RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 ELF1P32519 619 aa19.79■□□□□ 0.76
HDAC1-201ENST00000373548 SLC1A2P43004 574 aa19.79■□□□□ 0.76
HDAC1-201ENST00000373548 THOC5Q13769 683 aaKnown RBP19.79■□□□□ 0.76
HDAC1-201ENST00000373548 CCDC153Q494R4 210 aa19.79■□□□□ 0.76
HDAC1-201ENST00000373548 ADGRF1Q5T601 910 aa19.79■□□□□ 0.76
HDAC1-201ENST00000373548 TSTD2Q5T7W7 516 aa19.79■□□□□ 0.76
HDAC1-201ENST00000373548 IL31Q6EBC2 164 aa19.79■□□□□ 0.76
HDAC1-201ENST00000373548 MTDHQ86UE4 582 aaKnown RBP19.79■□□□□ 0.76
HDAC1-201ENST00000373548 C10orf107Q8IVU9 208 aa19.79■□□□□ 0.76
HDAC1-201ENST00000373548 PPP1R14CQ8TAE6 165 aa19.79■□□□□ 0.76
HDAC1-201ENST00000373548 UNC5CO95185 931 aa19.79■□□□□ 0.76
HDAC1-201ENST00000373548 SKIV2L2P42285 1042 aaKnown RBP19.79■□□□□ 0.76
HDAC1-201ENST00000373548 PPP3CCP48454 512 aa19.79■□□□□ 0.76
HDAC1-201ENST00000373548 TTC31Q49AM3 519 aaPredicted RBP19.79■□□□□ 0.76
HDAC1-201ENST00000373548 C2CD4AQ8NCU7 369 aaPredicted RBP19.79■□□□□ 0.76
HDAC1-201ENST00000373548 ZNF334Q9HCZ1 680 aaPredicted RBP19.79■□□□□ 0.76
HDAC1-201ENST00000373548 MRPL17Q9NRX2 175 aaKnown RBP19.79■□□□□ 0.76
HDAC1-201ENST00000373548 THAP1Q9NVV9 213 aa19.79■□□□□ 0.76
HDAC1-201ENST00000373548 HEY2Q9UBP5 337 aa19.79■□□□□ 0.76
HDAC1-201ENST00000373548 KIAA0100Q14667 2235 aaKnown RBP19.79■□□□□ 0.76
HDAC1-201ENST00000373548 C2orf71A6NGG8 1288 aa19.78■□□□□ 0.76
HDAC1-201ENST00000373548 KIAA0355O15063 1070 aa19.78■□□□□ 0.76
HDAC1-201ENST00000373548 TEX28O15482 410 aa19.78■□□□□ 0.76
HDAC1-201ENST00000373548 EFCAB14O75071 495 aa19.78■□□□□ 0.76
HDAC1-201ENST00000373548 MYL2P10916 166 aa19.78■□□□□ 0.76
HDAC1-201ENST00000373548 RAG1P15918 1043 aa19.78■□□□□ 0.76
HDAC1-201ENST00000373548 GLDCP23378 1020 aa19.78■□□□□ 0.76
HDAC1-201ENST00000373548 PGGT1BP53609 377 aa19.78■□□□□ 0.76
HDAC1-201ENST00000373548 ZNF470Q6ECI4 717 aa19.78■□□□□ 0.76
HDAC1-201ENST00000373548 ALG1LQ6GMV1 187 aa19.78■□□□□ 0.76
HDAC1-201ENST00000373548 CHST9Q7L1S5 443 aa19.78■□□□□ 0.76
HDAC1-201ENST00000373548 ARID3BQ8IVW6 561 aaPredicted RBP19.78■□□□□ 0.76
HDAC1-201ENST00000373548 MFSD6LQ8IWD5 586 aa19.78■□□□□ 0.76
HDAC1-201ENST00000373548 ZFRQ96KR1 1074 aaKnown RBP19.78■□□□□ 0.76
HDAC1-201ENST00000373548 YME1L1Q96TA2 773 aa19.78■□□□□ 0.76
HDAC1-201ENST00000373548 FAM167BQ9BTA0 163 aa19.78■□□□□ 0.76
HDAC1-201ENST00000373548 SPON2Q9BUD6 331 aa19.78■□□□□ 0.76
HDAC1-201ENST00000373548 SMPD4Q9NXE4 827 aa19.78■□□□□ 0.76
HDAC1-201ENST00000373548 ZFP69BQ9UJL9 534 aa19.78■□□□□ 0.76
HDAC1-201ENST00000373548 TRIM33Q9UPN9 1127 aa19.78■□□□□ 0.76
HDAC1-201ENST00000373548 CFAP73A6NFT4 308 aa19.78■□□□□ 0.76
HDAC1-201ENST00000373548 KDELR3O43731 214 aa19.78■□□□□ 0.76
HDAC1-201ENST00000373548 ITM2AO43736 263 aa19.78■□□□□ 0.76
HDAC1-201ENST00000373548 TSPAN3O60637 253 aa19.78■□□□□ 0.76
HDAC1-201ENST00000373548 PAPSS2O95340 614 aaPredicted RBP19.78■□□□□ 0.76
HDAC1-201ENST00000373548 CPA3P15088 417 aa19.78■□□□□ 0.76
HDAC1-201ENST00000373548 EPHB3P54753 998 aa19.78■□□□□ 0.76
HDAC1-201ENST00000373548 USP10Q14694 798 aaKnown RBP19.78■□□□□ 0.76
HDAC1-201ENST00000373548 TAF1BQ53T94 588 aaPredicted RBP19.78■□□□□ 0.76
HDAC1-201ENST00000373548 NEPROQ6NW34 567 aa19.78■□□□□ 0.76
HDAC1-201ENST00000373548 ASRGL1Q7L266 308 aa19.78■□□□□ 0.76
HDAC1-201ENST00000373548 CRLF3Q8IUI8 442 aa19.78■□□□□ 0.76
HDAC1-201ENST00000373548 SLC41A1Q8IVJ1 513 aa19.78■□□□□ 0.76
HDAC1-201ENST00000373548 TNS4Q8IZW8 715 aa19.78■□□□□ 0.76
HDAC1-201ENST00000373548 OR13J1Q8NGT2 312 aa19.78■□□□□ 0.76
HDAC1-201ENST00000373548 FEM1CQ96JP0 617 aa19.78■□□□□ 0.76
HDAC1-201ENST00000373548 SLC22A12Q96S37 553 aa19.78■□□□□ 0.76
HDAC1-201ENST00000373548 FBXO5Q9UKT4 447 aa19.78■□□□□ 0.76
HDAC1-201ENST00000373548 A0A1B0GVM2 712 aa19.77■□□□□ 0.76
HDAC1-201ENST00000373548 ILVBLA1L0T0 632 aa19.77■□□□□ 0.76
HDAC1-201ENST00000373548 TCAF2A6NFQ2 919 aa19.77■□□□□ 0.76
HDAC1-201ENST00000373548 MROH6A6NGR9 719 aa19.77■□□□□ 0.76
HDAC1-201ENST00000373548 PHGDHO43175 533 aaKnown RBP19.77■□□□□ 0.76
HDAC1-201ENST00000373548 LILRB3O75022 631 aa19.77■□□□□ 0.76
HDAC1-201ENST00000373548 F11P03951 625 aa19.77■□□□□ 0.76
HDAC1-201ENST00000373548 SERPINE1P05121 402 aa19.77■□□□□ 0.76
HDAC1-201ENST00000373548 RHOCP08134 193 aa19.77■□□□□ 0.76
HDAC1-201ENST00000373548 SAT1P21673 171 aa19.77■□□□□ 0.76
HDAC1-201ENST00000373548 OXCT1P55809 520 aa19.77■□□□□ 0.76
HDAC1-201ENST00000373548 KCNJ2P63252 427 aa19.77■□□□□ 0.76
HDAC1-201ENST00000373548 HSF5Q4G112 596 aaPredicted RBP19.77■□□□□ 0.76
HDAC1-201ENST00000373548 SPDYAQ5MJ70 313 aa19.77■□□□□ 0.76
HDAC1-201ENST00000373548 CLNKQ7Z7G1 428 aa19.77■□□□□ 0.76
HDAC1-201ENST00000373548 TBC1D1Q86TI0 1168 aaPredicted RBP19.77■□□□□ 0.76
HDAC1-201ENST00000373548 SKA1Q96BD8 255 aa19.77■□□□□ 0.76
HDAC1-201ENST00000373548 ARMC5Q96C12 935 aa19.77■□□□□ 0.76
HDAC1-201ENST00000373548 KLHL29Q96CT2 875 aa19.77■□□□□ 0.76
HDAC1-201ENST00000373548 CYP2S1Q96SQ9 504 aa19.77■□□□□ 0.76
HDAC1-201ENST00000373548 MGME1Q9BQP7 344 aa19.77■□□□□ 0.76
HDAC1-201ENST00000373548 C1QTNF1Q9BXJ1 281 aa19.77■□□□□ 0.76
HDAC1-201ENST00000373548 TXLNGQ9NUQ3 528 aa19.77■□□□□ 0.76
HDAC1-201ENST00000373548 KCNK4Q9NYG8 393 aa19.77■□□□□ 0.76
HDAC1-201ENST00000373548 UBA2Q9UBT2 640 aaPredicted RBP19.77■□□□□ 0.76
HDAC1-201ENST00000373548 ANKRD6Q9Y2G4 727 aa19.77■□□□□ 0.76
HDAC1-201ENST00000373548 MKI67P46013 3256 aaKnown RBP19.77■□□□□ 0.76
HDAC1-201ENST00000373548 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.76■□□□□ 0.75
HDAC1-201ENST00000373548 FAM95CA0A1B0GW59 222 aa19.76■□□□□ 0.75
HDAC1-201ENST00000373548 LYPLA1O75608 230 aaPredicted RBP19.76■□□□□ 0.75
HDAC1-201ENST00000373548 SPATA31D3P0C874 917 aa19.76■□□□□ 0.75
HDAC1-201ENST00000373548 T-ENOLP0DO92 83 aa19.76■□□□□ 0.75
HDAC1-201ENST00000373548 MBL2P11226 248 aaPredicted RBP19.76■□□□□ 0.75
HDAC1-201ENST00000373548 SERPINB3P29508 390 aa19.76■□□□□ 0.75
HDAC1-201ENST00000373548 PPM1AP35813 382 aa19.76■□□□□ 0.75
HDAC1-201ENST00000373548 CDK18Q07002 472 aa19.76■□□□□ 0.75
HDAC1-201ENST00000373548 ZNF177Q13360 481 aaPredicted RBP19.76■□□□□ 0.75
HDAC1-201ENST00000373548 FBXO46Q6PJ61 603 aaPredicted RBP19.76■□□□□ 0.75
HDAC1-201ENST00000373548 SPATA31D4Q6ZUB0 917 aa19.76■□□□□ 0.75
HDAC1-201ENST00000373548 RAPH1Q70E73 1250 aa19.76■□□□□ 0.75
HDAC1-201ENST00000373548 CCDC91Q7Z6B0 441 aa19.76■□□□□ 0.75
HDAC1-201ENST00000373548 IL21Q9HBE4 155 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms