RNA–Protein interactions for RNA: ENST00000381018.7

TRIM23-203, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-203ENST00000381018 SPATS2LQ9NUQ6 558 aaKnown RBP12.06□□□□□ -0.48
TRIM23-203ENST00000381018 RBM22Q9NW64 420 aaKnown RBP eCLIP12.06□□□□□ -0.48
TRIM23-203ENST00000381018 NCKIPSDQ9NZQ3 722 aa12.06□□□□□ -0.48
TRIM23-203ENST00000381018 SLC2A6Q9UGQ3 507 aa12.06□□□□□ -0.48
TRIM23-203ENST00000381018 SFMBT1Q9UHJ3 866 aa12.06□□□□□ -0.48
TRIM23-203ENST00000381018 VPS28Q9UK41 221 aa12.06□□□□□ -0.48
TRIM23-203ENST00000381018 G3BP2Q9UN86 482 aaKnown RBP12.06□□□□□ -0.48
TRIM23-203ENST00000381018 PLXNA3P51805 1871 aa12.05□□□□□ -0.48
TRIM23-203ENST00000381018 TRPC5OSA6NMA1 111 aa12.05□□□□□ -0.48
TRIM23-203ENST00000381018 MAP3K13O43283 966 aa12.05□□□□□ -0.48
TRIM23-203ENST00000381018 AHCYL1O43865 530 aa12.05□□□□□ -0.48
TRIM23-203ENST00000381018 PEX1O43933 1283 aa12.05□□□□□ -0.48
TRIM23-203ENST00000381018 ZNF623O75123 536 aa12.05□□□□□ -0.48
TRIM23-203ENST00000381018 DUSP11O75319 330 aaKnown RBP12.05□□□□□ -0.48
TRIM23-203ENST00000381018 CELF2O95319 508 aaKnown RBP12.05□□□□□ -0.48
TRIM23-203ENST00000381018 FESP07332 822 aa12.05□□□□□ -0.48
TRIM23-203ENST00000381018 ZCCHC18P0CG32 403 aa12.05□□□□□ -0.48
TRIM23-203ENST00000381018 UQCRBP14927 111 aa12.05□□□□□ -0.48
TRIM23-203ENST00000381018 PAX3P23760 479 aa12.05□□□□□ -0.48
TRIM23-203ENST00000381018 SLC5A3P53794 718 aa12.05□□□□□ -0.48
TRIM23-203ENST00000381018 TAS2R39P59534 338 aa12.05□□□□□ -0.48
TRIM23-203ENST00000381018 RPL26P61254 145 aaKnown RBP12.05□□□□□ -0.48
TRIM23-203ENST00000381018 MGAT3Q09327 533 aa12.05□□□□□ -0.48
TRIM23-203ENST00000381018 DLG1Q12959 904 aa12.05□□□□□ -0.48
TRIM23-203ENST00000381018 MED21Q13503 144 aa12.05□□□□□ -0.48
TRIM23-203ENST00000381018 CNGA3Q16281 694 aa12.05□□□□□ -0.48
TRIM23-203ENST00000381018 GNASQ5JWF2 1037 aa12.05□□□□□ -0.48
TRIM23-203ENST00000381018 TSTD2Q5T7W7 516 aa12.05□□□□□ -0.48
TRIM23-203ENST00000381018 ARMC3Q5W041 872 aa12.05□□□□□ -0.48
TRIM23-203ENST00000381018 AFMIDQ63HM1 303 aa12.05□□□□□ -0.48
TRIM23-203ENST00000381018 SDCCAG8Q86SQ7 713 aaPredicted RBP12.05□□□□□ -0.48
TRIM23-203ENST00000381018 SERINC5Q86VE9 423 aa12.05□□□□□ -0.48
TRIM23-203ENST00000381018 RTL3Q8N8U3 475 aaKnown RBP12.05□□□□□ -0.48
TRIM23-203ENST00000381018 PHC3Q8NDX5 983 aa12.05□□□□□ -0.48
TRIM23-203ENST00000381018 RSPH1Q8WYR4 309 aa12.05□□□□□ -0.48
TRIM23-203ENST00000381018 CASP10Q92851 521 aa12.05□□□□□ -0.48
TRIM23-203ENST00000381018 RCN3Q96D15 328 aa12.05□□□□□ -0.48
TRIM23-203ENST00000381018 MRGPRX2Q96LB1 330 aa12.05□□□□□ -0.48
TRIM23-203ENST00000381018 GBP5Q96PP8 586 aa12.05□□□□□ -0.48
TRIM23-203ENST00000381018 TUBGCP5Q96RT8 1024 aa12.05□□□□□ -0.48
TRIM23-203ENST00000381018 POMKQ9H5K3 350 aa12.05□□□□□ -0.48
TRIM23-203ENST00000381018 AGO3Q9H9G7 860 aaKnown RBP12.05□□□□□ -0.48
TRIM23-203ENST00000381018 ZBTB26Q9HCK0 441 aa12.05□□□□□ -0.48
TRIM23-203ENST00000381018 NDFIP2Q9NV92 336 aa12.05□□□□□ -0.48
TRIM23-203ENST00000381018 CLIC5Q9NZA1 410 aa12.05□□□□□ -0.48
TRIM23-203ENST00000381018 C6orf203Q9P0P8 240 aaPredicted RBP12.05□□□□□ -0.48
TRIM23-203ENST00000381018 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.05□□□□□ -0.48
TRIM23-203ENST00000381018 BCAP29Q9UHQ4 241 aa12.05□□□□□ -0.48
TRIM23-203ENST00000381018 FBXO5Q9UKT4 447 aa12.05□□□□□ -0.48
TRIM23-203ENST00000381018 ARHGEF37A1IGU5 675 aa12.04□□□□□ -0.48
TRIM23-203ENST00000381018 ENO4A6NNW6 628 aa12.04□□□□□ -0.48
TRIM23-203ENST00000381018 E9PAM4 449 aa12.04□□□□□ -0.48
TRIM23-203ENST00000381018 RNASEH1O60930 286 aaKnown RBP12.04□□□□□ -0.48
TRIM23-203ENST00000381018 TADA2AO75478 443 aa12.04□□□□□ -0.48
TRIM23-203ENST00000381018 JUNP05412 331 aaKnown RBP12.04□□□□□ -0.48
TRIM23-203ENST00000381018 CPB1P15086 417 aa12.04□□□□□ -0.48
TRIM23-203ENST00000381018 CD1EP15812 388 aa12.04□□□□□ -0.48
TRIM23-203ENST00000381018 ATP5F1P24539 256 aaPredicted RBP12.04□□□□□ -0.48
TRIM23-203ENST00000381018 CHRNA4P43681 627 aa12.04□□□□□ -0.48
TRIM23-203ENST00000381018 PAPOLAP51003 745 aaKnown RBP12.04□□□□□ -0.48
TRIM23-203ENST00000381018 AQP4P55087 323 aa12.04□□□□□ -0.48
TRIM23-203ENST00000381018 DNAJB13P59910 316 aa12.04□□□□□ -0.48
TRIM23-203ENST00000381018 MSLNQ13421 630 aaPredicted RBP12.04□□□□□ -0.48
TRIM23-203ENST00000381018 TUSC3Q13454 348 aa12.04□□□□□ -0.48
TRIM23-203ENST00000381018 TAF1CQ15572 869 aaPredicted RBP12.04□□□□□ -0.48
TRIM23-203ENST00000381018 PIGGQ5H8A4 983 aa12.04□□□□□ -0.48
TRIM23-203ENST00000381018 ARTNQ5T4W7 220 aa12.04□□□□□ -0.48
TRIM23-203ENST00000381018 TMEM198Q66K66 360 aa12.04□□□□□ -0.48
TRIM23-203ENST00000381018 NEPROQ6NW34 567 aa12.04□□□□□ -0.48
TRIM23-203ENST00000381018 CXCL17Q6UXB2 119 aa12.04□□□□□ -0.48
TRIM23-203ENST00000381018 CD300LGQ6UXG3 332 aa12.04□□□□□ -0.48
TRIM23-203ENST00000381018 RANBP10Q6VN20 620 aa12.04□□□□□ -0.48
TRIM23-203ENST00000381018 KIAA0408Q6ZU52 694 aa12.04□□□□□ -0.48
TRIM23-203ENST00000381018 SPATA2LQ8IUW3 424 aaPredicted RBP12.04□□□□□ -0.48
TRIM23-203ENST00000381018 PGAM4Q8N0Y7 254 aa12.04□□□□□ -0.48
TRIM23-203ENST00000381018 SPATA6LQ8N4H0 392 aa12.04□□□□□ -0.48
TRIM23-203ENST00000381018 KDM1BQ8NB78 822 aa12.04□□□□□ -0.48
TRIM23-203ENST00000381018 TXNDC5Q8NBS9 432 aaKnown RBP12.04□□□□□ -0.48
TRIM23-203ENST00000381018 GABPB2Q8TAK5 448 aaPredicted RBP12.04□□□□□ -0.48
TRIM23-203ENST00000381018 SOCS4Q8WXH5 440 aa12.04□□□□□ -0.48
TRIM23-203ENST00000381018 UROC1Q96N76 676 aa12.04□□□□□ -0.48
TRIM23-203ENST00000381018 CDRT15Q96T59 188 aa12.04□□□□□ -0.48
TRIM23-203ENST00000381018 OMDQ99983 421 aa12.04□□□□□ -0.48
TRIM23-203ENST00000381018 ATXN3LQ9H3M9 355 aa12.04□□□□□ -0.48
TRIM23-203ENST00000381018 PSMD13Q9UNM6 376 aa12.04□□□□□ -0.48
TRIM23-203ENST00000381018 HEATR9A2RTY3 570 aa12.04□□□□□ -0.48
TRIM23-203ENST00000381018 MOCS2O96007 188 aaPredicted RBP12.04□□□□□ -0.48
TRIM23-203ENST00000381018 IGHA2P01877 340 aa12.04□□□□□ -0.48
TRIM23-203ENST00000381018 RPLP2P05387 115 aaKnown RBP12.04□□□□□ -0.48
TRIM23-203ENST00000381018 YY1P25490 414 aa12.04□□□□□ -0.48
TRIM23-203ENST00000381018 CD52P31358 61 aa12.04□□□□□ -0.48
TRIM23-203ENST00000381018 GRIK1P39086 918 aa12.04□□□□□ -0.48
TRIM23-203ENST00000381018 THOP1P52888 689 aa12.04□□□□□ -0.48
TRIM23-203ENST00000381018 SATB1Q01826 763 aa12.04□□□□□ -0.48
TRIM23-203ENST00000381018 NRG1Q02297 640 aaPredicted RBP12.04□□□□□ -0.48
TRIM23-203ENST00000381018 ART3Q13508 389 aa12.04□□□□□ -0.48
TRIM23-203ENST00000381018 FLOT2Q14254 428 aa12.04□□□□□ -0.48
TRIM23-203ENST00000381018 RFTN1Q14699 578 aaPredicted RBP12.04□□□□□ -0.48
TRIM23-203ENST00000381018 GRAMD1BQ3KR37 738 aa12.04□□□□□ -0.48
TRIM23-203ENST00000381018 SH2D4BQ5SQS7 431 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms