RNA–Protein interactions for RNA: ENST00000373700.8

HERC4-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HERC4, Length 3,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-202ENST00000373700 SMNDC1O75940 238 aaKnown RBP eCLIP7.89□□□□□ -1.15
HERC4-202ENST00000373700 MPOP05164 745 aa7.89□□□□□ -1.15
HERC4-202ENST00000373700 ACADSP16219 412 aa7.89□□□□□ -1.15
HERC4-202ENST00000373700 NFKBIAP25963 317 aa7.89□□□□□ -1.15
HERC4-202ENST00000373700 RPL14P50914 215 aaKnown RBP7.89□□□□□ -1.15
HERC4-202ENST00000373700 ELAVL2Q12926 359 aaKnown RBP7.89□□□□□ -1.15
HERC4-202ENST00000373700 TCEA2Q15560 299 aa7.89□□□□□ -1.15
HERC4-202ENST00000373700 FAM72AQ5TYM5 149 aa7.89□□□□□ -1.15
HERC4-202ENST00000373700 FAM72DQ6L9T8 149 aa7.89□□□□□ -1.15
HERC4-202ENST00000373700 DNAJC14Q6Y2X3 702 aaPredicted RBP7.89□□□□□ -1.15
HERC4-202ENST00000373700 SERINC5Q86VE9 423 aa7.89□□□□□ -1.15
HERC4-202ENST00000373700 FAM72BQ86X60 149 aa7.89□□□□□ -1.15
HERC4-202ENST00000373700 TDRPQ86YL5 185 aa7.89□□□□□ -1.15
HERC4-202ENST00000373700 HPS6Q86YV9 775 aa7.89□□□□□ -1.15
HERC4-202ENST00000373700 PNPLA1Q8N8W4 532 aa7.89□□□□□ -1.15
HERC4-202ENST00000373700 PCYOX1LQ8NBM8 494 aa7.89□□□□□ -1.15
HERC4-202ENST00000373700 GDPD5Q8WTR4 605 aa7.89□□□□□ -1.15
HERC4-202ENST00000373700 C10orf82Q8WW14 230 aa7.89□□□□□ -1.15
HERC4-202ENST00000373700 NFKBIZQ9BYH8 718 aa7.89□□□□□ -1.15
HERC4-202ENST00000373700 OLA1Q9NTK5 396 aaKnown RBP7.89□□□□□ -1.15
HERC4-202ENST00000373700 UXTQ9UBK9 157 aaPredicted RBP7.89□□□□□ -1.15
HERC4-202ENST00000373700 SLC12A4Q9UP95 1085 aa7.89□□□□□ -1.15
HERC4-202ENST00000373700 PCDHB12Q9Y5F1 795 aa7.89□□□□□ -1.15
HERC4-202ENST00000373700 TEX264Q9Y6I9 313 aa7.89□□□□□ -1.15
HERC4-202ENST00000373700 TLL2Q9Y6L7 1015 aa7.89□□□□□ -1.15
HERC4-202ENST00000373700 WASF2Q9Y6W5 498 aa7.89□□□□□ -1.15
HERC4-202ENST00000373700 PFDN1O60925 122 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 TFEBP19484 476 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 IL10P22301 178 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 PTPN3P26045 913 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 PPARGP37231 505 aaPredicted RBP7.88□□□□□ -1.15
HERC4-202ENST00000373700 NNMTP40261 264 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 SERPINH1P50454 418 aaKnown RBP7.88□□□□□ -1.15
HERC4-202ENST00000373700 RHOAP61586 193 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 SLC10A2Q12908 348 aaPredicted RBP7.88□□□□□ -1.15
HERC4-202ENST00000373700 STX5Q13190 355 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 NRF1Q16656 503 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 PCID2Q5JVF3 399 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 NCBP2-AS2Q69YL0 99 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 LRRC8BQ6P9F7 803 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 SZRD1Q7Z422 152 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 NXNL1Q96CM4 212 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 RCN3Q96D15 328 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 ZNF558Q96NG5 402 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 SEMA4BQ9NPR2 832 aaPredicted RBP7.88□□□□□ -1.15
HERC4-202ENST00000373700 COPG2Q9UBF2 871 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 NKX1-2Q9UD57 310 aaPredicted RBP7.88□□□□□ -1.15
HERC4-202ENST00000373700 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.88□□□□□ -1.15
HERC4-202ENST00000373700 TRMT6Q9UJA5 497 aaKnown RBP7.88□□□□□ -1.15
HERC4-202ENST00000373700 RREB1Q92766 1687 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 MOXD2PA6NHM9 499 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 C2orf81A6NN90 581 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 PIRO00625 290 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 PLIN3O60664 434 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 SH3BGRLO75368 114 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 GCATO75600 419 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 PYGLP06737 847 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 CRHR1P34998 444 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 GABRB2P47870 512 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 IRF9Q00978 393 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 TMED1Q13445 227 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 PLPP4Q5VZY2 271 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 LPCAT4Q643R3 524 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 MIER2Q8N344 545 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 ARHGAP18Q8N392 663 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 ZNF781Q8N8C0 355 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 NAT16Q8N8M0 369 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 KBTBD7Q8WVZ9 684 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 CASP10Q92851 521 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 NMD3Q96D46 503 aaKnown RBP7.88□□□□□ -1.15
HERC4-202ENST00000373700 PAWRQ96IZ0 340 aaKnown RBP7.88□□□□□ -1.15
HERC4-202ENST00000373700 ZMYND8Q9ULU4 1186 aaPredicted RBP7.88□□□□□ -1.15
HERC4-202ENST00000373700 SAC3D1A6NKF1 404 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 F8W8V4 182 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 ARVCFO00192 962 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 TCEA3O75764 348 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 CHRNGP07510 517 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 NELFEP18615 380 aaKnown RBP7.88□□□□□ -1.15
HERC4-202ENST00000373700 FASTKQ14296 549 aaKnown RBP7.88□□□□□ -1.15
HERC4-202ENST00000373700 TBCCQ15814 346 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 DPYSL2Q16555 572 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 USP41Q3LFD5 358 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 ARL13AQ5H913 290 aaPredicted RBP7.88□□□□□ -1.15
HERC4-202ENST00000373700 SLC30A9Q6PML9 568 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 CAND1Q86VP6 1230 aaKnown RBP7.88□□□□□ -1.15
HERC4-202ENST00000373700 CRYBG2Q8N1P7 616 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 FAM156AQ8NDB6 213 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 OR7D4Q8NG98 312 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 OR10T2Q8NGX3 314 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 PBXIP1Q96AQ6 731 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 PRR11Q96HE9 360 aaPredicted RBP7.88□□□□□ -1.15
HERC4-202ENST00000373700 SEPHS2Q99611 448 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 ACBD6Q9BR61 282 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 GPR62Q9BZJ7 368 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 CCSER2Q9H7U1 834 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 CASS4Q9NQ75 786 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 ARHGEF3Q9NR81 526 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 NMRK1Q9NWW6 199 aa7.88□□□□□ -1.15
HERC4-202ENST00000373700 HEATR9A2RTY3 570 aa7.87□□□□□ -1.15
HERC4-202ENST00000373700 AMHP03971 560 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms