RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 GEMP55040 296 aa14.71□□□□□ -0.05
MSH5-201ENST00000375703 DYNC1I2Q13409 638 aaKnown RBP14.71□□□□□ -0.05
MSH5-201ENST00000375703 TRIM67Q6ZTA4 783 aa14.71□□□□□ -0.05
MSH5-201ENST00000375703 ARHGAP12Q8IWW6 846 aa14.71□□□□□ -0.05
MSH5-201ENST00000375703 ADCY4Q8NFM4 1077 aa14.71□□□□□ -0.05
MSH5-201ENST00000375703 DQX1Q8TE96 717 aaKnown RBP14.71□□□□□ -0.05
MSH5-201ENST00000375703 BRI3BPQ8WY22 251 aa14.71□□□□□ -0.05
MSH5-201ENST00000375703 POMKQ9H5K3 350 aa14.71□□□□□ -0.05
MSH5-201ENST00000375703 CSNK1G1Q9HCP0 422 aa14.71□□□□□ -0.05
MSH5-201ENST00000375703 GTSE1Q9NYZ3 720 aa14.71□□□□□ -0.05
MSH5-201ENST00000375703 RAB26Q9ULW5 256 aa14.71□□□□□ -0.05
MSH5-201ENST00000375703 TCAF1Q9Y4C2 921 aa14.71□□□□□ -0.05
MSH5-201ENST00000375703 SHROOM3Q8TF72 1996 aa14.71□□□□□ -0.06
MSH5-201ENST00000375703 A0A087X1B8 175 aa14.71□□□□□ -0.06
MSH5-201ENST00000375703 MATN3O15232 486 aa14.71□□□□□ -0.06
MSH5-201ENST00000375703 MAFKO60675 156 aa14.71□□□□□ -0.06
MSH5-201ENST00000375703 PMPCBO75439 489 aa14.71□□□□□ -0.06
MSH5-201ENST00000375703 PGM3O95394 542 aa14.71□□□□□ -0.06
MSH5-201ENST00000375703 HNRNPLP14866 589 aaKnown RBP eCLIP14.71□□□□□ -0.068e-8■■■□□ 16.1
MSH5-201ENST00000375703 PAMP19021 973 aa14.71□□□□□ -0.06
MSH5-201ENST00000375703 TCN1P20061 433 aaPredicted RBP14.71□□□□□ -0.06
MSH5-201ENST00000375703 PCSK1P29120 753 aa14.71□□□□□ -0.06
MSH5-201ENST00000375703 CD151P48509 253 aa14.71□□□□□ -0.06
MSH5-201ENST00000375703 RFTN1Q14699 578 aaPredicted RBP14.71□□□□□ -0.06
MSH5-201ENST00000375703 OLFML2BQ68BL8 750 aa14.71□□□□□ -0.06
MSH5-201ENST00000375703 PIWIL4Q7Z3Z4 852 aaKnown RBP14.71□□□□□ -0.06
MSH5-201ENST00000375703 LILRA2Q8N149 483 aa14.71□□□□□ -0.06
MSH5-201ENST00000375703 TXNDC5Q8NBS9 432 aaKnown RBP14.71□□□□□ -0.06
MSH5-201ENST00000375703 MYLPFQ96A32 169 aa14.71□□□□□ -0.06
MSH5-201ENST00000375703 IL12RB2Q99665 862 aa14.71□□□□□ -0.06
MSH5-201ENST00000375703 SLC39A8Q9C0K1 460 aa14.71□□□□□ -0.06
MSH5-201ENST00000375703 ZNF408Q9H9D4 720 aa14.71□□□□□ -0.06
MSH5-201ENST00000375703 ENTPD7Q9NQZ7 604 aa14.71□□□□□ -0.06
MSH5-201ENST00000375703 CHST12Q9NRB3 414 aa14.71□□□□□ -0.06
MSH5-201ENST00000375703 UBAP1Q9NZ09 502 aa14.71□□□□□ -0.06
MSH5-201ENST00000375703 RIMS3Q9UJD0 308 aa14.71□□□□□ -0.06
MSH5-201ENST00000375703 FIS1Q9Y3D6 152 aa14.71□□□□□ -0.06
MSH5-201ENST00000375703 COMMD3-BMI1R4GMX3 469 aa14.71□□□□□ -0.06
MSH5-201ENST00000375703 SDHDO14521 159 aa14.7□□□□□ -0.06
MSH5-201ENST00000375703 CRTAMO95727 393 aa14.7□□□□□ -0.06
MSH5-201ENST00000375703 ETS2P15036 469 aa14.7□□□□□ -0.06
MSH5-201ENST00000375703 ATP5F1P24539 256 aaPredicted RBP14.7□□□□□ -0.06
MSH5-201ENST00000375703 CYP2C18P33260 490 aa14.7□□□□□ -0.06
MSH5-201ENST00000375703 BEX3Q00994 111 aa14.7□□□□□ -0.06
MSH5-201ENST00000375703 ZNF470Q6ECI4 717 aa14.7□□□□□ -0.06
MSH5-201ENST00000375703 C2CD4AQ8NCU7 369 aaPredicted RBP14.7□□□□□ -0.06
MSH5-201ENST00000375703 NAT14Q8WUY8 206 aa14.7□□□□□ -0.06
MSH5-201ENST00000375703 PTCD2Q8WV60 388 aaKnown RBP14.7□□□□□ -0.06
MSH5-201ENST00000375703 DLG3Q92796 817 aa14.7□□□□□ -0.06
MSH5-201ENST00000375703 ZNF419Q96HQ0 510 aaPredicted RBP14.7□□□□□ -0.06
MSH5-201ENST00000375703 MAELQ96JY0 434 aaKnown RBP14.7□□□□□ -0.06
MSH5-201ENST00000375703 PKP2Q99959 881 aa14.7□□□□□ -0.06
MSH5-201ENST00000375703 FSD1LQ9BXM9 530 aa14.7□□□□□ -0.06
MSH5-201ENST00000375703 MRPL1Q9BYD6 325 aaKnown RBP14.7□□□□□ -0.06
MSH5-201ENST00000375703 TRPV6Q9H1D0 765 aa14.7□□□□□ -0.06
MSH5-201ENST00000375703 ATXN3LQ9H3M9 355 aa14.7□□□□□ -0.06
MSH5-201ENST00000375703 RBM22Q9NW64 420 aaKnown RBP eCLIP14.7□□□□□ -0.062e-13■■■■■ 57.4
MSH5-201ENST00000375703 ADA2Q9NZK5 511 aa14.7□□□□□ -0.06
MSH5-201ENST00000375703 NDUFA13Q9P0J0 144 aa14.7□□□□□ -0.06
MSH5-201ENST00000375703 FBXO5Q9UKT4 447 aa14.7□□□□□ -0.06
MSH5-201ENST00000375703 SMIM31A0A1B0GVY4 71 aa14.7□□□□□ -0.06
MSH5-201ENST00000375703 KPNA2P52292 529 aaKnown RBP14.7□□□□□ -0.06
MSH5-201ENST00000375703 DNAJB13P59910 316 aa14.7□□□□□ -0.06
MSH5-201ENST00000375703 POU4F1Q01851 419 aa14.7□□□□□ -0.06
MSH5-201ENST00000375703 SEPT6Q14141 434 aa14.7□□□□□ -0.06
MSH5-201ENST00000375703 CNSTQ6PJW8 725 aa14.7□□□□□ -0.06
MSH5-201ENST00000375703 SPATA24Q86W54 205 aa14.7□□□□□ -0.06
MSH5-201ENST00000375703 RNF135Q8IUD6 432 aa14.7□□□□□ -0.06
MSH5-201ENST00000375703 LPPQ93052 612 aa14.7□□□□□ -0.06
MSH5-201ENST00000375703 FAM105AQ9NUU6 356 aa14.7□□□□□ -0.06
MSH5-201ENST00000375703 AP4B1Q9Y6B7 739 aa14.7□□□□□ -0.06
MSH5-201ENST00000375703 NEMP2A6NFY4 417 aa14.69□□□□□ -0.06
MSH5-201ENST00000375703 CASTOR2A6NHX0 329 aa14.69□□□□□ -0.06
MSH5-201ENST00000375703 ACOT8O14734 319 aa14.69□□□□□ -0.06
MSH5-201ENST00000375703 ADRA1AP35348 466 aa14.69□□□□□ -0.06
MSH5-201ENST00000375703 CSHL1Q14406 222 aa14.69□□□□□ -0.06
MSH5-201ENST00000375703 TIGD5Q53EQ6 642 aa14.69□□□□□ -0.06
MSH5-201ENST00000375703 NEPROQ6NW34 567 aa14.69□□□□□ -0.06
MSH5-201ENST00000375703 TICAM1Q8IUC6 712 aa14.69□□□□□ -0.06
MSH5-201ENST00000375703 CCDC117Q8IWD4 279 aaPredicted RBP14.69□□□□□ -0.06
MSH5-201ENST00000375703 GALNT4Q8N4A0 578 aa14.69□□□□□ -0.06
MSH5-201ENST00000375703 LZTR1Q8N653 840 aa14.69□□□□□ -0.06
MSH5-201ENST00000375703 FAM156AQ8NDB6 213 aa14.69□□□□□ -0.06
MSH5-201ENST00000375703 CNBD2Q96M20 576 aa14.69□□□□□ -0.06
MSH5-201ENST00000375703 HAPLN3Q96S86 360 aa14.69□□□□□ -0.06
MSH5-201ENST00000375703 PAAF1Q9BRP4 392 aa14.69□□□□□ -0.06
MSH5-201ENST00000375703 ARHGEF38Q9NXL2 777 aa14.69□□□□□ -0.06
MSH5-201ENST00000375703 CLIC5Q9NZA1 410 aa14.69□□□□□ -0.06
MSH5-201ENST00000375703 MRPL42Q9Y6G3 142 aaKnown RBP14.69□□□□□ -0.06
MSH5-201ENST00000375703 KCNU1A8MYU2 1149 aa14.69□□□□□ -0.06
MSH5-201ENST00000375703 TRIM38O00635 465 aa14.69□□□□□ -0.06
MSH5-201ENST00000375703 RTN3O95197 1032 aaPredicted RBP14.69□□□□□ -0.06
MSH5-201ENST00000375703 PTK2BQ14289 1009 aa14.69□□□□□ -0.06
MSH5-201ENST00000375703 FAM83EQ2M2I3 478 aa14.69□□□□□ -0.06
MSH5-201ENST00000375703 ZNF280DQ6N043 979 aa14.69□□□□□ -0.06
MSH5-201ENST00000375703 GK5Q6ZS86 529 aa14.69□□□□□ -0.06
MSH5-201ENST00000375703 ANKRD23Q86SG2 305 aa14.69□□□□□ -0.06
MSH5-201ENST00000375703 KLHL32Q96NJ5 620 aa14.69□□□□□ -0.06
MSH5-201ENST00000375703 CATSPERBQ9H7T0 1116 aa14.69□□□□□ -0.06
MSH5-201ENST00000375703 MRM3Q9HC36 420 aaKnown RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms