RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 HLA-DPA1P20036 260 aa25.46■■□□□ 1.67
SHOX2-201ENST00000389589 ARNTP27540 789 aa25.46■■□□□ 1.67
SHOX2-201ENST00000389589 MSLNQ13421 630 aaPredicted RBP25.46■■□□□ 1.67
SHOX2-201ENST00000389589 CCDC153Q494R4 210 aa25.46■■□□□ 1.67
SHOX2-201ENST00000389589 SIRPB2Q5JXA9 342 aa25.46■■□□□ 1.67
SHOX2-201ENST00000389589 TSTD2Q5T7W7 516 aa25.46■■□□□ 1.67
SHOX2-201ENST00000389589 SPATA31D4Q6ZUB0 917 aa25.46■■□□□ 1.67
SHOX2-201ENST00000389589 MECRQ9BV79 373 aa25.46■■□□□ 1.67
SHOX2-201ENST00000389589 CINPQ9BW66 212 aaPredicted RBP25.46■■□□□ 1.67
SHOX2-201ENST00000389589 SLC2A6Q9UGQ3 507 aa25.46■■□□□ 1.67
SHOX2-201ENST00000389589 MUSKO15146 869 aa25.46■■□□□ 1.67
SHOX2-201ENST00000389589 CXCL14O95715 111 aa25.46■■□□□ 1.67
SHOX2-201ENST00000389589 FGF1P05230 155 aa25.46■■□□□ 1.67
SHOX2-201ENST00000389589 ADH1AP07327 375 aa25.46■■□□□ 1.67
SHOX2-201ENST00000389589 SCTRP47872 440 aa25.46■■□□□ 1.67
SHOX2-201ENST00000389589 TMPRSS15P98073 1019 aa25.46■■□□□ 1.67
SHOX2-201ENST00000389589 CDK18Q07002 472 aa25.46■■□□□ 1.67
SHOX2-201ENST00000389589 PPM1JQ5JR12 505 aa25.46■■□□□ 1.67
SHOX2-201ENST00000389589 CMC1Q7Z7K0 106 aa25.46■■□□□ 1.67
SHOX2-201ENST00000389589 KLHL23Q8NBE8 558 aa25.46■■□□□ 1.67
SHOX2-201ENST00000389589 CALML6Q8TD86 181 aa25.46■■□□□ 1.67
SHOX2-201ENST00000389589 C7orf26Q96N11 449 aa25.46■■□□□ 1.67
SHOX2-201ENST00000389589 CYP2S1Q96SQ9 504 aa25.46■■□□□ 1.67
SHOX2-201ENST00000389589 NPHS2Q9NP85 383 aa25.46■■□□□ 1.67
SHOX2-201ENST00000389589 PRKAG2Q9UGJ0 569 aa25.46■■□□□ 1.67
SHOX2-201ENST00000389589 MTCL1Q9Y4B5 1905 aaKnown RBP25.45■■□□□ 1.67
SHOX2-201ENST00000389589 DCTN3O75935 186 aa25.45■■□□□ 1.66
SHOX2-201ENST00000389589 TOP3BO95985 862 aaKnown RBP25.45■■□□□ 1.66
SHOX2-201ENST00000389589 ATXN1LP0C7T5 689 aaKnown RBP25.45■■□□□ 1.66
SHOX2-201ENST00000389589 CHI3L2Q15782 390 aa25.45■■□□□ 1.66
SHOX2-201ENST00000389589 LILRA6Q6PI73 481 aa25.45■■□□□ 1.66
SHOX2-201ENST00000389589 ARL14EPQ8N8R7 260 aaPredicted RBP25.45■■□□□ 1.66
SHOX2-201ENST00000389589 PPM1EQ8WY54 764 aa25.45■■□□□ 1.66
SHOX2-201ENST00000389589 MRPS31Q92665 395 aaKnown RBP25.45■■□□□ 1.66
SHOX2-201ENST00000389589 THOC1Q96FV9 657 aaKnown RBP25.45■■□□□ 1.66
SHOX2-201ENST00000389589 A0A096LPK6 155 aa25.44■■□□□ 1.66
SHOX2-201ENST00000389589 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.44■■□□□ 1.66
SHOX2-201ENST00000389589 TTC24A2A3L6 582 aaPredicted RBP25.44■■□□□ 1.66
SHOX2-201ENST00000389589 TYW5A2RUC4 315 aaKnown RBP25.44■■□□□ 1.66
SHOX2-201ENST00000389589 AHSGP02765 367 aa25.44■■□□□ 1.66
SHOX2-201ENST00000389589 CES1P23141 567 aa25.44■■□□□ 1.66
SHOX2-201ENST00000389589 FPGSQ05932 587 aa25.44■■□□□ 1.66
SHOX2-201ENST00000389589 SETDB1Q15047 1291 aa25.44■■□□□ 1.66
SHOX2-201ENST00000389589 SPRED3Q2MJR0 410 aa25.44■■□□□ 1.66
SHOX2-201ENST00000389589 TXNDC8Q6A555 127 aa25.44■■□□□ 1.66
SHOX2-201ENST00000389589 KIAA0408Q6ZU52 694 aa25.44■■□□□ 1.66
SHOX2-201ENST00000389589 TMC7Q7Z402 723 aa25.44■■□□□ 1.66
SHOX2-201ENST00000389589 C10orf67Q8IYJ2 551 aa25.44■■□□□ 1.66
SHOX2-201ENST00000389589 HJURPQ8NCD3 748 aaPredicted RBP25.44■■□□□ 1.66
SHOX2-201ENST00000389589 SLC22A12Q96S37 553 aa25.44■■□□□ 1.66
SHOX2-201ENST00000389589 SLC12A4Q9UP95 1085 aa25.44■■□□□ 1.66
SHOX2-201ENST00000389589 ANKRD6Q9Y2G4 727 aa25.44■■□□□ 1.66
SHOX2-201ENST00000389589 MROH6A6NGR9 719 aa25.44■■□□□ 1.66
SHOX2-201ENST00000389589 PROCP04070 461 aa25.44■■□□□ 1.66
SHOX2-201ENST00000389589 GABRR2P28476 465 aa25.44■■□□□ 1.66
SHOX2-201ENST00000389589 GRM3Q14832 879 aa25.44■■□□□ 1.66
SHOX2-201ENST00000389589 GALNTL6Q49A17 601 aa25.44■■□□□ 1.66
SHOX2-201ENST00000389589 RNF219Q5W0B1 726 aaPredicted RBP25.44■■□□□ 1.66
SHOX2-201ENST00000389589 CXorf57Q6NSI4 855 aaKnown RBP25.44■■□□□ 1.66
SHOX2-201ENST00000389589 C16orf46Q6P387 395 aa25.44■■□□□ 1.66
SHOX2-201ENST00000389589 FITM2Q8N6M3 262 aa25.44■■□□□ 1.66
SHOX2-201ENST00000389589 C2CD4AQ8NCU7 369 aaPredicted RBP25.44■■□□□ 1.66
SHOX2-201ENST00000389589 CPQQ9Y646 472 aa25.44■■□□□ 1.66
SHOX2-201ENST00000389589 BST1Q10588 318 aa25.43■■□□□ 1.66
SHOX2-201ENST00000389589 FASTKD1Q53R41 847 aaKnown RBP25.43■■□□□ 1.66
SHOX2-201ENST00000389589 NEPROQ6NW34 567 aa25.43■■□□□ 1.66
SHOX2-201ENST00000389589 Q6ZNB5 142 aa25.43■■□□□ 1.66
SHOX2-201ENST00000389589 CLEC14AQ86T13 490 aa25.43■■□□□ 1.66
SHOX2-201ENST00000389589 LCA5Q86VQ0 697 aa25.43■■□□□ 1.66
SHOX2-201ENST00000389589 ELMOD1Q8N336 334 aa25.43■■□□□ 1.66
SHOX2-201ENST00000389589 ADAMTS19Q8TE59 1207 aa25.43■■□□□ 1.66
SHOX2-201ENST00000389589 MUC3BQ9H195 1237 aa25.43■■□□□ 1.66
SHOX2-201ENST00000389589 LSM7Q9UK45 103 aaKnown RBP25.43■■□□□ 1.66
SHOX2-201ENST00000389589 SLC39A10Q9ULF5 831 aa25.43■■□□□ 1.66
SHOX2-201ENST00000389589 UBOX5O94941 541 aa25.43■■□□□ 1.66
SHOX2-201ENST00000389589 GSRP00390 522 aa25.43■■□□□ 1.66
SHOX2-201ENST00000389589 C2P06681 752 aa25.43■■□□□ 1.66
SHOX2-201ENST00000389589 LBX1P52954 281 aa25.43■■□□□ 1.66
SHOX2-201ENST00000389589 OVGP1Q12889 678 aa25.43■■□□□ 1.66
SHOX2-201ENST00000389589 PEX13Q92968 403 aa25.43■■□□□ 1.66
SHOX2-201ENST00000389589 EMILIN2Q9BXX0 1053 aa25.43■■□□□ 1.66
SHOX2-201ENST00000389589 TMEM216Q9P0N5 145 aa25.43■■□□□ 1.66
SHOX2-201ENST00000389589 GREM1O60565 184 aa25.42■■□□□ 1.66
SHOX2-201ENST00000389589 TBL1XO60907 577 aa25.42■■□□□ 1.66
SHOX2-201ENST00000389589 C1RP00736 705 aa25.42■■□□□ 1.66
SHOX2-201ENST00000389589 DNAJB1P25685 340 aa25.42■■□□□ 1.66
SHOX2-201ENST00000389589 GABRB3P28472 473 aa25.42■■□□□ 1.66
SHOX2-201ENST00000389589 SLC1A2P43004 574 aa25.42■■□□□ 1.66
SHOX2-201ENST00000389589 ABCG1P45844 678 aa25.42■■□□□ 1.66
SHOX2-201ENST00000389589 CSRP3P50461 194 aa25.42■■□□□ 1.66
SHOX2-201ENST00000389589 CTBP1Q13363 440 aa25.42■■□□□ 1.66
SHOX2-201ENST00000389589 DENND6AQ8IWF6 608 aa25.42■■□□□ 1.66
SHOX2-201ENST00000389589 FAM217AQ8IXS0 508 aa25.42■■□□□ 1.66
SHOX2-201ENST00000389589 CAB39LQ9H9S4 337 aa25.42■■□□□ 1.66
SHOX2-201ENST00000389589 GGT7Q9UJ14 662 aa25.42■■□□□ 1.66
SHOX2-201ENST00000389589 TLK1Q9UKI8 766 aa25.42■■□□□ 1.66
SHOX2-201ENST00000389589 ZNF510Q9Y2H8 683 aa25.42■■□□□ 1.66
SHOX2-201ENST00000389589 H0Y626 953 aa25.41■■□□□ 1.66
SHOX2-201ENST00000389589 CBX4O00257 560 aa25.41■■□□□ 1.66
SHOX2-201ENST00000389589 SLC7A4O43246 635 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms