RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 LAMA1P25391 3075 aa15.28■□□□□ 0.04
SMPDL3A-201ENST00000368440 METTL12A8MUP2 240 aa15.27■□□□□ 0.04
SMPDL3A-201ENST00000368440 PATE3B3GLJ2 98 aa15.27■□□□□ 0.04
SMPDL3A-201ENST00000368440 DDX3YO15523 660 aaKnown RBP15.27■□□□□ 0.04
SMPDL3A-201ENST00000368440 PLRG1O43660 514 aaKnown RBP15.27■□□□□ 0.04
SMPDL3A-201ENST00000368440 ITGB7P26010 798 aa15.27■□□□□ 0.04
SMPDL3A-201ENST00000368440 MAXP61244 160 aa15.27■□□□□ 0.04
SMPDL3A-201ENST00000368440 SFSWAPQ12872 951 aaKnown RBP15.27■□□□□ 0.04
SMPDL3A-201ENST00000368440 ZNF235Q14590 738 aa15.27■□□□□ 0.04
SMPDL3A-201ENST00000368440 ZNF662Q6ZS27 426 aa15.27■□□□□ 0.04
SMPDL3A-201ENST00000368440 ERN2Q76MJ5 926 aaKnown RBP15.27■□□□□ 0.04
SMPDL3A-201ENST00000368440 CADM4Q8NFZ8 388 aa15.27■□□□□ 0.04
SMPDL3A-201ENST00000368440 HAUS1Q96CS2 278 aa15.27■□□□□ 0.04
SMPDL3A-201ENST00000368440 TSGA13Q96PP4 275 aa15.27■□□□□ 0.04
SMPDL3A-201ENST00000368440 PCDHGA5Q9Y5G8 931 aa15.27■□□□□ 0.04
SMPDL3A-201ENST00000368440 SLCO1B1Q9Y6L6 691 aa15.27■□□□□ 0.04
SMPDL3A-201ENST00000368440 ZNF292O60281 2723 aa15.27■□□□□ 0.04
SMPDL3A-201ENST00000368440 DOCK9Q9BZ29 2069 aa15.27■□□□□ 0.03
SMPDL3A-201ENST00000368440 MEI4A8MW99 385 aa15.27■□□□□ 0.03
SMPDL3A-201ENST00000368440 C10orf142B7Z368 130 aa15.27■□□□□ 0.03
SMPDL3A-201ENST00000368440 FSBPO95073 299 aa15.27■□□□□ 0.03
SMPDL3A-201ENST00000368440 IGHV4-34P06331 123 aa15.27■□□□□ 0.03
SMPDL3A-201ENST00000368440 PYGMP11217 842 aa15.27■□□□□ 0.03
SMPDL3A-201ENST00000368440 ZFXP17010 805 aaPredicted RBP15.27■□□□□ 0.03
SMPDL3A-201ENST00000368440 CCNCP24863 283 aa15.27■□□□□ 0.03
SMPDL3A-201ENST00000368440 MMP13P45452 471 aa15.27■□□□□ 0.03
SMPDL3A-201ENST00000368440 RWDD2BP57060 319 aa15.27■□□□□ 0.03
SMPDL3A-201ENST00000368440 PPP2CBP62714 309 aa15.27■□□□□ 0.03
SMPDL3A-201ENST00000368440 PPP2CAP67775 309 aa15.27■□□□□ 0.03
SMPDL3A-201ENST00000368440 ZNF211Q13398 564 aaPredicted RBP15.27■□□□□ 0.03
SMPDL3A-201ENST00000368440 TFDP2Q14188 446 aa15.27■□□□□ 0.03
SMPDL3A-201ENST00000368440 PPP2R5EQ16537 467 aa15.27■□□□□ 0.03
SMPDL3A-201ENST00000368440 PLA2G2CQ5R387 149 aa15.27■□□□□ 0.03
SMPDL3A-201ENST00000368440 MARC1Q5VT66 337 aa15.27■□□□□ 0.03
SMPDL3A-201ENST00000368440 TCEAL6Q6IPX3 200 aa15.27■□□□□ 0.03
SMPDL3A-201ENST00000368440 GDPD4Q6W3E5 623 aa15.27■□□□□ 0.03
SMPDL3A-201ENST00000368440 NYAP1Q6ZVC0 841 aa15.27■□□□□ 0.03
SMPDL3A-201ENST00000368440 SRLQ86TD4 932 aa15.27■□□□□ 0.03
SMPDL3A-201ENST00000368440 LRRC49Q8IUZ0 686 aa15.27■□□□□ 0.03
SMPDL3A-201ENST00000368440 TEX26Q8N6G2 289 aa15.27■□□□□ 0.03
SMPDL3A-201ENST00000368440 CCNYQ8ND76 341 aa15.27■□□□□ 0.03
SMPDL3A-201ENST00000368440 OR2T34Q8NGX1 318 aa15.27■□□□□ 0.03
SMPDL3A-201ENST00000368440 MAML1Q92585 1016 aa15.27■□□□□ 0.03
SMPDL3A-201ENST00000368440 TCEAL3Q969E4 200 aa15.27■□□□□ 0.03
SMPDL3A-201ENST00000368440 BIRC7Q96CA5 298 aa15.27■□□□□ 0.03
SMPDL3A-201ENST00000368440 PPP1R16AQ96I34 528 aa15.27■□□□□ 0.03
SMPDL3A-201ENST00000368440 LRIG1Q96JA1 1093 aa15.27■□□□□ 0.03
SMPDL3A-201ENST00000368440 HDAC8Q9BY41 377 aa15.27■□□□□ 0.03
SMPDL3A-201ENST00000368440 DYRK4Q9NR20 520 aa15.27■□□□□ 0.03
SMPDL3A-201ENST00000368440 PILRBQ9UKJ0 227 aa15.27■□□□□ 0.03
SMPDL3A-201ENST00000368440 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.27■□□□□ 0.03
SMPDL3A-201ENST00000368440 MATN3O15232 486 aa15.26■□□□□ 0.03
SMPDL3A-201ENST00000368440 SLC7A4O43246 635 aa15.26■□□□□ 0.03
SMPDL3A-201ENST00000368440 CR2P20023 1033 aa15.26■□□□□ 0.03
SMPDL3A-201ENST00000368440 MX2P20592 715 aa15.26■□□□□ 0.03
SMPDL3A-201ENST00000368440 ABL2P42684 1182 aa15.26■□□□□ 0.03
SMPDL3A-201ENST00000368440 SCNN1BP51168 640 aa15.26■□□□□ 0.03
SMPDL3A-201ENST00000368440 RAD51Q06609 339 aa15.26■□□□□ 0.03
SMPDL3A-201ENST00000368440 PPIDQ08752 370 aaKnown RBP15.26■□□□□ 0.03
SMPDL3A-201ENST00000368440 ZNF805Q5CZA5 627 aa15.26■□□□□ 0.03
SMPDL3A-201ENST00000368440 LRRC73Q5JTD7 316 aa15.26■□□□□ 0.03
SMPDL3A-201ENST00000368440 KIAA0895LQ68EN5 471 aa15.26■□□□□ 0.03
SMPDL3A-201ENST00000368440 CAMK1DQ8IU85 385 aa15.26■□□□□ 0.03
SMPDL3A-201ENST00000368440 RGL4Q8IZJ4 473 aa15.26■□□□□ 0.03
SMPDL3A-201ENST00000368440 SNX19Q92543 992 aa15.26■□□□□ 0.03
SMPDL3A-201ENST00000368440 FOXJ1Q92949 421 aa15.26■□□□□ 0.03
SMPDL3A-201ENST00000368440 HES6Q96HZ4 224 aa15.26■□□□□ 0.03
SMPDL3A-201ENST00000368440 MGME1Q9BQP7 344 aa15.26■□□□□ 0.03
SMPDL3A-201ENST00000368440 OSBPL1AQ9BXW6 950 aa15.26■□□□□ 0.03
SMPDL3A-201ENST00000368440 CPEB1Q9BZB8 566 aaKnown RBP15.26■□□□□ 0.03
SMPDL3A-201ENST00000368440 EBF2Q9HAK2 575 aa15.26■□□□□ 0.03
SMPDL3A-201ENST00000368440 NT5MQ9NPB1 228 aa15.26■□□□□ 0.03
SMPDL3A-201ENST00000368440 SEMA4GQ9NTN9 838 aa15.26■□□□□ 0.03
SMPDL3A-201ENST00000368440 ADAMTS9Q9P2N4 1935 aa15.26■□□□□ 0.03
SMPDL3A-201ENST00000368440 LRRC72A6NJI9 287 aa15.25■□□□□ 0.03
SMPDL3A-201ENST00000368440 C16orf96A6NNT2 1141 aa15.25■□□□□ 0.03
SMPDL3A-201ENST00000368440 MIF4GDA9UHW6 222 aaKnown RBP15.25■□□□□ 0.03
SMPDL3A-201ENST00000368440 KCNK1O00180 336 aa15.25■□□□□ 0.03
SMPDL3A-201ENST00000368440 ADRB3P13945 408 aa15.25■□□□□ 0.03
SMPDL3A-201ENST00000368440 HOXD11P31277 338 aaPredicted RBP15.25■□□□□ 0.03
SMPDL3A-201ENST00000368440 CSNK1DP48730 415 aa15.25■□□□□ 0.03
SMPDL3A-201ENST00000368440 NEK3P51956 506 aa15.25■□□□□ 0.03
SMPDL3A-201ENST00000368440 HNRNPDQ14103 355 aaKnown RBP15.25■□□□□ 0.03
SMPDL3A-201ENST00000368440 SF3A2Q15428 464 aaKnown RBP15.25■□□□□ 0.03
SMPDL3A-201ENST00000368440 PEAR1Q5VY43 1037 aaPredicted RBP15.25■□□□□ 0.03
SMPDL3A-201ENST00000368440 TIGD7Q6NT04 549 aaPredicted RBP15.25■□□□□ 0.03
SMPDL3A-201ENST00000368440 SYT10Q6XYQ8 523 aa15.25■□□□□ 0.03
SMPDL3A-201ENST00000368440 ZSWIM9Q86XI8 627 aa15.25■□□□□ 0.03
SMPDL3A-201ENST00000368440 SYT12Q8IV01 421 aa15.25■□□□□ 0.03
SMPDL3A-201ENST00000368440 CCDC13Q8IYE1 715 aa15.25■□□□□ 0.03
SMPDL3A-201ENST00000368440 NSMCE1Q8WV22 266 aa15.25■□□□□ 0.03
SMPDL3A-201ENST00000368440 DNASE2BQ8WZ79 361 aa15.25■□□□□ 0.03
SMPDL3A-201ENST00000368440 ORAI3Q9BRQ5 295 aa15.25■□□□□ 0.03
SMPDL3A-201ENST00000368440 PCED1AQ9H1Q7 454 aa15.25■□□□□ 0.03
SMPDL3A-201ENST00000368440 EIF2B4Q9UI10 523 aaKnown RBP15.25■□□□□ 0.03
SMPDL3A-201ENST00000368440 GGT7Q9UJ14 662 aa15.25■□□□□ 0.03
SMPDL3A-201ENST00000368440 TBC1D3DA0A087WVF3 549 aa15.25■□□□□ 0.03
SMPDL3A-201ENST00000368440 TBC1D3IA0A087WXS9 549 aa15.25■□□□□ 0.03
SMPDL3A-201ENST00000368440 TBC1D3EA0A087X179 549 aa15.25■□□□□ 0.03
SMPDL3A-201ENST00000368440 TBC1D3KA0A087X1G2 549 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms