RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 LIG3P49916 1009 aa8.38□□□□□ -1.07
SSR2-202ENST00000368311 INHBCP55103 352 aa8.38□□□□□ -1.07
SSR2-202ENST00000368311 DOK6Q6PKX4 331 aa8.38□□□□□ -1.07
SSR2-202ENST00000368311 GDPD4Q6W3E5 623 aa8.38□□□□□ -1.07
SSR2-202ENST00000368311 TFAP2DQ7Z6R9 452 aa8.38□□□□□ -1.07
SSR2-202ENST00000368311 ADAMTS18Q8TE60 1221 aa8.38□□□□□ -1.07
SSR2-202ENST00000368311 DQX1Q8TE96 717 aaKnown RBP8.38□□□□□ -1.07
SSR2-202ENST00000368311 ASZ1Q8WWH4 475 aa8.38□□□□□ -1.07
SSR2-202ENST00000368311 FERD3LQ96RJ6 166 aa8.38□□□□□ -1.07
SSR2-202ENST00000368311 COPS8Q99627 209 aa8.38□□□□□ -1.07
SSR2-202ENST00000368311 SPTLC3Q9NUV7 552 aa8.38□□□□□ -1.07
SSR2-202ENST00000368311 FGFR1OP2Q9NVK5 253 aa8.38□□□□□ -1.07
SSR2-202ENST00000368311 FBXL12Q9NXK8 326 aa8.38□□□□□ -1.07
SSR2-202ENST00000368311 RPS6KB2Q9UBS0 482 aa8.38□□□□□ -1.07
SSR2-202ENST00000368311 NCANO14594 1321 aa8.38□□□□□ -1.07
SSR2-202ENST00000368311 GPR89AB7ZAQ6 455 aa8.38□□□□□ -1.07
SSR2-202ENST00000368311 ADRB2P07550 413 aa8.38□□□□□ -1.07
SSR2-202ENST00000368311 GPR89BP0CG08 455 aa8.38□□□□□ -1.07
SSR2-202ENST00000368311 PYGBP11216 843 aa8.38□□□□□ -1.07
SSR2-202ENST00000368311 PPP2R1BP30154 601 aa8.38□□□□□ -1.07
SSR2-202ENST00000368311 PPARDQ03181 441 aa8.38□□□□□ -1.07
SSR2-202ENST00000368311 PDIA2Q13087 525 aaKnown RBP8.38□□□□□ -1.07
SSR2-202ENST00000368311 NR1I3Q14994 352 aa8.38□□□□□ -1.07
SSR2-202ENST00000368311 CBWD3Q5JTY5 395 aa8.38□□□□□ -1.07
SSR2-202ENST00000368311 CBWD5Q5RIA9 395 aa8.38□□□□□ -1.07
SSR2-202ENST00000368311 GKAP1Q5VSY0 366 aaPredicted RBP8.38□□□□□ -1.07
SSR2-202ENST00000368311 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.38□□□□□ -1.07
SSR2-202ENST00000368311 VSIG1Q86XK7 387 aa8.38□□□□□ -1.07
SSR2-202ENST00000368311 MRPL48Q96GC5 212 aaKnown RBP8.38□□□□□ -1.07
SSR2-202ENST00000368311 C1orf74Q96LT6 269 aa8.38□□□□□ -1.07
SSR2-202ENST00000368311 SLC29A3Q9BZD2 475 aa8.38□□□□□ -1.07
SSR2-202ENST00000368311 RNF112Q9ULX5 631 aa8.38□□□□□ -1.07
SSR2-202ENST00000368311 ARFGEF1Q9Y6D6 1849 aa8.38□□□□□ -1.07
SSR2-202ENST00000368311 SIPA1L3O60292 1781 aaPredicted RBP8.38□□□□□ -1.07
SSR2-202ENST00000368311 MYH1P12882 1939 aa8.38□□□□□ -1.07
SSR2-202ENST00000368311 TRAFD1O14545 582 aaPredicted RBP8.38□□□□□ -1.07
SSR2-202ENST00000368311 GTF2E2P29084 291 aaKnown RBP8.38□□□□□ -1.07
SSR2-202ENST00000368311 PBLDP30039 288 aaPredicted RBP8.38□□□□□ -1.07
SSR2-202ENST00000368311 FAM189BP81408 668 aa8.38□□□□□ -1.07
SSR2-202ENST00000368311 CDK18Q07002 472 aa8.38□□□□□ -1.07
SSR2-202ENST00000368311 MORF4L2Q15014 288 aa8.38□□□□□ -1.07
SSR2-202ENST00000368311 LRRC14Q15048 493 aa8.38□□□□□ -1.07
SSR2-202ENST00000368311 SH3RF1Q7Z6J0 888 aa8.38□□□□□ -1.07
SSR2-202ENST00000368311 NAT16Q8N8M0 369 aa8.38□□□□□ -1.07
SSR2-202ENST00000368311 FAM71BQ8TC56 605 aa8.38□□□□□ -1.07
SSR2-202ENST00000368311 TBC1D17Q9HA65 648 aa8.38□□□□□ -1.07
SSR2-202ENST00000368311 TNFRSF10AO00220 468 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 CLDN4O14493 209 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 MDM4O15151 490 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 ALPPP05187 535 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 APRTP07741 180 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 CCINQ13939 588 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 PTPN21Q16825 1174 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 LONRF1Q17RB8 773 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 MPP7Q5T2T1 576 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 FAM45BPQ6NSW5 357 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 POTEHQ6S545 545 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 CCDC121Q6ZUS5 278 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 DSELQ8IZU8 1212 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 KDM1BQ8NB78 822 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 CDC26Q8NHZ8 85 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 FAM45AQ8TCE6 357 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 PCDHGB3Q9Y5G1 929 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 A0A1B0GTW7 788 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 C5orf60A6NFR6 353 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 PRAMEF26H0Y7S4 382 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 CD2BP2O95400 341 aaKnown RBP8.37□□□□□ -1.07
SSR2-202ENST00000368311 TYRP14679 529 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 CASP4P49662 377 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 PLTPP55058 493 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 RBPJQ06330 500 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 CACNG1Q06432 222 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 GPR33Q49SQ1 333 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 PPP1R26Q5T8A7 1209 aaPredicted RBP8.37□□□□□ -1.07
SSR2-202ENST00000368311 FBXO38Q6PIJ6 1188 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 RRM2BQ7LG56 351 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 ARID3BQ8IVW6 561 aaPredicted RBP8.37□□□□□ -1.07
SSR2-202ENST00000368311 RAVER1Q8IY67 606 aaKnown RBP8.37□□□□□ -1.07
SSR2-202ENST00000368311 TTYH1Q9H313 450 aaPredicted RBP8.37□□□□□ -1.07
SSR2-202ENST00000368311 FAM83DQ9H4H8 585 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 MFHAS1Q9Y4C4 1052 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 WDR27A2RRH5 827 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 TM9SF1O15321 606 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 SOCS5O75159 536 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 COMTP21964 271 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 NTSP30990 170 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 GRIA4P48058 902 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 KRT72Q14CN4 511 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 DBN1Q16643 649 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 TCHHL1Q5QJ38 904 aaPredicted RBP8.37□□□□□ -1.07
SSR2-202ENST00000368311 ATAD3BQ5T9A4 648 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 SLC8B1Q6J4K2 584 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 RASGRP2Q7LDG7 609 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 SCUBE3Q8IX30 993 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 GALNT15Q8N3T1 639 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 ELMO1Q92556 727 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 EXT2Q93063 718 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 MCUR1Q96AQ8 359 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 VPS11Q9H270 941 aa8.37□□□□□ -1.07
SSR2-202ENST00000368311 PCDH9Q9HC56 1237 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms