RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 TREX1Q9NSU2 369 aa23.1■■□□□ 1.29
SCAMP3-202ENST00000355379 YBX2Q9Y2T7 364 aaKnown RBP23.1■■□□□ 1.29
SCAMP3-202ENST00000355379 HCFC2Q9Y5Z7 792 aa23.1■■□□□ 1.29
SCAMP3-202ENST00000355379 NDUFAB1O14561 156 aa23.09■■□□□ 1.29
SCAMP3-202ENST00000355379 PAPSS2O95340 614 aaPredicted RBP23.09■■□□□ 1.29
SCAMP3-202ENST00000355379 CYBBP04839 570 aa23.09■■□□□ 1.29
SCAMP3-202ENST00000355379 FGF1P05230 155 aa23.09■■□□□ 1.29
SCAMP3-202ENST00000355379 PAMP19021 973 aa23.09■■□□□ 1.29
SCAMP3-202ENST00000355379 CSKP41240 450 aa23.09■■□□□ 1.29
SCAMP3-202ENST00000355379 NEK3P51956 506 aa23.09■■□□□ 1.29
SCAMP3-202ENST00000355379 CSE1LP55060 971 aaKnown RBP23.09■■□□□ 1.29
SCAMP3-202ENST00000355379 CDK18Q07002 472 aa23.09■■□□□ 1.29
SCAMP3-202ENST00000355379 SIRPB2Q5JXA9 342 aa23.09■■□□□ 1.29
SCAMP3-202ENST00000355379 FIBINQ8TAL6 211 aa23.09■■□□□ 1.29
SCAMP3-202ENST00000355379 ZNF473Q8WTR7 871 aaKnown RBP23.09■■□□□ 1.29
SCAMP3-202ENST00000355379 NUDCD1Q96RS6 583 aa23.09■■□□□ 1.29
SCAMP3-202ENST00000355379 VPS28Q9UK41 221 aa23.09■■□□□ 1.29
SCAMP3-202ENST00000355379 ACTL7AQ9Y615 435 aa23.09■■□□□ 1.29
SCAMP3-202ENST00000355379 CXorf51AA0A1B0GTR3 108 aa23.08■■□□□ 1.29
SCAMP3-202ENST00000355379 TTC24A2A3L6 582 aaPredicted RBP23.08■■□□□ 1.29
SCAMP3-202ENST00000355379 GOLGA8RI6L899 631 aa23.08■■□□□ 1.29
SCAMP3-202ENST00000355379 INSIG1O15503 277 aa23.08■■□□□ 1.29
SCAMP3-202ENST00000355379 CD160O95971 181 aa23.08■■□□□ 1.29
SCAMP3-202ENST00000355379 SPRP35270 261 aaPredicted RBP23.08■■□□□ 1.29
SCAMP3-202ENST00000355379 NSUN2Q08J23 767 aaKnown RBP eCLIP23.08■■□□□ 1.29
SCAMP3-202ENST00000355379 LAMB3Q13751 1172 aa23.08■■□□□ 1.29
SCAMP3-202ENST00000355379 SLC5A9Q2M3M2 681 aa23.08■■□□□ 1.29
SCAMP3-202ENST00000355379 HSP90AA5PQ58FG0 334 aa23.08■■□□□ 1.29
SCAMP3-202ENST00000355379 KIAA0930Q6ICG6 404 aaPredicted RBP23.08■■□□□ 1.29
SCAMP3-202ENST00000355379 NLRP9Q7RTR0 991 aa23.08■■□□□ 1.29
SCAMP3-202ENST00000355379 KDELC2Q7Z4H8 507 aa23.08■■□□□ 1.29
SCAMP3-202ENST00000355379 USP13Q92995 863 aaPredicted RBP23.08■■□□□ 1.29
SCAMP3-202ENST00000355379 ZNF707Q96C28 371 aaPredicted RBP23.08■■□□□ 1.29
SCAMP3-202ENST00000355379 ZNF778Q96MU6 729 aa23.08■■□□□ 1.29
SCAMP3-202ENST00000355379 KLF6Q99612 283 aaPredicted RBP23.08■■□□□ 1.29
SCAMP3-202ENST00000355379 RBBP8Q99708 897 aa23.08■■□□□ 1.29
SCAMP3-202ENST00000355379 TDP1Q9NUW8 608 aa23.08■■□□□ 1.29
SCAMP3-202ENST00000355379 KIAA1522Q9P206 1035 aaPredicted RBP23.08■■□□□ 1.29
SCAMP3-202ENST00000355379 SLC17A6Q9P2U8 582 aa23.08■■□□□ 1.29
SCAMP3-202ENST00000355379 ARIH1Q9Y4X5 557 aaPredicted RBP23.08■■□□□ 1.29
SCAMP3-202ENST00000355379 PSAT1Q9Y617 370 aa23.08■■□□□ 1.29
SCAMP3-202ENST00000355379 NUP210Q8TEM1 1887 aaPredicted RBP23.08■■□□□ 1.28
SCAMP3-202ENST00000355379 CCDC195A0A1B0GUA6 201 aa23.08■■□□□ 1.28
SCAMP3-202ENST00000355379 PER2O15055 1255 aa23.08■■□□□ 1.28
SCAMP3-202ENST00000355379 SIN3BO75182 1162 aa23.08■■□□□ 1.28
SCAMP3-202ENST00000355379 ALADP13716 330 aa23.08■■□□□ 1.28
SCAMP3-202ENST00000355379 DRD4P21917 467 aa23.08■■□□□ 1.28
SCAMP3-202ENST00000355379 PLK1P53350 603 aa23.08■■□□□ 1.28
SCAMP3-202ENST00000355379 SLC12A1Q13621 1099 aa23.08■■□□□ 1.28
SCAMP3-202ENST00000355379 BMPR2Q13873 1038 aa23.08■■□□□ 1.28
SCAMP3-202ENST00000355379 ZSCAN26Q16670 478 aa23.08■■□□□ 1.28
SCAMP3-202ENST00000355379 RALGPS1Q5JS13 557 aa23.08■■□□□ 1.28
SCAMP3-202ENST00000355379 MROH9Q5TGP6 573 aa23.08■■□□□ 1.28
SCAMP3-202ENST00000355379 ESRP1Q6NXG1 681 aaKnown RBP23.08■■□□□ 1.28
SCAMP3-202ENST00000355379 GRASPQ7Z6J2 395 aaPredicted RBP23.08■■□□□ 1.28
SCAMP3-202ENST00000355379 TAX1BP1Q86VP1 789 aa23.08■■□□□ 1.28
SCAMP3-202ENST00000355379 CNTN4Q8IWV2 1026 aa23.08■■□□□ 1.28
SCAMP3-202ENST00000355379 GDAP1Q8TB36 358 aa23.08■■□□□ 1.28
SCAMP3-202ENST00000355379 WFDC5Q8TCV5 224 aa23.08■■□□□ 1.28
SCAMP3-202ENST00000355379 TCP10LQ8TDR4 215 aa23.08■■□□□ 1.28
SCAMP3-202ENST00000355379 ACDQ96AP0 544 aa23.08■■□□□ 1.28
SCAMP3-202ENST00000355379 TRIB3Q96RU7 358 aa23.08■■□□□ 1.28
SCAMP3-202ENST00000355379 SMG9Q9H0W8 520 aaKnown RBP23.08■■□□□ 1.28
SCAMP3-202ENST00000355379 NOD2Q9HC29 1040 aa23.08■■□□□ 1.28
SCAMP3-202ENST00000355379 MLXIPLQ9NP71 852 aa23.08■■□□□ 1.28
SCAMP3-202ENST00000355379 SCUBE2Q9NQ36 999 aa23.08■■□□□ 1.28
SCAMP3-202ENST00000355379 IL1RAPL1Q9NZN1 696 aa23.08■■□□□ 1.28
SCAMP3-202ENST00000355379 CCL26Q9Y258 94 aa23.08■■□□□ 1.28
SCAMP3-202ENST00000355379 COPEO14579 308 aa23.07■■□□□ 1.28
SCAMP3-202ENST00000355379 SNAP91O60641 907 aa23.07■■□□□ 1.28
SCAMP3-202ENST00000355379 TMCC1O94876 653 aa23.07■■□□□ 1.28
SCAMP3-202ENST00000355379 NDST3O95803 873 aa23.07■■□□□ 1.28
SCAMP3-202ENST00000355379 ITGA2BP08514 1039 aa23.07■■□□□ 1.28
SCAMP3-202ENST00000355379 RGRP47804 291 aa23.07■■□□□ 1.28
SCAMP3-202ENST00000355379 ARCN1P48444 511 aaKnown RBP23.07■■□□□ 1.28
SCAMP3-202ENST00000355379 SEPT7Q16181 437 aaKnown RBP23.07■■□□□ 1.28
SCAMP3-202ENST00000355379 TSTD2Q5T7W7 516 aa23.07■■□□□ 1.28
SCAMP3-202ENST00000355379 HHATQ5VTY9 493 aa23.07■■□□□ 1.28
SCAMP3-202ENST00000355379 LVRNQ6Q4G3 990 aa23.07■■□□□ 1.28
SCAMP3-202ENST00000355379 STRA8Q7Z7C7 330 aa23.07■■□□□ 1.28
SCAMP3-202ENST00000355379 MCMBPQ9BTE3 642 aa23.07■■□□□ 1.28
SCAMP3-202ENST00000355379 C2orf49Q9BVC5 232 aaPredicted RBP23.07■■□□□ 1.28
SCAMP3-202ENST00000355379 IARS2Q9NSE4 1012 aaKnown RBP23.07■■□□□ 1.28
SCAMP3-202ENST00000355379 VPS51Q9UID3 782 aa23.07■■□□□ 1.28
SCAMP3-202ENST00000355379 ANKRD36A6QL64 1941 aa23.06■■□□□ 1.28
SCAMP3-202ENST00000355379 MROH6A6NGR9 719 aa23.06■■□□□ 1.28
SCAMP3-202ENST00000355379 LIMK2P53671 638 aa23.06■■□□□ 1.28
SCAMP3-202ENST00000355379 NTHL1P78549 312 aa23.06■■□□□ 1.28
SCAMP3-202ENST00000355379 USP4Q13107 963 aa23.06■■□□□ 1.28
SCAMP3-202ENST00000355379 SEPT6Q14141 434 aa23.06■■□□□ 1.28
SCAMP3-202ENST00000355379 DUSP6Q16828 381 aa23.06■■□□□ 1.28
SCAMP3-202ENST00000355379 RGS9BPQ6ZS82 235 aa23.06■■□□□ 1.28
SCAMP3-202ENST00000355379 ADGRD2Q7Z7M1 963 aa23.06■■□□□ 1.28
SCAMP3-202ENST00000355379 TTC16Q8NEE8 873 aa23.06■■□□□ 1.28
SCAMP3-202ENST00000355379 PEX13Q92968 403 aa23.06■■□□□ 1.28
SCAMP3-202ENST00000355379 ISL2Q96A47 359 aa23.06■■□□□ 1.28
SCAMP3-202ENST00000355379 AGAP2Q99490 1192 aa23.06■■□□□ 1.28
SCAMP3-202ENST00000355379 RABEP2Q9H5N1 569 aa23.06■■□□□ 1.28
SCAMP3-202ENST00000355379 TBC1D14Q9P2M4 693 aa23.06■■□□□ 1.28
SCAMP3-202ENST00000355379 LHX3Q9UBR4 397 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms