RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 KCNT2Q6UVM3 1135 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 ECHDC2Q86YB7 292 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 DENND6AQ8IWF6 608 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 C18orf25Q96B23 403 aaPredicted RBP10.28□□□□□ -0.76
PTCH1-204ENST00000375290 SHCBP1LQ9BZQ2 653 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 TAS2R7Q9NYW3 318 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 SLC9A8Q9Y2E8 581 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 WDR27A2RRH5 827 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 SERPINB7O75635 380 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 MOCS2O96007 188 aaPredicted RBP10.28□□□□□ -0.76
PTCH1-204ENST00000375290 STYK1Q6J9G0 422 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 EGFL6Q8IUX8 553 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 THRSPQ92748 146 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 ORC5O43913 435 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 NRP2O60462 931 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 CST1P01037 141 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 FUT11Q495W5 492 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 ZNF772Q68DY9 489 aaPredicted RBP10.28□□□□□ -0.76
PTCH1-204ENST00000375290 EFCAB12Q6NXP0 572 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 PAGE2Q7Z2X7 111 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 SLCO6A1Q86UG4 719 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 DNAAF5Q86Y56 855 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 ADGRF2Q8IZF7 708 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 SCUBE2Q9NQ36 999 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 UBXN8O00124 270 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 GYS1P13807 737 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 ASMTP46597 345 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 RARRES1P49788 294 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 PNLIPRP1P54315 467 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 ABRQ12979 859 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 PLD1Q13393 1074 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 EPHX4Q8IUS5 362 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 EEF1AKMT1Q8WVE0 214 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 ERMAPQ96PL5 475 aaPredicted RBP10.28□□□□□ -0.76
PTCH1-204ENST00000375290 RNF157Q96PX1 679 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 MNTQ99583 582 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 AGO4Q9HCK5 861 aaKnown RBP10.28□□□□□ -0.76
PTCH1-204ENST00000375290 THUMPD1Q9NXG2 353 aaKnown RBP10.28□□□□□ -0.76
PTCH1-204ENST00000375290 TFR2Q9UP52 801 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 DLG5Q8TDM6 1919 aa10.28□□□□□ -0.76
PTCH1-204ENST00000375290 NFASCO94856 1347 aa10.27□□□□□ -0.76
PTCH1-204ENST00000375290 KNDC1Q76NI1 1749 aa10.27□□□□□ -0.76
PTCH1-204ENST00000375290 GPR182O15218 404 aa10.27□□□□□ -0.76
PTCH1-204ENST00000375290 PTPN3P26045 913 aa10.27□□□□□ -0.76
PTCH1-204ENST00000375290 SLC7A1P30825 629 aa10.27□□□□□ -0.76
PTCH1-204ENST00000375290 MFSD14CQ5VZR4 134 aa10.27□□□□□ -0.76
PTCH1-204ENST00000375290 ZBTB8BQ8NAP8 495 aaPredicted RBP10.27□□□□□ -0.76
PTCH1-204ENST00000375290 TSPAN16Q9UKR8 245 aa10.27□□□□□ -0.76
PTCH1-204ENST00000375290 SLITRK3O94933 977 aa10.27□□□□□ -0.76
PTCH1-204ENST00000375290 BMP6P22004 513 aa10.27□□□□□ -0.76
PTCH1-204ENST00000375290 TCEAL1Q15170 157 aa10.27□□□□□ -0.76
PTCH1-204ENST00000375290 TBC1D10BQ4KMP7 808 aaPredicted RBP10.27□□□□□ -0.76
PTCH1-204ENST00000375290 HGSNATQ68CP4 663 aa10.27□□□□□ -0.76
PTCH1-204ENST00000375290 ZZZ3Q8IYH5 903 aa10.27□□□□□ -0.76
PTCH1-204ENST00000375290 TMEM143Q96AN5 459 aa10.27□□□□□ -0.76
PTCH1-204ENST00000375290 PNMA5Q96PV4 448 aa10.27□□□□□ -0.76
PTCH1-204ENST00000375290 ZNF607Q96SK3 696 aa10.27□□□□□ -0.76
PTCH1-204ENST00000375290 TSEN34Q9BSV6 310 aaKnown RBP10.27□□□□□ -0.76
PTCH1-204ENST00000375290 CXorf21Q9HAI6 301 aa10.27□□□□□ -0.76
PTCH1-204ENST00000375290 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.27□□□□□ -0.76
PTCH1-204ENST00000375290 TEX46H3BTG2 121 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 IFNA7P01567 189 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 SHBGP04278 402 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 MYL9P24844 172 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 UBE3AQ05086 875 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 SHROOM1Q2M3G4 852 aaPredicted RBP10.27□□□□□ -0.77
PTCH1-204ENST00000375290 ZNF470Q6ECI4 717 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 METTL7BQ6UX53 244 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 SLC25A41Q8N5S1 370 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 SPPL2AQ8TCT8 520 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 APOL5Q9BWW9 433 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 HIPK3Q9H422 1215 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 CATSPERZQ9NTU4 200 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 ITM2BQ9Y287 266 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 PCDHB12Q9Y5F1 795 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 ULK1O75385 1050 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 APBA3O96018 575 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 S100A6P06703 90 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 HOXD10P28358 340 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 RPS9P46781 194 aaKnown RBP10.27□□□□□ -0.77
PTCH1-204ENST00000375290 MAPKAPK2P49137 400 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 FAM189A2Q15884 450 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 NOP9Q86U38 636 aaKnown RBP10.27□□□□□ -0.77
PTCH1-204ENST00000375290 OOSP2Q86WS3 158 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 RBM15BQ8NDT2 890 aaKnown RBP10.27□□□□□ -0.77
PTCH1-204ENST00000375290 RFKQ969G6 155 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 MBOAT7Q96N66 472 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 POLD4Q9HCU8 107 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 H3BN98 237 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 TMCC2O75069 709 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 SLC22A3O75751 556 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 CCNHP51946 323 aaPredicted RBP10.27□□□□□ -0.77
PTCH1-204ENST00000375290 LINC00471Q8N535 108 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 PHF10Q8WUB8 498 aaKnown RBP10.27□□□□□ -0.77
PTCH1-204ENST00000375290 ZCWPW1Q9H0M4 648 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 POMKQ9H5K3 350 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 DNAAF2Q9NVR5 837 aaKnown RBP10.27□□□□□ -0.77
PTCH1-204ENST00000375290 DPP7Q9UHL4 492 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 SNX7Q9UNH6 387 aa10.27□□□□□ -0.77
PTCH1-204ENST00000375290 COQ6Q9Y2Z9 468 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms