RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 RERGLQ9H628 205 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 TUT1Q9H6E5 874 aaKnown RBP13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 TLE6Q9H808 572 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 A0A0J9YYE9 177 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 ZSCAN9O15535 394 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 LINC00032P0C843 101 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 SLC2A4P14672 509 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 GCAP28676 217 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 MPP1Q00013 466 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 MAP3K10Q02779 954 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 ITGA7Q13683 1181 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 CCNIQ14094 377 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 CMPK2Q5EBM0 449 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 TNFAIP8L3Q5GJ75 292 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 NANOGNBQ7Z5D8 188 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 ZNF410Q86VK4 478 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 CAPSLQ8WWF8 208 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 ACOX2Q99424 681 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 RIBC2Q9H4K1 309 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 NEMP2A6NFY4 417 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 PDLIM1O00151 329 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 FBXO21O94952 628 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 GPD2P43304 727 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 CARTPTQ16568 116 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 MARC1Q5VT66 337 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 TIGD7Q6NT04 549 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 HASPINQ8TF76 798 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 PRKD2Q9BZL6 878 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 ARHGEF4Q9NR80 690 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 ABCB10Q9NRK6 738 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 CIDEBQ9UHD4 219 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 EIF3LQ9Y262 564 aaKnown RBP13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 SLIT2O94813 1529 aa13.26□□□□□ -0.29
TRAPPC9-201ENST00000389328 PRKCHP24723 683 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 OLIG2Q13516 323 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 HSDL1Q3SXM5 330 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 SPOUT1Q5T280 376 aaKnown RBP13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 OTOP3Q7RTS5 596 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 CAND1Q86VP6 1230 aaKnown RBP13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 TAGAPQ8N103 731 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 METTL6Q8TCB7 284 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 FAM120BQ96EK7 910 aaKnown RBP13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 SYTL2Q9HCH5 934 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 TMEM233B4DJY2 109 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 GPR25O00155 361 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 PEX10O60683 326 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 RECQL4O94761 1208 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 SLC25A27O95847 323 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 ALOX12P18054 663 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 DGUOKQ16854 277 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 ZYG11AQ6WRX3 759 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 SYTL1Q8IYJ3 562 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 HPS1Q92902 700 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 MCRS1Q96EZ8 462 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 SLC39A3Q9BRY0 314 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 RMI1Q9H9A7 625 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 VPS45Q9NRW7 570 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 COQ6Q9Y2Z9 468 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 NUP188Q5SRE5 1749 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 IQCA1LA6NCM1 817 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 MDM4O15151 490 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 STX7O15400 261 aaKnown RBP13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 ASNA1O43681 348 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 VPS26AO75436 327 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 OAZ1P54368 228 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 PCLAFQ15004 111 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 REP15Q6BDI9 236 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 ERI1Q8IV48 349 aaKnown RBP13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 TMEM192Q8IY95 271 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 CRYGNQ8WXF5 182 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 SIGLEC10Q96LC7 697 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 HSFY1Q96LI6 401 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 ADI1Q9BV57 179 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 REXO4Q9GZR2 422 aaKnown RBP13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 ARMC7Q9H6L4 198 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 TBC1D13Q9NVG8 400 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 ABI2Q9NYB9 513 aaPredicted RBP13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 E7ESA3 106 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 FGF3P11487 239 aaPredicted RBP13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 MAGP20916 626 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 TIGD2Q4W5G0 525 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 GJC2Q5T442 439 aaPredicted RBP13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 PAOXQ6QHF9 649 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 EID3Q8N140 333 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 OR8H2Q8N162 312 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 PSMA8Q8TAA3 256 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 CLEC4CQ8WTT0 213 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 VPS33AQ96AX1 596 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 PEBP4Q96S96 227 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 EURLQ9NYK6 297 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 TMA7Q9Y2S6 64 aaKnown RBP13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 RAD54BQ9Y620 910 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 MYH11P35749 1972 aa13.25□□□□□ -0.29
TRAPPC9-201ENST00000389328 FAM20BO75063 409 aa13.24□□□□□ -0.29
TRAPPC9-201ENST00000389328 ZBTB7AO95365 584 aa13.24□□□□□ -0.29
TRAPPC9-201ENST00000389328 GSNP06396 782 aa13.24□□□□□ -0.29
TRAPPC9-201ENST00000389328 ARF4P18085 180 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC9-201ENST00000389328 NMBRP28336 390 aa13.24□□□□□ -0.29
TRAPPC9-201ENST00000389328 CCR10P46092 362 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms