RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 PSMA2P25787 234 aa12.41□□□□□ -0.42
LSM2-208ENST00000375661 MAT2AP31153 395 aaKnown RBP12.41□□□□□ -0.42
LSM2-208ENST00000375661 CCR1P32246 355 aa12.41□□□□□ -0.42
LSM2-208ENST00000375661 STK19P49842 368 aaPredicted RBP12.41□□□□□ -0.42
LSM2-208ENST00000375661 CCZ1BP86790 482 aa12.41□□□□□ -0.42
LSM2-208ENST00000375661 CCZ1P86791 482 aaPredicted RBP12.41□□□□□ -0.42
LSM2-208ENST00000375661 MTA1Q13330 715 aa12.41□□□□□ -0.42
LSM2-208ENST00000375661 SPA17Q15506 151 aa12.41□□□□□ -0.42
LSM2-208ENST00000375661 RABGAP1LQ5R372 815 aa12.41□□□□□ -0.42
LSM2-208ENST00000375661 AGBL4Q5VU57 503 aa12.41□□□□□ -0.42
LSM2-208ENST00000375661 RAP1GAP2Q684P5 730 aa12.41□□□□□ -0.42
LSM2-208ENST00000375661 STRADAQ7RTN6 431 aa12.41□□□□□ -0.42
LSM2-208ENST00000375661 CCAR2Q8N163 923 aaKnown RBP12.41□□□□□ -0.42
LSM2-208ENST00000375661 SLC25A45Q8N413 288 aa12.41□□□□□ -0.42
LSM2-208ENST00000375661 ARFGAP1Q8N6T3 406 aa12.41□□□□□ -0.42
LSM2-208ENST00000375661 TMEM145Q8NBT3 493 aa12.41□□□□□ -0.42
LSM2-208ENST00000375661 SNRNP27Q8WVK2 155 aaKnown RBP12.41□□□□□ -0.42
LSM2-208ENST00000375661 ANP32BQ92688 251 aaKnown RBP12.41□□□□□ -0.42
LSM2-208ENST00000375661 BTBD6Q96KE9 485 aa12.41□□□□□ -0.42
LSM2-208ENST00000375661 DPH1Q9BZG8 443 aa12.41□□□□□ -0.42
LSM2-208ENST00000375661 TMPRSS4Q9NRS4 437 aa12.41□□□□□ -0.42
LSM2-208ENST00000375661 SLC25A13Q9UJS0 675 aa12.41□□□□□ -0.42
LSM2-208ENST00000375661 PPM1HQ9ULR3 514 aa12.41□□□□□ -0.42
LSM2-208ENST00000375661 KALRNO60229 2985 aa12.41□□□□□ -0.42
LSM2-208ENST00000375661 FLNBO75369 2602 aaKnown RBP12.4□□□□□ -0.42
LSM2-208ENST00000375661 NEMP2A6NFY4 417 aa12.4□□□□□ -0.42
LSM2-208ENST00000375661 THEGLP0DJG4 465 aa12.4□□□□□ -0.42
LSM2-208ENST00000375661 VAV1P15498 845 aa12.4□□□□□ -0.42
LSM2-208ENST00000375661 LSSP48449 732 aa12.4□□□□□ -0.42
LSM2-208ENST00000375661 DUSP3P51452 185 aaPredicted RBP12.4□□□□□ -0.42
LSM2-208ENST00000375661 CNTN1Q12860 1018 aa12.4□□□□□ -0.42
LSM2-208ENST00000375661 TCEAL1Q15170 157 aa12.4□□□□□ -0.42
LSM2-208ENST00000375661 BRMS1LQ5PSV4 323 aa12.4□□□□□ -0.42
LSM2-208ENST00000375661 IGF2-ASQ6U949 168 aa12.4□□□□□ -0.42
LSM2-208ENST00000375661 FAM131BQ86XD5 332 aa12.4□□□□□ -0.42
LSM2-208ENST00000375661 DCP2Q8IU60 420 aaKnown RBP12.4□□□□□ -0.42
LSM2-208ENST00000375661 FAM181AQ8N9Y4 354 aa12.4□□□□□ -0.42
LSM2-208ENST00000375661 CCDC112Q8NEF3 446 aa12.4□□□□□ -0.42
LSM2-208ENST00000375661 SLC35G2Q8TBE7 412 aa12.4□□□□□ -0.42
LSM2-208ENST00000375661 ZNF564Q8TBZ8 553 aaPredicted RBP12.4□□□□□ -0.42
LSM2-208ENST00000375661 RNF34Q969K3 372 aa12.4□□□□□ -0.42
LSM2-208ENST00000375661 GRAMD1AQ96CP6 724 aa12.4□□□□□ -0.42
LSM2-208ENST00000375661 PRMT1Q99873 361 aaKnown RBP12.4□□□□□ -0.42
LSM2-208ENST00000375661 DESI2Q9BSY9 194 aa12.4□□□□□ -0.42
LSM2-208ENST00000375661 DUSP23Q9BVJ7 150 aa12.4□□□□□ -0.42
LSM2-208ENST00000375661 TKTL2Q9H0I9 626 aa12.4□□□□□ -0.42
LSM2-208ENST00000375661 WDCPQ9H6R7 721 aa12.4□□□□□ -0.42
LSM2-208ENST00000375661 POLR1BQ9H9Y6 1135 aa12.4□□□□□ -0.42
LSM2-208ENST00000375661 TMEM51Q9NW97 253 aa12.4□□□□□ -0.42
LSM2-208ENST00000375661 NLGN3Q9NZ94 848 aa12.4□□□□□ -0.42
LSM2-208ENST00000375661 CTTNBP2NLQ9P2B4 639 aa12.4□□□□□ -0.42
LSM2-208ENST00000375661 UVRAGQ9P2Y5 699 aa12.4□□□□□ -0.42
LSM2-208ENST00000375661 ANAPC7Q9UJX3 599 aa12.4□□□□□ -0.42
LSM2-208ENST00000375661 SARDHQ9UL12 918 aa12.4□□□□□ -0.42
LSM2-208ENST00000375661 PCDHB1Q9Y5F3 818 aa12.4□□□□□ -0.42
LSM2-208ENST00000375661 COL27A1Q8IZC6 1860 aaPredicted RBP12.4□□□□□ -0.42
LSM2-208ENST00000375661 TRPM6Q9BX84 2022 aa12.39□□□□□ -0.43
LSM2-208ENST00000375661 A0A0U1RQJ8 604 aa12.39□□□□□ -0.43
LSM2-208ENST00000375661 ARHGAP6O43182 974 aa12.39□□□□□ -0.43
LSM2-208ENST00000375661 OPA1O60313 960 aa12.39□□□□□ -0.43
LSM2-208ENST00000375661 PAGE1O75459 146 aa12.39□□□□□ -0.43
LSM2-208ENST00000375661 PIAS2O75928 621 aa12.39□□□□□ -0.43
LSM2-208ENST00000375661 MTA2O94776 668 aa12.39□□□□□ -0.43
LSM2-208ENST00000375661 ADRA1BP35368 520 aa12.39□□□□□ -0.43
LSM2-208ENST00000375661 METAP1P53582 386 aa12.39□□□□□ -0.43
LSM2-208ENST00000375661 GABREP78334 506 aa12.39□□□□□ -0.43
LSM2-208ENST00000375661 DLG2Q15700 870 aa12.39□□□□□ -0.43
LSM2-208ENST00000375661 ACCSLQ4AC99 568 aa12.39□□□□□ -0.43
LSM2-208ENST00000375661 CXorf57Q6NSI4 855 aaKnown RBP12.39□□□□□ -0.43
LSM2-208ENST00000375661 CPNE8Q86YQ8 564 aa12.39□□□□□ -0.43
LSM2-208ENST00000375661 CCDC185Q8N715 623 aa12.39□□□□□ -0.43
LSM2-208ENST00000375661 KCNE4Q8WWG9 221 aa12.39□□□□□ -0.43
LSM2-208ENST00000375661 ALG14Q96F25 216 aa12.39□□□□□ -0.43
LSM2-208ENST00000375661 LACRTQ9GZZ8 138 aa12.39□□□□□ -0.43
LSM2-208ENST00000375661 THSD1Q9NS62 852 aa12.39□□□□□ -0.43
LSM2-208ENST00000375661 SSUH2Q9Y2M2 353 aa12.39□□□□□ -0.43
LSM2-208ENST00000375661 FARP1Q9Y4F1 1045 aaPredicted RBP12.39□□□□□ -0.43
LSM2-208ENST00000375661 SNX10Q9Y5X0 201 aa12.39□□□□□ -0.43
LSM2-208ENST00000375661 HS3ST4Q9Y661 456 aa12.39□□□□□ -0.43
LSM2-208ENST00000375661 MYO1FO00160 1098 aa12.38□□□□□ -0.43
LSM2-208ENST00000375661 PJA2O43164 708 aa12.38□□□□□ -0.43
LSM2-208ENST00000375661 GIMD1P0DJR0 217 aa12.38□□□□□ -0.43
LSM2-208ENST00000375661 TCF4P15884 667 aa12.38□□□□□ -0.43
LSM2-208ENST00000375661 HNRNPA2B1P22626 353 aaKnown RBP12.38□□□□□ -0.43
LSM2-208ENST00000375661 AKT2P31751 481 aa12.38□□□□□ -0.43
LSM2-208ENST00000375661 GGCXP38435 758 aa12.38□□□□□ -0.43
LSM2-208ENST00000375661 VAV2P52735 878 aa12.38□□□□□ -0.43
LSM2-208ENST00000375661 TAS2R38P59533 333 aa12.38□□□□□ -0.43
LSM2-208ENST00000375661 KRT83P78385 493 aa12.38□□□□□ -0.43
LSM2-208ENST00000375661 ARTNQ5T4W7 220 aa12.38□□□□□ -0.43
LSM2-208ENST00000375661 C14orf80Q86SX3 495 aa12.38□□□□□ -0.43
LSM2-208ENST00000375661 HORMAD1Q86X24 394 aa12.38□□□□□ -0.43
LSM2-208ENST00000375661 RHOT2Q8IXI1 618 aa12.38□□□□□ -0.43
LSM2-208ENST00000375661 ZNF683Q8IZ20 524 aa12.38□□□□□ -0.43
LSM2-208ENST00000375661 SH2D3CQ8N5H7 860 aa12.38□□□□□ -0.43
LSM2-208ENST00000375661 NIPA2Q8N8Q9 360 aa12.38□□□□□ -0.43
LSM2-208ENST00000375661 NTAN1Q96AB6 310 aa12.38□□□□□ -0.43
LSM2-208ENST00000375661 APOLD1Q96LR9 279 aa12.38□□□□□ -0.43
LSM2-208ENST00000375661 CCDC114Q96M63 670 aa12.38□□□□□ -0.43
LSM2-208ENST00000375661 PEBP4Q96S96 227 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms