RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 STAT4Q14765 748 aa16.97■□□□□ 0.31
PDLIM7-201ENST00000355572 SUZ12Q15022 739 aaKnown RBP16.97■□□□□ 0.31
PDLIM7-201ENST00000355572 ZNF805Q5CZA5 627 aa16.97■□□□□ 0.31
PDLIM7-201ENST00000355572 ZNF542PQ5EBM4 170 aa16.97■□□□□ 0.31
PDLIM7-201ENST00000355572 ERMARDQ5T6L9 678 aa16.97■□□□□ 0.31
PDLIM7-201ENST00000355572 AFMIDQ63HM1 303 aa16.97■□□□□ 0.31
PDLIM7-201ENST00000355572 NEK5Q6P3R8 708 aa16.97■□□□□ 0.31
PDLIM7-201ENST00000355572 FBXL19Q6PCT2 694 aa16.97■□□□□ 0.31
PDLIM7-201ENST00000355572 CCNI2Q6ZMN8 369 aaPredicted RBP16.97■□□□□ 0.31
PDLIM7-201ENST00000355572 ABI3BPQ7Z7G0 1075 aa16.97■□□□□ 0.31
PDLIM7-201ENST00000355572 IQCHQ86VS3 1027 aa16.97■□□□□ 0.31
PDLIM7-201ENST00000355572 SLC25A45Q8N413 288 aa16.97■□□□□ 0.31
PDLIM7-201ENST00000355572 THAP2Q9H0W7 228 aa16.97■□□□□ 0.31
PDLIM7-201ENST00000355572 ERVMER34-1Q9H9K5 563 aa16.97■□□□□ 0.31
PDLIM7-201ENST00000355572 CWC15Q9P013 229 aaKnown RBP16.97■□□□□ 0.31
PDLIM7-201ENST00000355572 PNMA8BQ9ULN7 279 aaPredicted RBP16.97■□□□□ 0.31
PDLIM7-201ENST00000355572 APOBEC2Q9Y235 224 aaKnown RBP16.97■□□□□ 0.31
PDLIM7-201ENST00000355572 ZFHX4Q86UP3 3567 aa16.96■□□□□ 0.31
PDLIM7-201ENST00000355572 A0A1W2PQJ5 194 aa16.96■□□□□ 0.31
PDLIM7-201ENST00000355572 EEF2KO00418 725 aaKnown RBP16.96■□□□□ 0.31
PDLIM7-201ENST00000355572 TRIM38O00635 465 aa16.96■□□□□ 0.31
PDLIM7-201ENST00000355572 AREL1O15033 823 aa16.96■□□□□ 0.31
PDLIM7-201ENST00000355572 MUSKO15146 869 aa16.96■□□□□ 0.31
PDLIM7-201ENST00000355572 TNFSF14O43557 240 aa16.96■□□□□ 0.31
PDLIM7-201ENST00000355572 BUB1BO60566 1050 aaPredicted RBP16.96■□□□□ 0.31
PDLIM7-201ENST00000355572 HNRNPA2B1P22626 353 aaKnown RBP16.96■□□□□ 0.31
PDLIM7-201ENST00000355572 PAPOLAP51003 745 aaKnown RBP16.96■□□□□ 0.31
PDLIM7-201ENST00000355572 AIF1P55008 147 aa16.96■□□□□ 0.31
PDLIM7-201ENST00000355572 YBEYP58557 167 aaPredicted RBP16.96■□□□□ 0.31
PDLIM7-201ENST00000355572 RHOAP61586 193 aa16.96■□□□□ 0.31
PDLIM7-201ENST00000355572 SNRPD1P62314 119 aaKnown RBP16.96■□□□□ 0.31
PDLIM7-201ENST00000355572 SEMG2Q02383 582 aa16.96■□□□□ 0.31
PDLIM7-201ENST00000355572 SMTNL2Q2TAL5 461 aa16.96■□□□□ 0.31
PDLIM7-201ENST00000355572 TDRD12Q587J7 1177 aaKnown RBP16.96■□□□□ 0.31
PDLIM7-201ENST00000355572 DHRS13Q6UX07 377 aa16.96■□□□□ 0.31
PDLIM7-201ENST00000355572 RFX8Q6ZV50 586 aa16.96■□□□□ 0.31
PDLIM7-201ENST00000355572 FNIP1Q8TF40 1166 aa16.96■□□□□ 0.31
PDLIM7-201ENST00000355572 KLHDC7BQ96G42 594 aa16.96■□□□□ 0.31
PDLIM7-201ENST00000355572 PPP1R16AQ96I34 528 aa16.96■□□□□ 0.31
PDLIM7-201ENST00000355572 CNDP2Q96KP4 475 aaKnown RBP16.96■□□□□ 0.31
PDLIM7-201ENST00000355572 CDC6Q99741 560 aa16.96■□□□□ 0.31
PDLIM7-201ENST00000355572 C1QTNF2Q9BXJ5 285 aa16.96■□□□□ 0.31
PDLIM7-201ENST00000355572 CALN1Q9BXU9 219 aa16.96■□□□□ 0.31
PDLIM7-201ENST00000355572 SLC17A9Q9BYT1 436 aa16.96■□□□□ 0.31
PDLIM7-201ENST00000355572 CATSPERBQ9H7T0 1116 aa16.96■□□□□ 0.31
PDLIM7-201ENST00000355572 FTSJ1Q9UET6 329 aa16.96■□□□□ 0.31
PDLIM7-201ENST00000355572 KLF15Q9UIH9 416 aa16.96■□□□□ 0.31
PDLIM7-201ENST00000355572 TPX2Q9ULW0 747 aaKnown RBP16.96■□□□□ 0.31
PDLIM7-201ENST00000355572 ENC1O14682 589 aa16.95■□□□□ 0.3
PDLIM7-201ENST00000355572 FGF10O15520 208 aaPredicted RBP16.95■□□□□ 0.3
PDLIM7-201ENST00000355572 AP1G1O43747 822 aa16.95■□□□□ 0.3
PDLIM7-201ENST00000355572 DFNA5O60443 496 aa16.95■□□□□ 0.3
PDLIM7-201ENST00000355572 PRAMEF11O60813 436 aa16.95■□□□□ 0.3
PDLIM7-201ENST00000355572 POP4O95707 220 aaKnown RBP16.95■□□□□ 0.3
PDLIM7-201ENST00000355572 PRKCGP05129 697 aa16.95■□□□□ 0.3
PDLIM7-201ENST00000355572 MYF5P13349 255 aa16.95■□□□□ 0.3
PDLIM7-201ENST00000355572 TIMP2P16035 220 aa16.95■□□□□ 0.3
PDLIM7-201ENST00000355572 ACADVLP49748 655 aa16.95■□□□□ 0.3
PDLIM7-201ENST00000355572 DPYSQ14117 519 aa16.95■□□□□ 0.3
PDLIM7-201ENST00000355572 PARP15Q460N3 678 aa16.95■□□□□ 0.3
PDLIM7-201ENST00000355572 SLC45A4Q5BKX6 768 aa16.95■□□□□ 0.3
PDLIM7-201ENST00000355572 PPP6R3Q5H9R7 873 aaPredicted RBP16.95■□□□□ 0.3
PDLIM7-201ENST00000355572 GDPD4Q6W3E5 623 aa16.95■□□□□ 0.3
PDLIM7-201ENST00000355572 TMPRSS7Q7RTY8 843 aa16.95■□□□□ 0.3
PDLIM7-201ENST00000355572 ZCCHC14Q8WYQ9 949 aaKnown RBP16.95■□□□□ 0.3
PDLIM7-201ENST00000355572 TSC1Q92574 1164 aa16.95■□□□□ 0.3
PDLIM7-201ENST00000355572 FUBP1Q96AE4 644 aaKnown RBP16.95■□□□□ 0.3
PDLIM7-201ENST00000355572 XPO4Q9C0E2 1151 aaKnown RBP16.95■□□□□ 0.3
PDLIM7-201ENST00000355572 HPCAL4Q9UM19 191 aa16.95■□□□□ 0.3
PDLIM7-201ENST00000355572 CAPN11Q9UMQ6 739 aa16.95■□□□□ 0.3
PDLIM7-201ENST00000355572 TTC24A2A3L6 582 aaPredicted RBP16.94■□□□□ 0.3
PDLIM7-201ENST00000355572 MMP20O60882 483 aa16.94■□□□□ 0.3
PDLIM7-201ENST00000355572 AMPD1P23109 780 aa16.94■□□□□ 0.3
PDLIM7-201ENST00000355572 AKT2P31751 481 aa16.94■□□□□ 0.3
PDLIM7-201ENST00000355572 CASP14P31944 242 aa16.94■□□□□ 0.3
PDLIM7-201ENST00000355572 IGFALSP35858 605 aa16.94■□□□□ 0.3
PDLIM7-201ENST00000355572 NUDT1P36639 197 aa16.94■□□□□ 0.3
PDLIM7-201ENST00000355572 GEMIN4P57678 1058 aaKnown RBP16.94■□□□□ 0.3
PDLIM7-201ENST00000355572 CAMK2BQ13554 666 aa16.94■□□□□ 0.3
PDLIM7-201ENST00000355572 FZD2Q14332 565 aa16.94■□□□□ 0.3
PDLIM7-201ENST00000355572 INO80DQ53TQ3 878 aaPredicted RBP16.94■□□□□ 0.3
PDLIM7-201ENST00000355572 KIAA1161Q6NSJ0 714 aa16.94■□□□□ 0.3
PDLIM7-201ENST00000355572 Q6ZSR6 202 aa16.94■□□□□ 0.3
PDLIM7-201ENST00000355572 TSEN2Q8NCE0 465 aaKnown RBP16.94■□□□□ 0.3
PDLIM7-201ENST00000355572 SKA1Q96BD8 255 aa16.94■□□□□ 0.3
PDLIM7-201ENST00000355572 GDAP1L1Q96MZ0 367 aa16.94■□□□□ 0.3
PDLIM7-201ENST00000355572 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.94■□□□□ 0.3
PDLIM7-201ENST00000355572 PACSIN1Q9BY11 444 aa16.94■□□□□ 0.3
PDLIM7-201ENST00000355572 MBNL1Q9NR56 388 aaKnown RBP16.94■□□□□ 0.3
PDLIM7-201ENST00000355572 UBA2Q9UBT2 640 aaPredicted RBP16.94■□□□□ 0.3
PDLIM7-201ENST00000355572 COQ6Q9Y2Z9 468 aa16.94■□□□□ 0.3
PDLIM7-201ENST00000355572 LY6G6EA0A0G2JKS1 128 aa16.93■□□□□ 0.3
PDLIM7-201ENST00000355572 ZSCAN5CA6NGD5 496 aaPredicted RBP16.93■□□□□ 0.3
PDLIM7-201ENST00000355572 SRRM3A6NNA2 597 aaPredicted RBP16.93■□□□□ 0.3
PDLIM7-201ENST00000355572 LDOC1O95751 146 aaPredicted RBP16.93■□□□□ 0.3
PDLIM7-201ENST00000355572 IGSF6O95976 241 aa16.93■□□□□ 0.3
PDLIM7-201ENST00000355572 RARAP10276 462 aa16.93■□□□□ 0.3
PDLIM7-201ENST00000355572 DGKAP23743 735 aa16.93■□□□□ 0.3
PDLIM7-201ENST00000355572 NDST2P52849 883 aa16.93■□□□□ 0.3
PDLIM7-201ENST00000355572 RPS21P63220 83 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms