RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 GRIA1P42261 906 aa4.99□□□□□ -1.61
PCDH9-201ENST00000377861 TUBP50607 506 aa4.99□□□□□ -1.61
PCDH9-201ENST00000377861 LAPTM5Q13571 262 aa4.99□□□□□ -1.61
PCDH9-201ENST00000377861 TAZQ16635 292 aa4.99□□□□□ -1.61
PCDH9-201ENST00000377861 C6orf10Q5SRN2 563 aa4.99□□□□□ -1.61
PCDH9-201ENST00000377861 GPC2Q8N158 579 aa4.99□□□□□ -1.61
PCDH9-201ENST00000377861 CERS2Q96G23 380 aa4.99□□□□□ -1.61
PCDH9-201ENST00000377861 BTN2A3PQ96KV6 586 aa4.99□□□□□ -1.61
PCDH9-201ENST00000377861 SPACA6W5XKT8 324 aa4.99□□□□□ -1.61
PCDH9-201ENST00000377861 ATP9AO75110 1047 aa4.99□□□□□ -1.61
PCDH9-201ENST00000377861 PLEKHG4BQ96PX9 1271 aa4.99□□□□□ -1.61
PCDH9-201ENST00000377861 TMEM120AQ9BXJ8 343 aa4.99□□□□□ -1.61
PCDH9-201ENST00000377861 SLC25A51Q9H1U9 297 aa4.99□□□□□ -1.61
PCDH9-201ENST00000377861 MOCS1Q9NZB8 636 aa4.99□□□□□ -1.61
PCDH9-201ENST00000377861 BCAS2O75934 225 aaPredicted RBP4.99□□□□□ -1.61
PCDH9-201ENST00000377861 PRMT2P55345 433 aa4.99□□□□□ -1.61
PCDH9-201ENST00000377861 SCAPQ12770 1279 aa4.99□□□□□ -1.61
PCDH9-201ENST00000377861 CNTN1Q12860 1018 aa4.99□□□□□ -1.61
PCDH9-201ENST00000377861 DSTYKQ6XUX3 929 aa4.99□□□□□ -1.61
PCDH9-201ENST00000377861 DNAJB3Q8WWF6 145 aa4.99□□□□□ -1.61
PCDH9-201ENST00000377861 SOCS4Q8WXH5 440 aa4.99□□□□□ -1.61
PCDH9-201ENST00000377861 ING3Q9NXR8 418 aa4.99□□□□□ -1.61
PCDH9-201ENST00000377861 TEKQ02763 1124 aa4.99□□□□□ -1.61
PCDH9-201ENST00000377861 ZSWIM2Q8NEG5 633 aa4.99□□□□□ -1.61
PCDH9-201ENST00000377861 RUVBL2Q9Y230 463 aaKnown RBP4.99□□□□□ -1.61
PCDH9-201ENST00000377861 ELK3P41970 407 aa4.99□□□□□ -1.61
PCDH9-201ENST00000377861 EIF5AP63241 154 aaKnown RBP4.99□□□□□ -1.61
PCDH9-201ENST00000377861 FMO1Q01740 532 aa4.99□□□□□ -1.61
PCDH9-201ENST00000377861 ZDHHC14Q8IZN3 488 aa4.99□□□□□ -1.61
PCDH9-201ENST00000377861 TMEM132CQ8N3T6 1108 aa4.99□□□□□ -1.61
PCDH9-201ENST00000377861 ERGIC3Q9Y282 383 aa4.99□□□□□ -1.61
PCDH9-201ENST00000377861 LYNP07948 512 aa4.99□□□□□ -1.61
PCDH9-201ENST00000377861 JAK1P23458 1154 aa4.99□□□□□ -1.61
PCDH9-201ENST00000377861 EPHB2P29323 1055 aa4.99□□□□□ -1.61
PCDH9-201ENST00000377861 USP46P62068 366 aa4.99□□□□□ -1.61
PCDH9-201ENST00000377861 AGAP11Q8TF27 550 aa4.99□□□□□ -1.61
PCDH9-201ENST00000377861 RUSC1Q9BVN2 902 aa4.99□□□□□ -1.61
PCDH9-201ENST00000377861 SPHKAPQ2M3C7 1700 aa4.99□□□□□ -1.61
PCDH9-201ENST00000377861 PDZK1P1A8MUH7 402 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 IMPDH1P20839 514 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 IL17AQ16552 155 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 ARRDC4Q8NCT1 418 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 ACE2Q9BYF1 805 aaPredicted RBP4.98□□□□□ -1.61
PCDH9-201ENST00000377861 CALML5Q9NZT1 146 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 H3BRB1 525 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 AP2A1O95782 977 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 SESN2P58004 480 aaPredicted RBP4.98□□□□□ -1.61
PCDH9-201ENST00000377861 EIF4HQ15056 248 aaKnown RBP4.98□□□□□ -1.61
PCDH9-201ENST00000377861 BRSK1Q8TDC3 778 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 ABTB1Q969K4 478 aaPredicted RBP4.98□□□□□ -1.61
PCDH9-201ENST00000377861 TUT1Q9H6E5 874 aaKnown RBP4.98□□□□□ -1.61
PCDH9-201ENST00000377861 IQGAP1P46940 1657 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 TRUB2O95900 331 aaKnown RBP4.98□□□□□ -1.61
PCDH9-201ENST00000377861 APBA3O96018 575 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 DHRS4L1P0CG22 281 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 ZNF235Q14590 738 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 KLHL22Q53GT1 634 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 MFSD7Q6UXD7 560 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 MFSD2AQ8NA29 543 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 OR2T34Q8NGX1 318 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 OR2T3Q8NH03 318 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 MDM1Q8TC05 714 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 OVCA2Q8WZ82 227 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 TRAF4Q9BUZ4 470 aaPredicted RBP4.98□□□□□ -1.61
PCDH9-201ENST00000377861 FHDC1Q9C0D6 1143 aaPredicted RBP4.98□□□□□ -1.61
PCDH9-201ENST00000377861 UNC45AQ9H3U1 944 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 ZNF696Q9H7X3 374 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 DUXAA6NLW8 204 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 HOXA13P31271 388 aaPredicted RBP4.98□□□□□ -1.61
PCDH9-201ENST00000377861 IL12RB1P42701 662 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 PSMD8P48556 350 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 ZNF280AP59817 542 aaPredicted RBP4.98□□□□□ -1.61
PCDH9-201ENST00000377861 OXR1Q8N573 874 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 GDPD5Q8WTR4 605 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 ALG3Q92685 438 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 DHRS4Q9BTZ2 278 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 BEGAINQ9BUH8 593 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 NEUROG2Q9H2A3 272 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 CRISPLD1Q9H336 500 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 CXorf21Q9HAI6 301 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 UGDHO60701 494 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 OASLQ15646 514 aaKnown RBP4.98□□□□□ -1.61
PCDH9-201ENST00000377861 SH3D19Q5HYK7 790 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 EIF5AL1Q6IS14 154 aaKnown RBP4.98□□□□□ -1.61
PCDH9-201ENST00000377861 ZYG11AQ6WRX3 759 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 SMARCD1Q96GM5 515 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 ITCHQ96J02 903 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 MIPP30301 263 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 SYNE4Q8N205 404 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 ARNT2Q9HBZ2 717 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 DHRS12A0PJE2 317 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 PIPSLA2A3N6 862 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 PITPNAQ00169 270 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 KCNT2Q6UVM3 1135 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 TEX264Q9Y6I9 313 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 ADAMDEC1O15204 470 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 ASNA1O43681 348 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 ITGA2BP08514 1039 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 ZNF423Q2M1K9 1284 aa4.98□□□□□ -1.61
PCDH9-201ENST00000377861 LRIG1Q96JA1 1093 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms