RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 IGLV3-19P01714 112 aa15.73■□□□□ 0.11
PRPF38B-202ENST00000370022 HLA-DQB2P05538 268 aa15.73■□□□□ 0.11
PRPF38B-202ENST00000370022 SERPINA4P29622 427 aa15.73■□□□□ 0.11
PRPF38B-202ENST00000370022 OXTRP30559 389 aa15.73■□□□□ 0.11
PRPF38B-202ENST00000370022 CNR2P34972 360 aa15.73■□□□□ 0.11
PRPF38B-202ENST00000370022 PXNP49023 591 aaPredicted RBP15.73■□□□□ 0.11
PRPF38B-202ENST00000370022 ITKQ08881 620 aa15.73■□□□□ 0.11
PRPF38B-202ENST00000370022 USP39Q53GS9 565 aaKnown RBP15.73■□□□□ 0.11
PRPF38B-202ENST00000370022 NCEH1Q6PIU2 408 aa15.73■□□□□ 0.11
PRPF38B-202ENST00000370022 GDPD4Q6W3E5 623 aa15.73■□□□□ 0.11
PRPF38B-202ENST00000370022 B4GALNT4Q76KP1 1039 aa15.73■□□□□ 0.11
PRPF38B-202ENST00000370022 CNTD1Q8N815 330 aa15.73■□□□□ 0.11
PRPF38B-202ENST00000370022 C1orf54Q8WWF1 131 aa15.73■□□□□ 0.11
PRPF38B-202ENST00000370022 ATG4AQ8WYN0 398 aa15.73■□□□□ 0.11
PRPF38B-202ENST00000370022 MS4A14Q96JA4 679 aa15.73■□□□□ 0.11
PRPF38B-202ENST00000370022 SPACA7Q96KW9 195 aa15.73■□□□□ 0.11
PRPF38B-202ENST00000370022 TPSD1Q9BZJ3 242 aa15.73■□□□□ 0.11
PRPF38B-202ENST00000370022 SLC6A17Q9H1V8 727 aa15.73■□□□□ 0.11
PRPF38B-202ENST00000370022 KLHL8Q9P2G9 620 aaPredicted RBP15.73■□□□□ 0.11
PRPF38B-202ENST00000370022 FZD4Q9ULV1 537 aa15.73■□□□□ 0.11
PRPF38B-202ENST00000370022 TTLL3Q9Y4R7 772 aa15.73■□□□□ 0.11
PRPF38B-202ENST00000370022 PCDHGA2Q9Y5H1 932 aa15.73■□□□□ 0.11
PRPF38B-202ENST00000370022 A0A1W2PQ67 120 aa15.72■□□□□ 0.11
PRPF38B-202ENST00000370022 KPNA3O00505 521 aaPredicted RBP15.72■□□□□ 0.11
PRPF38B-202ENST00000370022 ZNF185O15231 689 aa15.72■□□□□ 0.11
PRPF38B-202ENST00000370022 MID1O15344 667 aa15.72■□□□□ 0.11
PRPF38B-202ENST00000370022 SLC7A4O43246 635 aa15.72■□□□□ 0.11
PRPF38B-202ENST00000370022 SOCS5O75159 536 aa15.72■□□□□ 0.11
PRPF38B-202ENST00000370022 ITGAVP06756 1048 aa15.72■□□□□ 0.11
PRPF38B-202ENST00000370022 ITGB7P26010 798 aa15.72■□□□□ 0.11
PRPF38B-202ENST00000370022 FNTBP49356 437 aa15.72■□□□□ 0.11
PRPF38B-202ENST00000370022 MAXP61244 160 aa15.72■□□□□ 0.11
PRPF38B-202ENST00000370022 BCL2L1Q07817 233 aa15.72■□□□□ 0.11
PRPF38B-202ENST00000370022 OASLQ15646 514 aaKnown RBP15.72■□□□□ 0.11
PRPF38B-202ENST00000370022 ZNF805Q5CZA5 627 aa15.72■□□□□ 0.11
PRPF38B-202ENST00000370022 C11orf74Q86VG3 221 aa15.72■□□□□ 0.11
PRPF38B-202ENST00000370022 ZBTB44Q8NCP5 570 aa15.72■□□□□ 0.11
PRPF38B-202ENST00000370022 AGAP3Q96P47 875 aa15.72■□□□□ 0.11
PRPF38B-202ENST00000370022 OMDQ99983 421 aa15.72■□□□□ 0.11
PRPF38B-202ENST00000370022 SEMA3CQ99985 751 aa15.72■□□□□ 0.11
PRPF38B-202ENST00000370022 USP29Q9HBJ7 922 aa15.72■□□□□ 0.11
PRPF38B-202ENST00000370022 NOD2Q9HC29 1040 aa15.72■□□□□ 0.11
PRPF38B-202ENST00000370022 DKK3Q9UBP4 350 aa15.72■□□□□ 0.11
PRPF38B-202ENST00000370022 SARDHQ9UL12 918 aa15.72■□□□□ 0.11
PRPF38B-202ENST00000370022 ZNF148Q9UQR1 794 aa15.72■□□□□ 0.11
PRPF38B-202ENST00000370022 DRG1Q9Y295 367 aaKnown RBP15.72■□□□□ 0.11
PRPF38B-202ENST00000370022 C5orf60A6NFR6 353 aa15.71■□□□□ 0.11
PRPF38B-202ENST00000370022 SERPINF2P08697 491 aa15.71■□□□□ 0.11
PRPF38B-202ENST00000370022 CA4P22748 312 aa15.71■□□□□ 0.11
PRPF38B-202ENST00000370022 PAFAH1B1P43034 410 aa15.71■□□□□ 0.11
PRPF38B-202ENST00000370022 TPMTP51580 245 aa15.71■□□□□ 0.11
PRPF38B-202ENST00000370022 DMWDQ09019 674 aa15.71■□□□□ 0.11
PRPF38B-202ENST00000370022 SLC14A2Q15849 920 aa15.71■□□□□ 0.11
PRPF38B-202ENST00000370022 ITPRIPL1Q6GPH6 555 aa15.71■□□□□ 0.11
PRPF38B-202ENST00000370022 PID1Q7Z2X4 250 aa15.71■□□□□ 0.11
PRPF38B-202ENST00000370022 CACUL1Q86Y37 369 aa15.71■□□□□ 0.11
PRPF38B-202ENST00000370022 CREG2Q8IUH2 290 aa15.71■□□□□ 0.11
PRPF38B-202ENST00000370022 ZNF567Q8N184 647 aa15.71■□□□□ 0.11
PRPF38B-202ENST00000370022 PRELID2Q8N945 189 aa15.71■□□□□ 0.11
PRPF38B-202ENST00000370022 ARRDC2Q8TBH0 407 aa15.71■□□□□ 0.11
PRPF38B-202ENST00000370022 FAM131CQ96AQ9 280 aa15.71■□□□□ 0.11
PRPF38B-202ENST00000370022 VOPP1Q96AW1 172 aa15.71■□□□□ 0.11
PRPF38B-202ENST00000370022 RTP4Q96DX8 246 aa15.71■□□□□ 0.11
PRPF38B-202ENST00000370022 PPP1R2P1Q96PQ5 205 aa15.71■□□□□ 0.11
PRPF38B-202ENST00000370022 TMEM121Q9BTD3 319 aa15.71■□□□□ 0.11
PRPF38B-202ENST00000370022 HDAC8Q9BY41 377 aa15.71■□□□□ 0.11
PRPF38B-202ENST00000370022 SLC25A51Q9H1U9 297 aa15.71■□□□□ 0.11
PRPF38B-202ENST00000370022 SUV39H2Q9H5I1 410 aa15.71■□□□□ 0.11
PRPF38B-202ENST00000370022 FBXL12Q9NXK8 326 aa15.71■□□□□ 0.11
PRPF38B-202ENST00000370022 SHROOM3Q8TF72 1996 aa15.71■□□□□ 0.11
PRPF38B-202ENST00000370022 OPHN1O60890 802 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 RNASEH2AO75792 299 aaKnown RBP15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 UGT2B4P06133 528 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 GKP32189 559 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 P2RY2P41231 377 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 LMNB2Q03252 620 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 CYP1B1Q16678 543 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 P3H1Q32P28 736 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 CFAP58Q5T655 872 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 BRAT1Q6PJG6 821 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 ZC3H14Q6PJT7 736 aaKnown RBP15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 HDDC3Q8N4P3 179 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 AADATQ8N5Z0 425 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 C12orf50Q8NA57 414 aaPredicted RBP15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 SPOCK2Q92563 424 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 IMP4Q96G21 291 aaKnown RBP15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 SPATA13Q96N96 652 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 CEP41Q9BYV8 373 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 C10orf88Q9H8K7 445 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 SGK2Q9HBY8 427 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 GLOD4Q9HC38 313 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 ZNF318Q5VUA4 2279 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 CACNA1IQ9P0X4 2223 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 A0A1W2PP55 124 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 TSPAN11A1L157 253 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 TRAFD1O14545 582 aaPredicted RBP15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 GCATO75600 419 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 PIGNO95427 931 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 CD6P30203 668 aa15.7■□□□□ 0.1
PRPF38B-202ENST00000370022 DRD3P35462 400 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms