RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 GOLGA6DP0CG33 693 aa27.4■■□□□ 1.98
SSBP4-202ENST00000348495 DRD1P21728 446 aa27.4■■□□□ 1.98
SSBP4-202ENST00000348495 AP1S1P61966 158 aa27.4■■□□□ 1.98
SSBP4-202ENST00000348495 SNRPD1P62314 119 aaKnown RBP27.4■■□□□ 1.98
SSBP4-202ENST00000348495 ENPP2Q13822 863 aa27.4■■□□□ 1.98
SSBP4-202ENST00000348495 EGFLAMQ63HQ2 1017 aa27.4■■□□□ 1.98
SSBP4-202ENST00000348495 Q6ZVU0 165 aa27.4■■□□□ 1.98
SSBP4-202ENST00000348495 MRGPRX2Q96LB1 330 aa27.4■■□□□ 1.98
SSBP4-202ENST00000348495 LRRC40Q9H9A6 602 aa27.4■■□□□ 1.98
SSBP4-202ENST00000348495 GOLGA6AQ9NYA3 693 aa27.4■■□□□ 1.98
SSBP4-202ENST00000348495 SLC8A2Q9UPR5 921 aa27.4■■□□□ 1.98
SSBP4-202ENST00000348495 SLC34A2O95436 690 aa27.39■■□□□ 1.98
SSBP4-202ENST00000348495 EGFP01133 1207 aa27.39■■□□□ 1.98
SSBP4-202ENST00000348495 ADRA1AP35348 466 aa27.39■■□□□ 1.98
SSBP4-202ENST00000348495 MLF2Q15773 248 aaPredicted RBP27.39■■□□□ 1.98
SSBP4-202ENST00000348495 CARD16Q5EG05 197 aa27.39■■□□□ 1.98
SSBP4-202ENST00000348495 EMC10Q5UCC4 262 aa27.39■■□□□ 1.98
SSBP4-202ENST00000348495 TPRG1Q6ZUI0 275 aa27.39■■□□□ 1.98
SSBP4-202ENST00000348495 ZNF534Q76KX8 674 aa27.39■■□□□ 1.98
SSBP4-202ENST00000348495 OR2A12Q8NGT7 310 aa27.39■■□□□ 1.98
SSBP4-202ENST00000348495 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP27.39■■□□□ 1.981e-6■■■■■ 52.4
SSBP4-202ENST00000348495 PMPCBO75439 489 aa27.38■■□□□ 1.97
SSBP4-202ENST00000348495 MAPK8P45983 427 aa27.38■■□□□ 1.97
SSBP4-202ENST00000348495 LMAN1P49257 510 aa27.38■■□□□ 1.97
SSBP4-202ENST00000348495 WNT3AP56704 352 aa27.38■■□□□ 1.97
SSBP4-202ENST00000348495 GRSF1Q12849 480 aaKnown RBP eCLIP27.38■■□□□ 1.97
SSBP4-202ENST00000348495 SPARCL1Q14515 664 aa27.38■■□□□ 1.97
SSBP4-202ENST00000348495 HNRNPA1L2Q32P51 320 aaKnown RBP27.38■■□□□ 1.97
SSBP4-202ENST00000348495 FNDC3BQ53EP0 1204 aaKnown RBP27.38■■□□□ 1.97
SSBP4-202ENST00000348495 GSPT2Q8IYD1 628 aaKnown RBP27.38■■□□□ 1.97
SSBP4-202ENST00000348495 ZCCHC9Q8N567 271 aaKnown RBP27.38■■□□□ 1.97
SSBP4-202ENST00000348495 FAM3CQ92520 227 aa27.38■■□□□ 1.97
SSBP4-202ENST00000348495 NPC1O15118 1278 aa27.38■■□□□ 1.97
SSBP4-202ENST00000348495 GRIA1P42261 906 aa27.38■■□□□ 1.97
SSBP4-202ENST00000348495 IL12RB1P42701 662 aa27.38■■□□□ 1.97
SSBP4-202ENST00000348495 MYLK3Q32MK0 819 aa27.38■■□□□ 1.97
SSBP4-202ENST00000348495 DPY19L3Q6ZPD9 716 aa27.38■■□□□ 1.97
SSBP4-202ENST00000348495 IPMKQ8NFU5 416 aa27.38■■□□□ 1.97
SSBP4-202ENST00000348495 KCNV2Q8TDN2 545 aa27.38■■□□□ 1.97
SSBP4-202ENST00000348495 PTPRN2Q92932 1015 aa27.38■■□□□ 1.97
SSBP4-202ENST00000348495 ACOX2Q99424 681 aa27.38■■□□□ 1.97
SSBP4-202ENST00000348495 EVLQ9UI08 416 aaPredicted RBP27.38■■□□□ 1.97
SSBP4-202ENST00000348495 WASH3PC4AMC7 463 aa27.37■■□□□ 1.97
SSBP4-202ENST00000348495 GOLGA8MH3BSY2 632 aa27.37■■□□□ 1.97
SSBP4-202ENST00000348495 CCNHP51946 323 aaPredicted RBP27.37■■□□□ 1.97
SSBP4-202ENST00000348495 OLIG2Q13516 323 aa27.37■■□□□ 1.97
SSBP4-202ENST00000348495 E2F5Q15329 346 aa27.37■■□□□ 1.97
SSBP4-202ENST00000348495 RANBP10Q6VN20 620 aa27.37■■□□□ 1.97
SSBP4-202ENST00000348495 CAND1Q86VP6 1230 aaKnown RBP27.37■■□□□ 1.97
SSBP4-202ENST00000348495 OR6K2Q8NGY2 324 aa27.37■■□□□ 1.97
SSBP4-202ENST00000348495 PWWP2AQ96N64 755 aa27.37■■□□□ 1.97
SSBP4-202ENST00000348495 FMO2Q99518 471 aa27.37■■□□□ 1.97
SSBP4-202ENST00000348495 MTG2Q9H4K7 406 aa27.37■■□□□ 1.97
SSBP4-202ENST00000348495 WNT16Q9UBV4 365 aa27.37■■□□□ 1.97
SSBP4-202ENST00000348495 TCF20Q9UGU0 1960 aaKnown RBP27.37■■□□□ 1.97
SSBP4-202ENST00000348495 MAN2B1O00754 1011 aa27.36■■□□□ 1.97
SSBP4-202ENST00000348495 PRKCHP24723 683 aa27.36■■□□□ 1.97
SSBP4-202ENST00000348495 PRKCQQ04759 706 aa27.36■■□□□ 1.97
SSBP4-202ENST00000348495 CBLBQ13191 982 aa27.36■■□□□ 1.97
SSBP4-202ENST00000348495 SERPINA13PQ6UXR4 307 aa27.36■■□□□ 1.97
SSBP4-202ENST00000348495 ZNF366Q8N895 744 aa27.36■■□□□ 1.97
SSBP4-202ENST00000348495 ZNF513Q8N8E2 541 aaPredicted RBP27.36■■□□□ 1.97
SSBP4-202ENST00000348495 SERPINB12Q96P63 405 aa27.36■■□□□ 1.97
SSBP4-202ENST00000348495 FRMD8Q9BZ67 464 aaPredicted RBP27.36■■□□□ 1.97
SSBP4-202ENST00000348495 CPEB1Q9BZB8 566 aaKnown RBP27.36■■□□□ 1.97
SSBP4-202ENST00000348495 FOXP3Q9BZS1 431 aa27.36■■□□□ 1.97
SSBP4-202ENST00000348495 LOC285095A0A1B0GVY8 99 aa27.36■■□□□ 1.97
SSBP4-202ENST00000348495 USP12O75317 370 aa27.36■■□□□ 1.97
SSBP4-202ENST00000348495 POP4O95707 220 aaKnown RBP27.36■■□□□ 1.97
SSBP4-202ENST00000348495 EPOP01588 193 aa27.36■■□□□ 1.97
SSBP4-202ENST00000348495 HLA-EP13747 358 aa27.36■■□□□ 1.97
SSBP4-202ENST00000348495 MAGEA3P43357 314 aa27.36■■□□□ 1.97
SSBP4-202ENST00000348495 CCINQ13939 588 aa27.36■■□□□ 1.97
SSBP4-202ENST00000348495 NAPEPLDQ6IQ20 393 aa27.36■■□□□ 1.97
SSBP4-202ENST00000348495 PPP1R21Q6ZMI0 780 aa27.36■■□□□ 1.97
SSBP4-202ENST00000348495 FEM1CQ96JP0 617 aa27.36■■□□□ 1.97
SSBP4-202ENST00000348495 TRIB3Q96RU7 358 aa27.36■■□□□ 1.97
SSBP4-202ENST00000348495 TBL1YQ9BQ87 522 aa27.36■■□□□ 1.97
SSBP4-202ENST00000348495 TDRD1Q9BXT4 1180 aaKnown RBP27.36■■□□□ 1.97
SSBP4-202ENST00000348495 ARHGEF3Q9NR81 526 aa27.36■■□□□ 1.97
SSBP4-202ENST00000348495 MTRF1LQ9UGC7 380 aaKnown RBP27.36■■□□□ 1.97
SSBP4-202ENST00000348495 EDDM13A0A1B0GTR0 161 aa27.35■■□□□ 1.97
SSBP4-202ENST00000348495 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP27.35■■□□□ 1.97
SSBP4-202ENST00000348495 AGTP01019 485 aa27.35■■□□□ 1.97
SSBP4-202ENST00000348495 FAM153BP0C7A2 387 aa27.35■■□□□ 1.97
SSBP4-202ENST00000348495 MLNP12872 115 aa27.35■■□□□ 1.97
SSBP4-202ENST00000348495 GKP32189 559 aa27.35■■□□□ 1.97
SSBP4-202ENST00000348495 TRAF2Q12933 501 aa27.35■■□□□ 1.97
SSBP4-202ENST00000348495 PCSK7Q16549 785 aa27.35■■□□□ 1.97
SSBP4-202ENST00000348495 FAM153CQ494X1 144 aa27.35■■□□□ 1.97
SSBP4-202ENST00000348495 C9orf64Q5T6V5 341 aa27.35■■□□□ 1.97
SSBP4-202ENST00000348495 DENND5AQ6IQ26 1287 aa27.35■■□□□ 1.97
SSBP4-202ENST00000348495 LRRC8BQ6P9F7 803 aa27.35■■□□□ 1.97
SSBP4-202ENST00000348495 LINC00523Q86TU6 105 aa27.35■■□□□ 1.97
SSBP4-202ENST00000348495 CHST14Q8NCH0 376 aa27.35■■□□□ 1.97
SSBP4-202ENST00000348495 AENQ8WTP8 325 aaKnown RBP27.35■■□□□ 1.97
SSBP4-202ENST00000348495 TUBGCP5Q96RT8 1024 aa27.35■■□□□ 1.97
SSBP4-202ENST00000348495 FICDQ9BVA6 458 aa27.35■■□□□ 1.97
SSBP4-202ENST00000348495 FSD1LQ9BXM9 530 aa27.35■■□□□ 1.97
SSBP4-202ENST00000348495 XAB2Q9HCS7 855 aaKnown RBP27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms