RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 ATCAYQ86WG3 371 aa9.8□□□□□ -0.84
IFT88-203ENST00000389373 DENND6BQ8NEG7 585 aa9.8□□□□□ -0.84
IFT88-203ENST00000389373 OR6C4Q8NGE1 309 aa9.8□□□□□ -0.84
IFT88-203ENST00000389373 OR6K2Q8NGY2 324 aa9.8□□□□□ -0.84
IFT88-203ENST00000389373 NKD1Q969G9 470 aa9.8□□□□□ -0.84
IFT88-203ENST00000389373 TMEM159Q96B96 161 aa9.8□□□□□ -0.84
IFT88-203ENST00000389373 TBATAQ96M53 351 aa9.8□□□□□ -0.84
IFT88-203ENST00000389373 EDEM3Q9BZQ6 932 aa9.8□□□□□ -0.84
IFT88-203ENST00000389373 TM6SF2Q9BZW4 377 aa9.8□□□□□ -0.84
IFT88-203ENST00000389373 SEMA6CQ9H3T2 930 aa9.8□□□□□ -0.84
IFT88-203ENST00000389373 MBNL1Q9NR56 388 aaKnown RBP9.8□□□□□ -0.84
IFT88-203ENST00000389373 FCF1Q9Y324 198 aaKnown RBP9.8□□□□□ -0.84
IFT88-203ENST00000389373 DAAM1Q9Y4D1 1078 aa9.8□□□□□ -0.84
IFT88-203ENST00000389373 TRPM6Q9BX84 2022 aa9.79□□□□□ -0.84
IFT88-203ENST00000389373 TM7SF2O76062 418 aa9.79□□□□□ -0.84
IFT88-203ENST00000389373 AGFG2O95081 481 aa9.79□□□□□ -0.84
IFT88-203ENST00000389373 RASGRP1O95267 797 aa9.79□□□□□ -0.84
IFT88-203ENST00000389373 CCL4P13236 92 aa9.79□□□□□ -0.84
IFT88-203ENST00000389373 KRT5P13647 590 aa9.79□□□□□ -0.84
IFT88-203ENST00000389373 LIFP15018 202 aa9.79□□□□□ -0.84
IFT88-203ENST00000389373 PFKFB1P16118 471 aa9.79□□□□□ -0.84
IFT88-203ENST00000389373 HK3P52790 923 aa9.79□□□□□ -0.84
IFT88-203ENST00000389373 EIF4EBP2Q13542 120 aaPredicted RBP9.79□□□□□ -0.84
IFT88-203ENST00000389373 C16orf72Q14CZ0 275 aa9.79□□□□□ -0.84
IFT88-203ENST00000389373 KLHL40Q2TBA0 621 aa9.79□□□□□ -0.84
IFT88-203ENST00000389373 AMZ1Q400G9 498 aa9.79□□□□□ -0.84
IFT88-203ENST00000389373 MAP9Q49MG5 647 aa9.79□□□□□ -0.84
IFT88-203ENST00000389373 ZCWPW2Q504Y3 356 aa9.79□□□□□ -0.84
IFT88-203ENST00000389373 LVRNQ6Q4G3 990 aa9.79□□□□□ -0.84
IFT88-203ENST00000389373 TMPRSS9Q7Z410 1059 aa9.79□□□□□ -0.84
IFT88-203ENST00000389373 ZSCAN30Q86W11 494 aa9.79□□□□□ -0.84
IFT88-203ENST00000389373 SMYD4Q8IYR2 804 aaPredicted RBP9.79□□□□□ -0.84
IFT88-203ENST00000389373 PCDH20Q8N6Y1 951 aaKnown RBP9.79□□□□□ -0.84
IFT88-203ENST00000389373 DCAF4L2Q8NA75 395 aa9.79□□□□□ -0.84
IFT88-203ENST00000389373 CXorf40AQ8TE69 158 aa9.79□□□□□ -0.84
IFT88-203ENST00000389373 ASB12Q8WXK4 309 aa9.79□□□□□ -0.84
IFT88-203ENST00000389373 CENPTQ96BT3 561 aa9.79□□□□□ -0.84
IFT88-203ENST00000389373 SLC4A5Q9BY07 1137 aa9.79□□□□□ -0.84
IFT88-203ENST00000389373 TMPRSS4Q9NRS4 437 aa9.79□□□□□ -0.84
IFT88-203ENST00000389373 MPP6Q9NZW5 540 aa9.79□□□□□ -0.84
IFT88-203ENST00000389373 LRIT1Q9P2V4 623 aa9.79□□□□□ -0.84
IFT88-203ENST00000389373 HECAQ9UBI9 543 aaPredicted RBP9.79□□□□□ -0.84
IFT88-203ENST00000389373 TUBD1Q9UJT1 453 aa9.79□□□□□ -0.84
IFT88-203ENST00000389373 ACTL7AQ9Y615 435 aa9.79□□□□□ -0.84
IFT88-203ENST00000389373 BOD1L1Q8NFC6 3051 aa9.78□□□□□ -0.84
IFT88-203ENST00000389373 ZNF891A8MT65 544 aaPredicted RBP9.78□□□□□ -0.84
IFT88-203ENST00000389373 KRIT1O00522 736 aa9.78□□□□□ -0.84
IFT88-203ENST00000389373 NKX2-8O15522 239 aa9.78□□□□□ -0.84
IFT88-203ENST00000389373 ZNF821O75541 412 aaPredicted RBP9.78□□□□□ -0.84
IFT88-203ENST00000389373 LETM1O95202 739 aaPredicted RBP9.78□□□□□ -0.84
IFT88-203ENST00000389373 TNFP01375 233 aa9.78□□□□□ -0.84
IFT88-203ENST00000389373 MYL1P05976 194 aa9.78□□□□□ -0.84
IFT88-203ENST00000389373 KRT7P08729 469 aa9.78□□□□□ -0.84
IFT88-203ENST00000389373 GLB1P16278 677 aa9.78□□□□□ -0.84
IFT88-203ENST00000389373 ITIH2P19823 946 aa9.78□□□□□ -0.84
IFT88-203ENST00000389373 OR1E1P30953 314 aa9.78□□□□□ -0.84
IFT88-203ENST00000389373 RPL34P49207 117 aaKnown RBP9.78□□□□□ -0.84
IFT88-203ENST00000389373 MLLT10P55197 1068 aa9.78□□□□□ -0.84
IFT88-203ENST00000389373 MCCD1P59942 119 aaPredicted RBP9.78□□□□□ -0.84
IFT88-203ENST00000389373 SRP54P61011 504 aaKnown RBP9.78□□□□□ -0.84
IFT88-203ENST00000389373 ALG11Q2TAA5 492 aa9.78□□□□□ -0.84
IFT88-203ENST00000389373 RETSATQ6NUM9 610 aa9.78□□□□□ -0.84
IFT88-203ENST00000389373 LRRC31Q6UY01 552 aa9.78□□□□□ -0.84
IFT88-203ENST00000389373 NYAP1Q6ZVC0 841 aa9.78□□□□□ -0.84
IFT88-203ENST00000389373 TAF8Q7Z7C8 310 aa9.78□□□□□ -0.84
IFT88-203ENST00000389373 TTC7BQ86TV6 843 aa9.78□□□□□ -0.84
IFT88-203ENST00000389373 ARHGEF19Q8IW93 802 aa9.78□□□□□ -0.84
IFT88-203ENST00000389373 SFTPA2Q8IWL1 248 aa9.78□□□□□ -0.84
IFT88-203ENST00000389373 CACNA2D3Q8IZS8 1091 aa9.78□□□□□ -0.84
IFT88-203ENST00000389373 RCBTB1Q8NDN9 531 aa9.78□□□□□ -0.84
IFT88-203ENST00000389373 FAM46DQ8NEK8 389 aa9.78□□□□□ -0.84
IFT88-203ENST00000389373 RAB7BQ96AH8 199 aa9.78□□□□□ -0.84
IFT88-203ENST00000389373 MIB2Q96AX9 1013 aa9.78□□□□□ -0.84
IFT88-203ENST00000389373 ABHD17AQ96GS6 310 aa9.78□□□□□ -0.84
IFT88-203ENST00000389373 INTS4Q96HW7 963 aaKnown RBP9.78□□□□□ -0.84
IFT88-203ENST00000389373 KLHL32Q96NJ5 620 aa9.78□□□□□ -0.84
IFT88-203ENST00000389373 CATSPER2Q96P56 530 aa9.78□□□□□ -0.84
IFT88-203ENST00000389373 EPAS1Q99814 870 aa9.78□□□□□ -0.84
IFT88-203ENST00000389373 TSG101Q99816 390 aa9.78□□□□□ -0.84
IFT88-203ENST00000389373 WRAP53Q9BUR4 548 aaKnown RBP9.78□□□□□ -0.84
IFT88-203ENST00000389373 C1QTNF7Q9BXJ2 289 aa9.78□□□□□ -0.84
IFT88-203ENST00000389373 RDH14Q9HBH5 336 aa9.78□□□□□ -0.84
IFT88-203ENST00000389373 ATP13A1Q9HD20 1204 aa9.78□□□□□ -0.84
IFT88-203ENST00000389373 IGSF5Q9NSI5 407 aa9.78□□□□□ -0.84
IFT88-203ENST00000389373 ARMCX3Q9UH62 379 aaPredicted RBP9.78□□□□□ -0.84
IFT88-203ENST00000389373 USP25Q9UHP3 1055 aa9.78□□□□□ -0.84
IFT88-203ENST00000389373 COQ6Q9Y2Z9 468 aa9.78□□□□□ -0.84
IFT88-203ENST00000389373 A1L4Q6 167 aa9.77□□□□□ -0.85
IFT88-203ENST00000389373 B4DGG1 531 aa9.77□□□□□ -0.85
IFT88-203ENST00000389373 THAP12O43422 761 aa9.77□□□□□ -0.85
IFT88-203ENST00000389373 MED7O43513 233 aa9.77□□□□□ -0.85
IFT88-203ENST00000389373 DUX1O43812 170 aa9.77□□□□□ -0.85
IFT88-203ENST00000389373 SRGAP2O75044 1071 aa9.77□□□□□ -0.85
IFT88-203ENST00000389373 UGT2B4P06133 528 aa9.77□□□□□ -0.85
IFT88-203ENST00000389373 NR1D1P20393 614 aa9.77□□□□□ -0.85
IFT88-203ENST00000389373 HTR1BP28222 390 aa9.77□□□□□ -0.85
IFT88-203ENST00000389373 ALDH4A1P30038 563 aa9.77□□□□□ -0.85
IFT88-203ENST00000389373 UGT1A3P35503 534 aa9.77□□□□□ -0.85
IFT88-203ENST00000389373 SYKP43405 635 aa9.77□□□□□ -0.85
IFT88-203ENST00000389373 FMO5P49326 533 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms