RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 ZSCAN5CA6NGD5 496 aaPredicted RBP16.26■□□□□ 0.19
CKS1B-202ENST00000368436 H3BM21 787 aa16.26■□□□□ 0.19
CKS1B-202ENST00000368436 KRIT1O00522 736 aa16.26■□□□□ 0.19
CKS1B-202ENST00000368436 AREL1O15033 823 aa16.26■□□□□ 0.19
CKS1B-202ENST00000368436 LZTS3O60299 673 aaPredicted RBP16.26■□□□□ 0.19
CKS1B-202ENST00000368436 RAMP2O60895 175 aa16.26■□□□□ 0.19
CKS1B-202ENST00000368436 NEBLO76041 1014 aa16.26■□□□□ 0.19
CKS1B-202ENST00000368436 KRT3P12035 628 aa16.26■□□□□ 0.19
CKS1B-202ENST00000368436 STAT1P42224 750 aa16.26■□□□□ 0.19
CKS1B-202ENST00000368436 TPRG1LQ5T0D9 272 aa16.26■□□□□ 0.19
CKS1B-202ENST00000368436 ZCCHC8Q6NZY4 707 aaKnown RBP16.26■□□□□ 0.19
CKS1B-202ENST00000368436 PHF13Q86YI8 300 aaPredicted RBP16.26■□□□□ 0.19
CKS1B-202ENST00000368436 RYBPQ8N488 228 aaPredicted RBP16.26■□□□□ 0.19
CKS1B-202ENST00000368436 CENPTQ96BT3 561 aa16.26■□□□□ 0.19
CKS1B-202ENST00000368436 ARHGEF26Q96DR7 871 aa16.26■□□□□ 0.19
CKS1B-202ENST00000368436 NOL6Q9H6R4 1146 aaKnown RBP16.26■□□□□ 0.19
CKS1B-202ENST00000368436 EVA1BQ9NVM1 165 aa16.26■□□□□ 0.19
CKS1B-202ENST00000368436 ADAM22Q9P0K1 906 aa16.26■□□□□ 0.19
CKS1B-202ENST00000368436 IPO11Q9UI26 975 aaKnown RBP16.26■□□□□ 0.19
CKS1B-202ENST00000368436 GGT7Q9UJ14 662 aa16.26■□□□□ 0.19
CKS1B-202ENST00000368436 ITM2BQ9Y287 266 aa16.26■□□□□ 0.19
CKS1B-202ENST00000368436 PTPRQQ9UMZ3 2332 aa16.25■□□□□ 0.19
CKS1B-202ENST00000368436 LRRK1Q38SD2 2015 aa16.25■□□□□ 0.19
CKS1B-202ENST00000368436 NEMP1O14524 444 aa16.25■□□□□ 0.19
CKS1B-202ENST00000368436 RIOK3O14730 519 aaKnown RBP16.25■□□□□ 0.19
CKS1B-202ENST00000368436 UGT2B4P06133 528 aa16.25■□□□□ 0.19
CKS1B-202ENST00000368436 GPD1P21695 349 aa16.25■□□□□ 0.19
CKS1B-202ENST00000368436 EIF2B5Q13144 721 aaKnown RBP16.25■□□□□ 0.19
CKS1B-202ENST00000368436 PDE1CQ14123 709 aaPredicted RBP16.25■□□□□ 0.19
CKS1B-202ENST00000368436 CLEC16AQ2KHT3 1053 aa16.25■□□□□ 0.19
CKS1B-202ENST00000368436 FKBP15Q5T1M5 1219 aa16.25■□□□□ 0.19
CKS1B-202ENST00000368436 WDR59Q6PJI9 974 aa16.25■□□□□ 0.19
CKS1B-202ENST00000368436 GDPD4Q6W3E5 623 aa16.25■□□□□ 0.19
CKS1B-202ENST00000368436 LEKR1Q6ZMV7 388 aa16.25■□□□□ 0.19
CKS1B-202ENST00000368436 CASKIN2Q8WXE0 1202 aa16.25■□□□□ 0.19
CKS1B-202ENST00000368436 KLHL32Q96NJ5 620 aa16.25■□□□□ 0.19
CKS1B-202ENST00000368436 DEPDC7Q96QD5 511 aa16.25■□□□□ 0.19
CKS1B-202ENST00000368436 SALL4Q9UJQ4 1053 aa16.25■□□□□ 0.19
CKS1B-202ENST00000368436 TCRBV5S1A1TA0A578 114 aa16.24■□□□□ 0.19
CKS1B-202ENST00000368436 SIGLEC16A6NMB1 481 aa16.24■□□□□ 0.19
CKS1B-202ENST00000368436 TPP1O14773 563 aa16.24■□□□□ 0.19
CKS1B-202ENST00000368436 AQP9O43315 295 aa16.24■□□□□ 0.19
CKS1B-202ENST00000368436 DXOO77932 396 aaKnown RBP16.24■□□□□ 0.19
CKS1B-202ENST00000368436 TPM2P07951 284 aa16.24■□□□□ 0.19
CKS1B-202ENST00000368436 JUNDP17535 347 aa16.24■□□□□ 0.19
CKS1B-202ENST00000368436 NSFP46459 744 aaKnown RBP16.24■□□□□ 0.19
CKS1B-202ENST00000368436 YBEYP58557 167 aaPredicted RBP16.24■□□□□ 0.19
CKS1B-202ENST00000368436 INO80DQ53TQ3 878 aaPredicted RBP16.24■□□□□ 0.19
CKS1B-202ENST00000368436 ATXN7L2Q5T6C5 722 aaPredicted RBP16.24■□□□□ 0.19
CKS1B-202ENST00000368436 CLEC17AQ6ZS10 378 aa16.24■□□□□ 0.19
CKS1B-202ENST00000368436 SLFN11Q7Z7L1 901 aa16.24■□□□□ 0.19
CKS1B-202ENST00000368436 TTC7BQ86TV6 843 aa16.24■□□□□ 0.19
CKS1B-202ENST00000368436 RTL3Q8N8U3 475 aaKnown RBP16.24■□□□□ 0.19
CKS1B-202ENST00000368436 C3orf20Q8ND61 904 aa16.24■□□□□ 0.19
CKS1B-202ENST00000368436 IFI44Q8TCB0 444 aa16.24■□□□□ 0.19
CKS1B-202ENST00000368436 BTN2A2Q8WVV5 523 aa16.24■□□□□ 0.19
CKS1B-202ENST00000368436 GDAP1L1Q96MZ0 367 aa16.24■□□□□ 0.19
CKS1B-202ENST00000368436 ZNF578Q96N58 590 aaPredicted RBP16.24■□□□□ 0.19
CKS1B-202ENST00000368436 SELENOOQ9BVL4 669 aa16.24■□□□□ 0.19
CKS1B-202ENST00000368436 TTYH3Q9C0H2 523 aa16.24■□□□□ 0.19
CKS1B-202ENST00000368436 LMBRD1Q9NUN5 540 aa16.24■□□□□ 0.19
CKS1B-202ENST00000368436 FANCLQ9NW38 375 aa16.24■□□□□ 0.19
CKS1B-202ENST00000368436 NCKIPSDQ9NZQ3 722 aa16.24■□□□□ 0.19
CKS1B-202ENST00000368436 MFHAS1Q9Y4C4 1052 aa16.24■□□□□ 0.19
CKS1B-202ENST00000368436 EME2A4GXA9 379 aaPredicted RBP16.23■□□□□ 0.19
CKS1B-202ENST00000368436 EIF4E1BA6NMX2 242 aaKnown RBP16.23■□□□□ 0.19
CKS1B-202ENST00000368436 WASH4PA8MWX3 477 aa16.23■□□□□ 0.19
CKS1B-202ENST00000368436 TK2O00142 265 aa16.23■□□□□ 0.19
CKS1B-202ENST00000368436 ATXN7O15265 892 aaPredicted RBP16.23■□□□□ 0.19
CKS1B-202ENST00000368436 BUB1O43683 1085 aa16.23■□□□□ 0.19
CKS1B-202ENST00000368436 CSO75390 466 aaKnown RBP16.23■□□□□ 0.19
CKS1B-202ENST00000368436 TMCC1O94876 653 aa16.23■□□□□ 0.19
CKS1B-202ENST00000368436 CALB1P05937 261 aa16.23■□□□□ 0.19
CKS1B-202ENST00000368436 LSSP48449 732 aa16.23■□□□□ 0.19
CKS1B-202ENST00000368436 COPB1P53618 953 aaKnown RBP16.23■□□□□ 0.19
CKS1B-202ENST00000368436 YPEL5P62699 121 aa16.23■□□□□ 0.19
CKS1B-202ENST00000368436 TLE3Q04726 772 aa16.23■□□□□ 0.19
CKS1B-202ENST00000368436 SYCP1Q15431 976 aa16.23■□□□□ 0.19
CKS1B-202ENST00000368436 RBM43Q6ZSC3 357 aaKnown RBP16.23■□□□□ 0.19
CKS1B-202ENST00000368436 LSMEM2Q8N112 164 aa16.23■□□□□ 0.19
CKS1B-202ENST00000368436 PYROXD2Q8N2H3 581 aa16.23■□□□□ 0.19
CKS1B-202ENST00000368436 HIC2Q96JB3 615 aa16.23■□□□□ 0.19
CKS1B-202ENST00000368436 TBATAQ96M53 351 aa16.23■□□□□ 0.19
CKS1B-202ENST00000368436 KLC2Q9H0B6 622 aa16.23■□□□□ 0.19
CKS1B-202ENST00000368436 ABCG4Q9H172 646 aa16.23■□□□□ 0.19
CKS1B-202ENST00000368436 DKK3Q9UBP4 350 aa16.23■□□□□ 0.19
CKS1B-202ENST00000368436 LIMA1Q9UHB6 759 aaKnown RBP16.23■□□□□ 0.19
CKS1B-202ENST00000368436 TOR1BO14657 336 aa16.22■□□□□ 0.19
CKS1B-202ENST00000368436 CCP110O43303 1012 aa16.22■□□□□ 0.19
CKS1B-202ENST00000368436 MMP20O60882 483 aa16.22■□□□□ 0.19
CKS1B-202ENST00000368436 USP12O75317 370 aa16.22■□□□□ 0.19
CKS1B-202ENST00000368436 TM7SF2O76062 418 aa16.22■□□□□ 0.19
CKS1B-202ENST00000368436 IGSF6O95976 241 aa16.22■□□□□ 0.19
CKS1B-202ENST00000368436 MPOP05164 745 aa16.22■□□□□ 0.19
CKS1B-202ENST00000368436 TIMP2P16035 220 aa16.22■□□□□ 0.19
CKS1B-202ENST00000368436 EPHB2P29323 1055 aa16.22■□□□□ 0.19
CKS1B-202ENST00000368436 IGFALSP35858 605 aa16.22■□□□□ 0.19
CKS1B-202ENST00000368436 ZNF143P52747 638 aaPredicted RBP16.22■□□□□ 0.19
CKS1B-202ENST00000368436 AIF1P55008 147 aa16.22■□□□□ 0.19
CKS1B-202ENST00000368436 RAD51Q06609 339 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms