RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 TAF11Q15544 211 aa4.51□□□□□ -1.69
RNU6-560P-201ENST00000364007 TSTQ16762 297 aaKnown RBP4.51□□□□□ -1.69
RNU6-560P-201ENST00000364007 DUSP6Q16828 381 aa4.51□□□□□ -1.69
RNU6-560P-201ENST00000364007 LEXMQ3ZCV2 418 aa4.51□□□□□ -1.69
RNU6-560P-201ENST00000364007 SERTAD4-AS1Q5TG53 156 aa4.51□□□□□ -1.69
RNU6-560P-201ENST00000364007 ATG9BQ674R7 924 aa4.51□□□□□ -1.69
RNU6-560P-201ENST00000364007 TRAPPC11Q7Z392 1133 aa4.51□□□□□ -1.69
RNU6-560P-201ENST00000364007 PIM3Q86V86 326 aa4.51□□□□□ -1.69
RNU6-560P-201ENST00000364007 KIAA2013Q8IYS2 634 aa4.51□□□□□ -1.69
RNU6-560P-201ENST00000364007 CNTROBQ8N137 903 aa4.51□□□□□ -1.69
RNU6-560P-201ENST00000364007 MCPH1Q8NEM0 835 aa4.51□□□□□ -1.69
RNU6-560P-201ENST00000364007 NFKBIDQ8NI38 313 aa4.51□□□□□ -1.69
RNU6-560P-201ENST00000364007 LPAR1Q92633 364 aa4.51□□□□□ -1.69
RNU6-560P-201ENST00000364007 URB1-AS1Q96HZ7 61 aa4.51□□□□□ -1.69
RNU6-560P-201ENST00000364007 NUF2Q9BZD4 464 aa4.51□□□□□ -1.69
RNU6-560P-201ENST00000364007 GLIS2Q9BZE0 524 aaPredicted RBP4.51□□□□□ -1.69
RNU6-560P-201ENST00000364007 UNC45AQ9H3U1 944 aa4.51□□□□□ -1.69
RNU6-560P-201ENST00000364007 RUSC2Q8N2Y8 1516 aa4.51□□□□□ -1.69
RNU6-560P-201ENST00000364007 GAGE12JA6NER3 117 aa4.5□□□□□ -1.69
RNU6-560P-201ENST00000364007 HOXB2P14652 356 aa4.5□□□□□ -1.69
RNU6-560P-201ENST00000364007 SRD5A1P18405 259 aa4.5□□□□□ -1.69
RNU6-560P-201ENST00000364007 RYKP34925 604 aa4.5□□□□□ -1.69
RNU6-560P-201ENST00000364007 DDIT3P35638 169 aa4.5□□□□□ -1.69
RNU6-560P-201ENST00000364007 THPOP40225 353 aa4.5□□□□□ -1.69
RNU6-560P-201ENST00000364007 RGS2P41220 211 aa4.5□□□□□ -1.69
RNU6-560P-201ENST00000364007 GPR12P47775 334 aa4.5□□□□□ -1.69
RNU6-560P-201ENST00000364007 P2RX3P56373 397 aa4.5□□□□□ -1.69
RNU6-560P-201ENST00000364007 YWHAZP63104 245 aaKnown RBP4.5□□□□□ -1.69
RNU6-560P-201ENST00000364007 DCAF12L2Q5VW00 463 aa4.5□□□□□ -1.69
RNU6-560P-201ENST00000364007 CES5AQ6NT32 575 aa4.5□□□□□ -1.69
RNU6-560P-201ENST00000364007 ZNF367Q7RTV3 350 aa4.5□□□□□ -1.69
RNU6-560P-201ENST00000364007 RBFAQ8N0V3 343 aa4.5□□□□□ -1.69
RNU6-560P-201ENST00000364007 C11orf65Q8NCR3 313 aa4.5□□□□□ -1.69
RNU6-560P-201ENST00000364007 C7orf57Q8NEG2 295 aa4.5□□□□□ -1.69
RNU6-560P-201ENST00000364007 ZMIZ2Q8NF64 920 aa4.5□□□□□ -1.69
RNU6-560P-201ENST00000364007 GPT2Q8TD30 523 aa4.5□□□□□ -1.69
RNU6-560P-201ENST00000364007 UCMAQ8WVF2 138 aa4.5□□□□□ -1.69
RNU6-560P-201ENST00000364007 SMG7Q92540 1137 aaKnown RBP4.5□□□□□ -1.69
RNU6-560P-201ENST00000364007 RNF183Q96D59 192 aa4.5□□□□□ -1.69
RNU6-560P-201ENST00000364007 VCPIP1Q96JH7 1222 aa4.5□□□□□ -1.69
RNU6-560P-201ENST00000364007 NR1H4Q96RI1 486 aaPredicted RBP4.5□□□□□ -1.69
RNU6-560P-201ENST00000364007 MAF1Q9H063 256 aa4.5□□□□□ -1.69
RNU6-560P-201ENST00000364007 AASSQ9UDR5 926 aa4.5□□□□□ -1.69
RNU6-560P-201ENST00000364007 KDM3AQ9Y4C1 1321 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 KAT6BQ8WYB5 2073 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 TYW5A2RUC4 315 aaKnown RBP4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 KLRF2D3W0D1 207 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 H3BNX3 289 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 SNAP23O00161 211 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 EBAG9O00559 213 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 TGFB1I1O43294 461 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 ATP2C2O75185 946 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 HEXAP06865 529 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 MYZAPP0CAP1 466 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 ARSBP15848 533 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 PTGER1P34995 402 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 RASSF2P50749 326 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 CCR9P51686 369 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 NEXNQ0ZGT2 675 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 RUNX2Q13950 521 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 LPIN1Q14693 890 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 VEPH1Q14D04 833 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 ZNF284Q2VY69 593 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 PLEKHO1Q53GL0 409 aaPredicted RBP4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 PRAMEF19Q5SWL8 479 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 LRRC8EQ6NSJ5 796 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 FAM180BQ6P0A1 224 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 INO80CQ6PI98 192 aaPredicted RBP4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 ATF7IPQ6VMQ6 1270 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 Q6ZSV7 163 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 Q6ZTK2 550 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 RSRC2Q7L4I2 434 aaKnown RBP4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 RRM2BQ7LG56 351 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 TBC1D26Q86UD7 250 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 TEX45Q8NA69 505 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 TDRD7Q8NHU6 1098 aaKnown RBP4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 METTL6Q8TCB7 284 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 BICD2Q8TD16 824 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 NOC3LQ8WTT2 800 aaKnown RBP4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 SLC35F5Q8WV83 523 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 TMEM18Q96B42 140 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 KLHL29Q96CT2 875 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 HMCESQ96FZ2 354 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 APOLD1Q96LR9 279 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 SPATS2LQ9NUQ6 558 aaKnown RBP4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 TAS2R10Q9NYW0 307 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 NDRG3Q9UGV2 375 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 PNMA2Q9UL42 364 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 RAI2Q9Y5P3 530 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 SQORQ9Y6N5 450 aa4.49□□□□□ -1.69
RNU6-560P-201ENST00000364007 NPIPB15A6NHN6 443 aaPredicted RBP4.48□□□□□ -1.69
RNU6-560P-201ENST00000364007 HSPB2A8KAH6 182 aa4.48□□□□□ -1.69
RNU6-560P-201ENST00000364007 TNFRSF13BO14836 293 aaPredicted RBP4.48□□□□□ -1.69
RNU6-560P-201ENST00000364007 LDB2O43679 373 aa4.48□□□□□ -1.69
RNU6-560P-201ENST00000364007 SEC31AO94979 1220 aaKnown RBP4.48□□□□□ -1.69
RNU6-560P-201ENST00000364007 CYP1A2P05177 515 aa4.48□□□□□ -1.69
RNU6-560P-201ENST00000364007 PTPN2P17706 415 aa4.48□□□□□ -1.69
RNU6-560P-201ENST00000364007 POU1F1P28069 291 aa4.48□□□□□ -1.69
RNU6-560P-201ENST00000364007 DCTDP32321 178 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms