RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 INSM1Q01101 510 aaPredicted RBP21.35■■□□□ 1.01
VSX1-201ENST00000376707 SEMG2Q02383 582 aa21.35■■□□□ 1.01
VSX1-201ENST00000376707 RAD51Q06609 339 aa21.35■■□□□ 1.01
VSX1-201ENST00000376707 DCUN1D2Q6PH85 259 aa21.35■■□□□ 1.01
VSX1-201ENST00000376707 GDPD4Q6W3E5 623 aa21.35■■□□□ 1.01
VSX1-201ENST00000376707 IRF2BP2Q7Z5L9 587 aa21.35■■□□□ 1.01
VSX1-201ENST00000376707 CASKIN2Q8WXE0 1202 aa21.35■■□□□ 1.01
VSX1-201ENST00000376707 RFFLQ8WZ73 363 aa21.35■■□□□ 1.01
VSX1-201ENST00000376707 DCBLD2Q96PD2 775 aa21.35■■□□□ 1.01
VSX1-201ENST00000376707 LENG8Q96PV6 779 aaPredicted RBP21.35■■□□□ 1.01
VSX1-201ENST00000376707 EPAS1Q99814 870 aa21.35■■□□□ 1.01
VSX1-201ENST00000376707 CNPY3Q9BT09 278 aa21.35■■□□□ 1.01
VSX1-201ENST00000376707 SYT11Q9BT88 431 aa21.35■■□□□ 1.01
VSX1-201ENST00000376707 NRSN2Q9GZP1 204 aa21.35■■□□□ 1.01
VSX1-201ENST00000376707 CAAP1Q9H8G2 361 aa21.35■■□□□ 1.01
VSX1-201ENST00000376707 GPR27Q9NS67 375 aa21.35■■□□□ 1.01
VSX1-201ENST00000376707 NLGN3Q9NZ94 848 aa21.35■■□□□ 1.01
VSX1-201ENST00000376707 GGT7Q9UJ14 662 aa21.35■■□□□ 1.01
VSX1-201ENST00000376707 ACACAQ13085 2346 aa21.35■■□□□ 1.01
VSX1-201ENST00000376707 ADAMTS20P59510 1910 aa21.35■■□□□ 1.01
VSX1-201ENST00000376707 LAMA5O15230 3695 aa21.34■■□□□ 1.01
VSX1-201ENST00000376707 A0A087WV48 116 aa21.34■■□□□ 1.01
VSX1-201ENST00000376707 SPTY2D1-AS1A0A0U1RR47 76 aa21.34■■□□□ 1.01
VSX1-201ENST00000376707 H3BM21 787 aa21.34■■□□□ 1.01
VSX1-201ENST00000376707 IGSF6O95976 241 aa21.34■■□□□ 1.01
VSX1-201ENST00000376707 AIF1P55008 147 aa21.34■■□□□ 1.01
VSX1-201ENST00000376707 YBEYP58557 167 aaPredicted RBP21.34■■□□□ 1.01
VSX1-201ENST00000376707 RHOAP61586 193 aa21.34■■□□□ 1.01
VSX1-201ENST00000376707 RPL7AP62424 266 aaKnown RBP21.34■■□□□ 1.01
VSX1-201ENST00000376707 PDE1CQ14123 709 aaPredicted RBP21.34■■□□□ 1.01
VSX1-201ENST00000376707 FZD2Q14332 565 aa21.34■■□□□ 1.01
VSX1-201ENST00000376707 CAVIN1Q6NZI2 390 aaKnown RBP21.34■■□□□ 1.01
VSX1-201ENST00000376707 TTC7BQ86TV6 843 aa21.34■■□□□ 1.01
VSX1-201ENST00000376707 PARGQ86W56 976 aa21.34■■□□□ 1.01
VSX1-201ENST00000376707 CACTIN-AS1Q8N1I8 211 aa21.34■■□□□ 1.01
VSX1-201ENST00000376707 ASB12Q8WXK4 309 aa21.34■■□□□ 1.01
VSX1-201ENST00000376707 BAP1Q92560 729 aa21.34■■□□□ 1.01
VSX1-201ENST00000376707 KLF6Q99612 283 aaPredicted RBP21.34■■□□□ 1.01
VSX1-201ENST00000376707 TTYH3Q9C0H2 523 aa21.34■■□□□ 1.01
VSX1-201ENST00000376707 NOL6Q9H6R4 1146 aaKnown RBP21.34■■□□□ 1.01
VSX1-201ENST00000376707 CATSPERBQ9H7T0 1116 aa21.34■■□□□ 1.01
VSX1-201ENST00000376707 FZD10Q9ULW2 581 aa21.34■■□□□ 1.01
VSX1-201ENST00000376707 SCAMP1O15126 338 aa21.33■■□□□ 1.01
VSX1-201ENST00000376707 CSF2P04141 144 aa21.33■■□□□ 1.01
VSX1-201ENST00000376707 GIMD1P0DJR0 217 aa21.33■■□□□ 1.01
VSX1-201ENST00000376707 CKMT1AP12532 417 aa21.33■■□□□ 1.01
VSX1-201ENST00000376707 ZNF165P49910 485 aa21.33■■□□□ 1.01
VSX1-201ENST00000376707 RTP5Q14D33 572 aa21.33■■□□□ 1.01
VSX1-201ENST00000376707 PARP15Q460N3 678 aa21.33■■□□□ 1.01
VSX1-201ENST00000376707 INO80DQ53TQ3 878 aaPredicted RBP21.33■■□□□ 1.01
VSX1-201ENST00000376707 PPP1R15BQ5SWA1 713 aa21.33■■□□□ 1.01
VSX1-201ENST00000376707 ACAD10Q6JQN1 1059 aa21.33■■□□□ 1.01
VSX1-201ENST00000376707 MCOLN2Q8IZK6 566 aa21.33■■□□□ 1.01
VSX1-201ENST00000376707 DCBLD1Q8N8Z6 715 aa21.33■■□□□ 1.01
VSX1-201ENST00000376707 DENND6BQ8NEG7 585 aa21.33■■□□□ 1.01
VSX1-201ENST00000376707 HMCESQ96FZ2 354 aa21.33■■□□□ 1.01
VSX1-201ENST00000376707 APOLD1Q96LR9 279 aa21.33■■□□□ 1.01
VSX1-201ENST00000376707 FUCA2Q9BTY2 467 aa21.33■■□□□ 1.01
VSX1-201ENST00000376707 DUSP23Q9BVJ7 150 aa21.33■■□□□ 1.01
VSX1-201ENST00000376707 EVA1BQ9NVM1 165 aa21.33■■□□□ 1.01
VSX1-201ENST00000376707 RASA4BC9J798 803 aa21.32■■□□□ 1
VSX1-201ENST00000376707 K7ESM1 405 aa21.32■■□□□ 1
VSX1-201ENST00000376707 RASA4O43374 803 aa21.32■■□□□ 1
VSX1-201ENST00000376707 NEBLO76041 1014 aa21.32■■□□□ 1
VSX1-201ENST00000376707 MT-CO3P00414 261 aa21.32■■□□□ 1
VSX1-201ENST00000376707 NME1P15531 152 aaKnown RBP21.32■■□□□ 1
VSX1-201ENST00000376707 DUSP3P51452 185 aaPredicted RBP21.32■■□□□ 1
VSX1-201ENST00000376707 LRRC73Q5JTD7 316 aa21.32■■□□□ 1
VSX1-201ENST00000376707 KDM7AQ6ZMT4 941 aa21.32■■□□□ 1
VSX1-201ENST00000376707 ZNF548Q8NEK5 533 aaPredicted RBP21.32■■□□□ 1
VSX1-201ENST00000376707 VOPP1Q96AW1 172 aa21.32■■□□□ 1
VSX1-201ENST00000376707 KLC2Q9H0B6 622 aa21.32■■□□□ 1
VSX1-201ENST00000376707 CHD5Q8TDI0 1954 aa21.32■■□□□ 1
VSX1-201ENST00000376707 ITPR1Q14643 2758 aa21.31■■□□□ 1
VSX1-201ENST00000376707 A0A1W2PQC6 194 aa21.31■■□□□ 1
VSX1-201ENST00000376707 WASH4PA8MWX3 477 aa21.31■■□□□ 1
VSX1-201ENST00000376707 AREL1O15033 823 aa21.31■■□□□ 1
VSX1-201ENST00000376707 FGF10O15520 208 aaPredicted RBP21.31■■□□□ 1
VSX1-201ENST00000376707 SPINT1O43278 529 aa21.31■■□□□ 1
VSX1-201ENST00000376707 TNFAIP3P21580 790 aa21.31■■□□□ 1
VSX1-201ENST00000376707 ABCG1P45844 678 aa21.31■■□□□ 1
VSX1-201ENST00000376707 SERINC3Q13530 473 aa21.31■■□□□ 1
VSX1-201ENST00000376707 FILIP1LQ4L180 1135 aa21.31■■□□□ 1
VSX1-201ENST00000376707 PPP1R2P3Q6NXS1 205 aa21.31■■□□□ 1
VSX1-201ENST00000376707 UMODL1-AS1Q8N2C9 162 aa21.31■■□□□ 1
VSX1-201ENST00000376707 FAM181AQ8N9Y4 354 aa21.31■■□□□ 1
VSX1-201ENST00000376707 NETO2Q8NC67 525 aa21.31■■□□□ 1
VSX1-201ENST00000376707 CXorf40AQ8TE69 158 aa21.31■■□□□ 1
VSX1-201ENST00000376707 VCPIP1Q96JH7 1222 aa21.31■■□□□ 1
VSX1-201ENST00000376707 NCAPGQ9BPX3 1015 aa21.31■■□□□ 1
VSX1-201ENST00000376707 C1QTNF7Q9BXJ2 289 aa21.31■■□□□ 1
VSX1-201ENST00000376707 USP29Q9HBJ7 922 aa21.31■■□□□ 1
VSX1-201ENST00000376707 MFHAS1Q9Y4C4 1052 aa21.31■■□□□ 1
VSX1-201ENST00000376707 TRPM6Q9BX84 2022 aa21.31■■□□□ 1
VSX1-201ENST00000376707 ARID1BQ8NFD5 2236 aaPredicted RBP21.31■■□□□ 1
VSX1-201ENST00000376707 CELSR3Q9NYQ7 3312 aa21.3■■□□□ 1
VSX1-201ENST00000376707 A0A1B0GTH6 734 aa21.3■■□□□ 1
VSX1-201ENST00000376707 MMP20O60882 483 aa21.3■■□□□ 1
VSX1-201ENST00000376707 MYF5P13349 255 aa21.3■■□□□ 1
VSX1-201ENST00000376707 JUNDP17535 347 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms