RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 HNRNPDQ14103 355 aaKnown RBP20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 UBAP2LQ14157 1087 aaKnown RBP20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 BRMS1LQ5PSV4 323 aa20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 TPGS2Q68CL5 300 aa20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 ZCCHC23Q6ZST2 131 aa20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 C14orf80Q86SX3 495 aa20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 GALNT15Q8N3T1 639 aa20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 PPP1R14CQ8TAE6 165 aa20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 TFB1MQ8WVM0 346 aaKnown RBP20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 OLFM3Q96PB7 478 aa20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 TRIM56Q9BRZ2 755 aaKnown RBP20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 PRDM12Q9H4Q4 367 aa20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 PRDM16Q9HAZ2 1276 aa20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 EIF2B3Q9NR50 452 aaKnown RBP20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 PAPOLBQ9NRJ5 636 aaKnown RBP20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 DCDC2Q9UHG0 476 aa20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 DNAJC16Q9Y2G8 782 aa20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 MYO9BQ13459 2157 aa20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 EME2A4GXA9 379 aaPredicted RBP20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 LILRB3O75022 631 aa20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 SERPINE1P05121 402 aa20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 CTSAP10619 480 aa20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 HMGA1P17096 107 aaKnown RBP20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 SLC1A6P48664 564 aa20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 ROR2Q01974 943 aaKnown RBP20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 BTKQ06187 659 aa20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 HEATR6Q6AI08 1181 aaKnown RBP20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 MSANTD2Q6P1R3 559 aa20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 PACS1Q6VY07 963 aa20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 SPPL3Q8TCT6 385 aa20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 POF1BQ8WVV4 589 aa20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 CDKL2Q92772 493 aa20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 HAPLN3Q96S86 360 aa20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 TCF25Q9BQ70 676 aa20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 OSBPL2Q9H1P3 480 aa20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 ZDHHC7Q9NXF8 308 aa20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 MPP6Q9NZW5 540 aa20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.14■□□□□ 0.81
CSNK1D-203ENST00000392334 BUD23O43709 281 aaKnown RBP20.14■□□□□ 0.81
CSNK1D-203ENST00000392334 CXCL14O95715 111 aa20.14■□□□□ 0.81
CSNK1D-203ENST00000392334 ALDOAP04075 364 aaKnown RBP20.14■□□□□ 0.81
CSNK1D-203ENST00000392334 GRK2P25098 689 aa20.14■□□□□ 0.81
CSNK1D-203ENST00000392334 PPP2R5DQ14738 602 aa20.14■□□□□ 0.81
CSNK1D-203ENST00000392334 PAFAH1B3Q15102 231 aaKnown RBP20.14■□□□□ 0.81
CSNK1D-203ENST00000392334 N4BP2L1Q5TBK1 243 aaPredicted RBP20.14■□□□□ 0.81
CSNK1D-203ENST00000392334 PIK3R6Q5UE93 754 aa20.14■□□□□ 0.81
CSNK1D-203ENST00000392334 RNF220Q5VTB9 566 aa20.14■□□□□ 0.81
CSNK1D-203ENST00000392334 CWF19L1Q69YN2 538 aaKnown RBP20.14■□□□□ 0.81
CSNK1D-203ENST00000392334 LRRC8BQ6P9F7 803 aa20.14■□□□□ 0.81
CSNK1D-203ENST00000392334 IZUMO2Q6UXV1 221 aa20.14■□□□□ 0.81
CSNK1D-203ENST00000392334 ATP2A3Q93084 1043 aa20.14■□□□□ 0.81
CSNK1D-203ENST00000392334 SLC39A13Q96H72 371 aa20.14■□□□□ 0.81
CSNK1D-203ENST00000392334 NACA2Q9H009 215 aa20.14■□□□□ 0.81
CSNK1D-203ENST00000392334 APOBEC2Q9Y235 224 aaKnown RBP20.14■□□□□ 0.81
CSNK1D-203ENST00000392334 A0A0A0MRY4 1105 aa20.14■□□□□ 0.81
CSNK1D-203ENST00000392334 GRM6O15303 877 aa20.14■□□□□ 0.81
CSNK1D-203ENST00000392334 ITM2AO43736 263 aa20.14■□□□□ 0.81
CSNK1D-203ENST00000392334 ZDHHC11BP0C7U3 371 aa20.14■□□□□ 0.81
CSNK1D-203ENST00000392334 GRIA1P42261 906 aa20.14■□□□□ 0.81
CSNK1D-203ENST00000392334 HCAR3P49019 387 aa20.14■□□□□ 0.81
CSNK1D-203ENST00000392334 PCLAFQ15004 111 aa20.14■□□□□ 0.81
CSNK1D-203ENST00000392334 THEMIS2Q5TEJ8 643 aa20.14■□□□□ 0.81
CSNK1D-203ENST00000392334 HTR3CQ8WXA8 447 aa20.14■□□□□ 0.81
CSNK1D-203ENST00000392334 PPP2R3CQ969Q6 453 aa20.14■□□□□ 0.81
CSNK1D-203ENST00000392334 SPATA13Q96N96 652 aa20.14■□□□□ 0.81
CSNK1D-203ENST00000392334 TTLL2Q9BWV7 592 aa20.14■□□□□ 0.81
CSNK1D-203ENST00000392334 S100A14Q9HCY8 104 aa20.14■□□□□ 0.81
CSNK1D-203ENST00000392334 NDFIP2Q9NV92 336 aa20.14■□□□□ 0.81
CSNK1D-203ENST00000392334 VANGL2Q9ULK5 521 aa20.14■□□□□ 0.81
CSNK1D-203ENST00000392334 NEU3Q9UQ49 428 aa20.14■□□□□ 0.81
CSNK1D-203ENST00000392334 PLXNA3P51805 1871 aa20.13■□□□□ 0.81
CSNK1D-203ENST00000392334 HIDE1A8MVS5 230 aa20.13■□□□□ 0.81
CSNK1D-203ENST00000392334 TGM5O43548 720 aa20.13■□□□□ 0.81
CSNK1D-203ENST00000392334 LYNP07948 512 aa20.13■□□□□ 0.81
CSNK1D-203ENST00000392334 KCNQ1P51787 676 aa20.13■□□□□ 0.81
CSNK1D-203ENST00000392334 CAMK1Q14012 370 aa20.13■□□□□ 0.81
CSNK1D-203ENST00000392334 PDE1CQ14123 709 aaPredicted RBP20.13■□□□□ 0.81
CSNK1D-203ENST00000392334 PGM2L1Q6PCE3 622 aa20.13■□□□□ 0.81
CSNK1D-203ENST00000392334 PHC3Q8NDX5 983 aa20.13■□□□□ 0.81
CSNK1D-203ENST00000392334 P2RY11Q96G91 374 aa20.13■□□□□ 0.81
CSNK1D-203ENST00000392334 NAT9Q9BTE0 207 aa20.13■□□□□ 0.81
CSNK1D-203ENST00000392334 PPM1HQ9ULR3 514 aa20.13■□□□□ 0.81
CSNK1D-203ENST00000392334 ZNF840PA6NDX5 716 aa20.12■□□□□ 0.81
CSNK1D-203ENST00000392334 E9PAM4 449 aa20.12■□□□□ 0.81
CSNK1D-203ENST00000392334 KCNK1O00180 336 aa20.12■□□□□ 0.81
CSNK1D-203ENST00000392334 TPP1O14773 563 aa20.12■□□□□ 0.81
CSNK1D-203ENST00000392334 TOP3BO95985 862 aaKnown RBP20.12■□□□□ 0.81
CSNK1D-203ENST00000392334 PROCP04070 461 aa20.12■□□□□ 0.81
CSNK1D-203ENST00000392334 PGAM1P18669 254 aa20.12■□□□□ 0.81
CSNK1D-203ENST00000392334 CDC16Q13042 620 aa20.12■□□□□ 0.81
CSNK1D-203ENST00000392334 FOXB2Q5VYV0 432 aa20.12■□□□□ 0.81
CSNK1D-203ENST00000392334 PLPP4Q5VZY2 271 aa20.12■□□□□ 0.81
CSNK1D-203ENST00000392334 JADE3Q92613 823 aa20.12■□□□□ 0.81
CSNK1D-203ENST00000392334 ENTPD7Q9NQZ7 604 aa20.12■□□□□ 0.81
CSNK1D-203ENST00000392334 OLA1Q9NTK5 396 aaKnown RBP20.12■□□□□ 0.81
CSNK1D-203ENST00000392334 COMMD8Q9NX08 183 aa20.12■□□□□ 0.81
CSNK1D-203ENST00000392334 GREB1Q4ZG55 1949 aa20.12■□□□□ 0.81
CSNK1D-203ENST00000392334 EYSQ5T1H1 3165 aa20.12■□□□□ 0.81
CSNK1D-203ENST00000392334 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.12■□□□□ 0.81
CSNK1D-203ENST00000392334 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms