RNA–Protein interactions for RNA: ENST00000368045.3

CD48-201, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-201ENST00000368045 ABCC13Q9NSE7 274 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 ST3GAL5Q9UNP4 418 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 INPP5FQ9Y2H2 1132 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 ARHGEF37A1IGU5 675 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 MEIS3P2A8K0S8 358 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 BCAS2O75934 225 aaPredicted RBP14.45□□□□□ -0.1
CD48-201ENST00000368045 CCR1P32246 355 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 AVPR1AP37288 418 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 SLC1A2P43004 574 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 HSPA13P48723 471 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 MPP1Q00013 466 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 PURAQ00577 322 aaKnown RBP14.45□□□□□ -0.1
CD48-201ENST00000368045 FOLH1Q04609 750 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 ADGRE1Q14246 886 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 PPP2R5DQ14738 602 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 TIGD5Q53EQ6 642 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 PPM1LQ5SGD2 360 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 TSTD2Q5T7W7 516 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 THEMIS2Q5TEJ8 643 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 RANBP10Q6VN20 620 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 CTU1Q7Z7A3 348 aaKnown RBP14.45□□□□□ -0.1
CD48-201ENST00000368045 GALNT7Q86SF2 657 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 CEP97Q8IW35 865 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 MFSD6LQ8IWD5 586 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 DENND6AQ8IWF6 608 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 EFCAB3Q8N7B9 438 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 CCNYL1Q8N7R7 359 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 FATE1Q969F0 183 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 LENG1Q96BZ8 264 aaPredicted RBP14.45□□□□□ -0.1
CD48-201ENST00000368045 TSPAN17Q96FV3 270 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 LRGUKQ96M69 825 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 CATSPER2Q96P56 530 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 SPATA16Q9BXB7 569 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 FSD1LQ9BXM9 530 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 TRIM4Q9C037 500 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 SMOC2Q9H3U7 446 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 EPB41L1Q9H4G0 881 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 PIDD1Q9HB75 910 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 ARNT2Q9HBZ2 717 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 EML4Q9HC35 981 aaKnown RBP14.45□□□□□ -0.1
CD48-201ENST00000368045 MIOSQ9NXC5 875 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 CACNG4Q9UBN1 327 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 FBXO5Q9UKT4 447 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 RAB26Q9ULW5 256 aa14.45□□□□□ -0.1
CD48-201ENST00000368045 COPG1Q9Y678 874 aaKnown RBP14.45□□□□□ -0.1
CD48-201ENST00000368045 FNDC1Q4ZHG4 1894 aaPredicted RBP14.44□□□□□ -0.1
CD48-201ENST00000368045 IQCA1LA6NCM1 817 aa14.44□□□□□ -0.1
CD48-201ENST00000368045 WASH4PA8MWX3 477 aa14.44□□□□□ -0.1
CD48-201ENST00000368045 SDHDO14521 159 aa14.44□□□□□ -0.1
CD48-201ENST00000368045 MT-CYBP00156 380 aaPredicted RBP14.44□□□□□ -0.1
CD48-201ENST00000368045 RPLP2P05387 115 aaKnown RBP14.44□□□□□ -0.1
CD48-201ENST00000368045 PABPC4LP0CB38 370 aaKnown RBP14.44□□□□□ -0.1
CD48-201ENST00000368045 BDNFP23560 247 aa14.44□□□□□ -0.1
CD48-201ENST00000368045 CCR10P46092 362 aa14.44□□□□□ -0.1
CD48-201ENST00000368045 PSMD8P48556 350 aa14.44□□□□□ -0.1
CD48-201ENST00000368045 CLCN5P51795 746 aa14.44□□□□□ -0.1
CD48-201ENST00000368045 TAS2R39P59534 338 aa14.44□□□□□ -0.1
CD48-201ENST00000368045 BEX3Q00994 111 aa14.44□□□□□ -0.1
CD48-201ENST00000368045 DLG1Q12959 904 aa14.44□□□□□ -0.1
CD48-201ENST00000368045 CTBP1Q13363 440 aa14.44□□□□□ -0.1
CD48-201ENST00000368045 FSCN1Q16658 493 aaKnown RBP14.44□□□□□ -0.1
CD48-201ENST00000368045 FAM83EQ2M2I3 478 aa14.44□□□□□ -0.1
CD48-201ENST00000368045 C11orf91Q3C1V1 193 aa14.44□□□□□ -0.1
CD48-201ENST00000368045 NEPROQ6NW34 567 aa14.44□□□□□ -0.1
CD48-201ENST00000368045 UGT2A3Q6UWM9 527 aa14.44□□□□□ -0.1
CD48-201ENST00000368045 ARHGAP36Q6ZRI8 547 aa14.44□□□□□ -0.1
CD48-201ENST00000368045 CHSY3Q70JA7 882 aa14.44□□□□□ -0.1
CD48-201ENST00000368045 TOP1MTQ969P6 601 aa14.44□□□□□ -0.1
CD48-201ENST00000368045 DCUN1D1Q96GG9 259 aa14.44□□□□□ -0.1
CD48-201ENST00000368045 RANBP9Q96S59 729 aa14.44□□□□□ -0.1
CD48-201ENST00000368045 RHOBTB2Q9BYZ6 727 aa14.44□□□□□ -0.1
CD48-201ENST00000368045 SLC39A8Q9C0K1 460 aa14.44□□□□□ -0.1
CD48-201ENST00000368045 RBM22Q9NW64 420 aaKnown RBP eCLIP14.44□□□□□ -0.1
CD48-201ENST00000368045 SMIM31A0A1B0GVY4 71 aa14.43□□□□□ -0.1
CD48-201ENST00000368045 HEATR9A2RTY3 570 aa14.43□□□□□ -0.1
CD48-201ENST00000368045 PAGE1O75459 146 aa14.43□□□□□ -0.1
CD48-201ENST00000368045 PAPSS2O95340 614 aaPredicted RBP14.43□□□□□ -0.1
CD48-201ENST00000368045 CAPNS1P04632 268 aa14.43□□□□□ -0.1
CD48-201ENST00000368045 CPB1P15086 417 aa14.43□□□□□ -0.1
CD48-201ENST00000368045 XRCC1P18887 633 aaPredicted RBP14.43□□□□□ -0.1
CD48-201ENST00000368045 RAB27AP51159 221 aa14.43□□□□□ -0.1
CD48-201ENST00000368045 SCNN1GP51170 649 aa14.43□□□□□ -0.1
CD48-201ENST00000368045 PFKPQ01813 784 aa14.43□□□□□ -0.1
CD48-201ENST00000368045 GALNT1Q10472 559 aaPredicted RBP14.43□□□□□ -0.1
CD48-201ENST00000368045 DYNC1I2Q13409 638 aaKnown RBP14.43□□□□□ -0.1
CD48-201ENST00000368045 CEACAM7Q14002 265 aa14.43□□□□□ -0.1
CD48-201ENST00000368045 CNGA3Q16281 694 aa14.43□□□□□ -0.1
CD48-201ENST00000368045 PDCD2Q16342 344 aaPredicted RBP14.43□□□□□ -0.1
CD48-201ENST00000368045 RASIP1Q5U651 963 aa14.43□□□□□ -0.1
CD48-201ENST00000368045 AGAP9Q5VTM2 703 aa14.43□□□□□ -0.1
CD48-201ENST00000368045 SPRYD7Q5W111 196 aa14.43□□□□□ -0.1
CD48-201ENST00000368045 ZNF470Q6ECI4 717 aa14.43□□□□□ -0.1
CD48-201ENST00000368045 KLC3Q6P597 504 aa14.43□□□□□ -0.1
CD48-201ENST00000368045 AGMOQ6ZNB7 445 aa14.43□□□□□ -0.1
CD48-201ENST00000368045 TRIM67Q6ZTA4 783 aa14.43□□□□□ -0.1
CD48-201ENST00000368045 TICAM1Q8IUC6 712 aa14.43□□□□□ -0.1
CD48-201ENST00000368045 PELI3Q8N2H9 469 aa14.43□□□□□ -0.1
CD48-201ENST00000368045 RTL3Q8N8U3 475 aaKnown RBP14.43□□□□□ -0.1
CD48-201ENST00000368045 TXNDC5Q8NBS9 432 aaKnown RBP14.43□□□□□ -0.1
CD48-201ENST00000368045 FTHL17Q9BXU8 183 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms