□□□□ 0.64
CBX1-202ENST00000393408 MRM3Q9HC36 420 aaKnown RBP19.04■□□□□ 0.64
CBX1-202ENST00000393408 CSNK1G1Q9HCP0 422 aa19.04■□□□□ 0.64
CBX1-202ENST00000393408 UTP6Q9NYH9 597 aaKnown RBP19.04■□□□□ 0.64
CBX1-202ENST00000393408 CLIC5Q9NZA1 410 aa19.04■□□□□ 0.64
CBX1-202ENST00000393408 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.04■□□□□ 0.64
CBX1-202ENST00000393408 GNEQ9Y223 722 aaKnown RBP19.04■□□□□ 0.64
CBX1-202ENST00000393408 BTBD19C9JJ37 291 aa19.04■□□□□ 0.64
CBX1-202ENST00000393408 TRIM38O00635 465 aa19.04■□□□□ 0.64
CBX1-202ENST00000393408 ATP5F1P24539 256 aaPredicted RBP19.04■□□□□ 0.64
CBX1-202ENST00000393408 GK5Q6ZS86 529 aa19.04■□□□□ 0.64
CBX1-202ENST00000393408 AHI1Q8N157 1196 aa19.04■□□□□ 0.64
CBX1-202ENST00000393408 TMEM102Q8N9M5 508 aaPredicted RBP19.04■□□□□ 0.64
CBX1-202ENST00000393408 DQX1Q8TE96 717 aaKnown RBP19.04■□□□□ 0.64
CBX1-202ENST00000393408 TREX1Q9NSU2 369 aa19.04■□□□□ 0.64
CBX1-202ENST00000393408 LZTS1Q9Y250 596 aa19.04■□□□□ 0.64
CBX1-202ENST00000393408 A0A1B0GVG6 124 aa19.03■□□□□ 0.64
CBX1-202ENST00000393408 HAS3O00219 553 aa19.03■□□□□ 0.64
CBX1-202ENST00000393408 CLPTM1O96005 669 aa19.03■□□□□ 0.64
CBX1-202ENST00000393408 CD151P48509 253 aa19.03■□□□□ 0.64
CBX1-202ENST00000393408 MYBPC1Q00872 1141 aa19.03■□□□□ 0.64
CBX1-202ENST00000393408 SULT2A1Q06520 285 aa19.03■□□□□ 0.64
CBX1-202ENST00000393408 PTK2BQ14289 1009 aa19.03■□□□□ 0.64
CBX1-202ENST00000393408 R3HDM1Q15032 1099 aaKnown RBP19.03■□□□□ 0.64
CBX1-202ENST00000393408 PRAMEF19Q5SWL8 479 aa19.03■□□□□ 0.64
CBX1-202ENST00000393408 CHSY3Q70JA7 882 aa19.03■□□□□ 0.64
CBX1-202ENST00000393408 C3orf58Q8NDZ4 430 aa19.03■□□□□ 0.64
CBX1-202ENST00000393408 DGCR14Q96DF8 476 aaKnown RBP19.03■□□□□ 0.64
CBX1-202ENST00000393408 CNBD2Q96M20 576 aa19.03■□□□□ 0.64
CBX1-202ENST00000393408 NDNQ99608 321 aa19.03■□□□□ 0.64
CBX1-202ENST00000393408 ZNF696Q9H7X3 374 aa19.03■□□□□ 0.64
CBX1-202ENST00000393408 SLC38A7Q9NVC3 462 aa19.03■□□□□ 0.64
CBX1-202ENST00000393408 PLK2Q9NYY3 685 aa19.03■□□□□ 0.64
CBX1-202ENST00000393408 GTSE1Q9NYZ3 720 aa19.03■□□□□ 0.64
CBX1-202ENST00000393408 SLC45A1Q9Y2W3 748 aa19.03■□□□□ 0.64
CBX1-202ENST00000393408 KCNU1A8MYU2 1149 aa19.03■□□□□ 0.64
CBX1-202ENST00000393408 HSPA13P48723 471 aa19.03■□□□□ 0.64
CBX1-202ENST00000393408 CLCNKBP51801 687 aa19.03■□□□□ 0.64
CBX1-202ENST00000393408 GEMP55040 296 aa19.03■□□□□ 0.64
CBX1-202ENST00000393408 SH3BGRP55822 239 aaPredicted RBP19.03■□□□□ 0.64
CBX1-202ENST00000393408 CDKL1Q00532 357 aa19.03■□□□□ 0.64
CBX1-202ENST00000393408 GK3PQ14409 553 aa19.03■□□□□ 0.64
CBX1-202ENST00000393408 ZNF470Q6ECI4 717 aa19.03■□□□□ 0.64
CBX1-202ENST00000393408 FAM156AQ8NDB6 213 aa19.03■□□□□ 0.64
CBX1-202ENST00000393408 LENG1Q96BZ8 264 aaPredicted RBP19.03■□□□□ 0.64
CBX1-202ENST00000393408 MRPL1Q9BYD6 325 aaKnown RBP19.03■□□□□ 0.64
CBX1-202ENST00000393408 SIK2Q9H0K1 926 aa19.03■□□□□ 0.64
CBX1-202ENST00000393408 IGSF5Q9NSI5 407 aa19.03■□□□□ 0.64
CBX1-202ENST00000393408 PCDHGA7Q9Y5G6 932 aa19.03■□□□□ 0.64
CBX1-202ENST00000393408 NEMP2A6NFY4 417 aa19.02■□□□□ 0.64
CBX1-202ENST00000393408 MAFKO60675 156 aa19.02■□□□□ 0.64
CBX1-202ENST00000393408 RNASEH2AO75792 299 aaKnown RBP19.02■□□□□ 0.64
CBX1-202ENST00000393408 HNRNPLP14866 589 aaKnown RBP eCLIP19.02■□□□□ 0.64
CBX1-202ENST00000393408 CYP2C18P33260 490 aa19.02■□□□□ 0.64
CBX1-202ENST00000393408 PSMD8P48556 350 aa19.02■□□□□ 0.64
CBX1-202ENST00000393408 KPNA2P52292 529 aaKnown RBP19.02■□□□□ 0.64
CBX1-202ENST00000393408 PSME3P61289 254 aa19.02■□□□□ 0.64
CBX1-202ENST00000393408 POU4F1Q01851 419 aa19.02■□□□□ 0.64
CBX1-202ENST00000393408 BIRC2Q13490 618 aa19.02■□□□□ 0.64
CBX1-202ENST00000393408 SLC5A9Q2M3M2 681 aa19.02■□□□□ 0.64
CBX1-202ENST00000393408 KIAA0930Q6ICG6 404 aaPredicted RBP19.02■□□□□ 0.64
CBX1-202ENST00000393408 HMGCLL1Q8TB92 370 aa19.02■□□□□ 0.64
CBX1-202ENST00000393408 ASB9Q96DX5 294 aa19.02■□□□□ 0.64
CBX1-202ENST00000393408 MRPS26Q9BYN8 205 aaKnown RBP19.02■□□□□ 0.64
CBX1-202ENST00000393408 ZCWPW1Q9H0M4 648 aa19.02■□□□□ 0.64
CBX1-202ENST00000393408 FBXO5Q9UKT4 447 aa19.02■□□□□ 0.64
CBX1-202ENST00000393408 VILLO15195 856 aa19.02■□□□□ 0.63
CBX1-202ENST00000393408 MATN3O15232 486 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms