RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 SIRPB2Q5JXA9 342 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 ENTPD8Q5MY95 495 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 DCAF10Q5QP82 559 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 WLSQ5T9L3 541 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 FAAH2Q6GMR7 532 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 HEPHL1Q6MZM0 1159 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 PHLDB3Q6NSJ2 640 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 SPATA8Q6RVD6 105 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 KLHL24Q6TFL4 600 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 IL27RAQ6UWB1 636 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 CCNI2Q6ZMN8 369 aaPredicted RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 Q6ZSR9 355 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 SH2D5Q6ZV89 423 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 Q6ZVL8 140 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 KCTD8Q6ZWB6 473 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 CYB5R4Q7L1T6 521 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 EEPD1Q7L9B9 569 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 NECAB2Q7Z6G3 386 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 USP37Q86T82 979 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 IGFN1Q86VF2 1251 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 HERC6Q8IVU3 1022 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 IZUMO1Q8IYV9 350 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 FAM185AQ8N0U4 392 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 GPC2Q8N158 579 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF786Q8N393 782 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 CERS5Q8N5B7 392 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF491Q8N8L2 437 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 TMEM87AQ8NBN3 555 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 NEXN-AS1Q8NBZ9 246 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 SRFBP1Q8NEF9 429 aaKnown RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 MCPH1Q8NEM0 835 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 IL17RDQ8NFM7 739 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 OR2L5Q8NG80 312 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 EXD1Q8NHP7 514 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 KCNG4Q8TDN1 519 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 AFAP1L1Q8TED9 768 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 AGAP11Q8TF27 550 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 SETD7Q8WTS6 366 aaKnown RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 SLC35F5Q8WV83 523 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 PSPC1Q8WXF1 523 aaKnown RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 RTF1Q92541 710 aaKnown RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 GTF3AQ92664 365 aaKnown RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 HOXB13Q92826 284 aaPredicted RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 PTPRN2Q92932 1015 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 PHKBQ93100 1093 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 IGSF8Q969P0 613 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 PBXIP1Q96AQ6 731 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 ARSGQ96EG1 525 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 MFSD3Q96ES6 412 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 AHCYL2Q96HN2 611 aaKnown RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 KAZALD1Q96I82 304 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 GFM1Q96RP9 751 aaKnown RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 USP28Q96RU2 1077 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 DUSP9Q99956 384 aaKnown RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 ZNF2Q9BSG1 426 aaPredicted RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 MMTAG2Q9BU76 263 aaKnown RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 MAK16Q9BXY0 300 aaKnown RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 LDHAL6BQ9BYZ2 381 aaPredicted RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 TRIM2Q9C040 744 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 TANGO6Q9C0B7 1094 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 WWTR1Q9GZV5 400 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 TFB2MQ9H5Q4 396 aaKnown RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 TRIM45Q9H8W5 580 aaPredicted RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 PLEKHA5Q9HAU0 1116 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 GNB4Q9HAV0 340 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 USP29Q9HBJ7 922 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 PNRC2Q9NPJ4 139 aaKnown RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 TRIM36Q9NQ86 728 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 FSCN3Q9NQT6 498 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 CNNM1Q9NRU3 951 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 RLIMQ9NVW2 624 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 ADPRHL2Q9NX46 363 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 DUS2Q9NX74 493 aaKnown RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 PDP2Q9P2J9 529 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 MGAT4CQ9UBM8 478 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 LPAR3Q9UBY5 353 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 PPP1R1BQ9UD71 204 aaPredicted RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 Q9UF83 564 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 PRSS50Q9UI38 385 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 PHF11Q9UIL8 331 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 CRLS1Q9UJA2 301 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 FZD4Q9ULV1 537 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 SUFUQ9UMX1 484 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 SLC45A2Q9UMX9 530 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 PSG11Q9UQ72 335 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 COQ6Q9Y2Z9 468 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 PAM16Q9Y3D7 125 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 NAALAD2Q9Y3Q0 740 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 PLEKHM1Q9Y4G2 1056 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 TRAF6Q9Y4K3 522 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 RAI2Q9Y5P3 530 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 CDY2AQ9Y6F7 541 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 SLIT3O75094 1523 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 EPPK1P58107 5090 aaKnown RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 HMCN2Q8NDA2 5059 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 PCNX3Q9H6A9 2034 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 COL1A1P02452 1464 aaPredicted RBP-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 CACNA1AO00555 2505 aa-0.3□□□□□ -2.46
TRAJ28-201ENST00000390509 HSPG2P98160 4391 aa-0.3□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms