RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 TIFAQ96CG3 184 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 ULBP1Q9BZM6 244 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 ACSS2Q9NR19 701 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 ARL8BQ9NVJ2 186 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 PADI4Q9UM07 663 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 SIGLEC16A6NMB1 481 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 SNTNA6NMZ2 147 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 H0YGN5 161 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 EDF1O60869 148 aaKnown RBP11□□□□□ -0.65
CLCN6-202ENST00000346436 STAU1O95793 577 aaKnown RBP11□□□□□ -0.65
CLCN6-202ENST00000346436 IYDQ6PHW0 289 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 CYP20A1Q6UW02 462 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 LRRC52Q8N7C0 313 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 MYLPFQ96A32 169 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 ACTR8Q9H981 624 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 APOBEC3GQ9HC16 384 aaKnown RBP11□□□□□ -0.65
CLCN6-202ENST00000346436 ARHGEF4Q9NR80 690 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 ETNK2Q9NVF9 386 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 TUBGCP4Q9UGJ1 667 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 NFS1Q9Y697 457 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 ADGRA3Q8IWK6 1321 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 TMEM191CA6NGB0 347 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 DCXO43602 365 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 TLR5O60602 858 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 LYPLA1O75608 230 aaPredicted RBP11□□□□□ -0.65
CLCN6-202ENST00000346436 BNC1Q01954 994 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 BST1Q10588 318 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 INPP5AQ14642 412 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 SIAH1Q8IUQ4 282 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 PLEKHO2Q8TD55 490 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 USP7Q93009 1102 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 NMD3Q96D46 503 aaKnown RBP11□□□□□ -0.65
CLCN6-202ENST00000346436 MED8Q96G25 268 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 MBOAT7Q96N66 472 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 CATSPER2Q96P56 530 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 BBS4Q96RK4 519 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 DCDC2Q9UHG0 476 aa11□□□□□ -0.65
CLCN6-202ENST00000346436 ATXN2Q99700 1313 aaKnown RBP10.99□□□□□ -0.65
CLCN6-202ENST00000346436 TCRBV9S1A1TA0A576 114 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 GSAPA4D1B5 854 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 MAN2B1O00754 1011 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 PSMG1O95456 288 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 MLYCDO95822 493 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 PROCP04070 461 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 RBP1P09455 135 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 TBL3Q12788 808 aaKnown RBP10.99□□□□□ -0.65
CLCN6-202ENST00000346436 PTPN20Q4JDL3 420 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 TPGS2Q68CL5 300 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 MFSD5Q6N075 450 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 C16orf89Q6UX73 402 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 MARK2Q7KZI7 788 aaKnown RBP10.99□□□□□ -0.65
CLCN6-202ENST00000346436 TMPRSS6Q8IU80 811 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 PPP1R14AQ96A00 147 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 PRRG3Q9BZD7 231 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 ILKAPQ9H0C8 392 aaPredicted RBP10.99□□□□□ -0.65
CLCN6-202ENST00000346436 IRF2BPLQ9H1B7 796 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 ZSCAN32Q9NX65 697 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 MRTO4Q9UKD2 239 aaKnown RBP10.99□□□□□ -0.65
CLCN6-202ENST00000346436 TRUB2O95900 331 aaKnown RBP10.99□□□□□ -0.65
CLCN6-202ENST00000346436 COL6A1P12109 1028 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 FOXN2P32314 431 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 CASP6P55212 293 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 PPP1R15BQ5SWA1 713 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 MON1AQ86VX9 555 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 OR14C36Q8NHC7 312 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 BRI3BPQ8WY22 251 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 STARD8Q92502 1023 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 WARS2Q9UGM6 360 aaKnown RBP10.99□□□□□ -0.65
CLCN6-202ENST00000346436 VANGL2Q9ULK5 521 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 EME2A4GXA9 379 aaPredicted RBP10.99□□□□□ -0.65
CLCN6-202ENST00000346436 ANKDD1BA6NHY2 528 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 TPP1O14773 563 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 FYNP06241 537 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 ITGAVP06756 1048 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 ALADP13716 330 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 CASRP41180 1078 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 SPIDRQ14159 915 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 UBAP2Q5T6F2 1119 aaKnown RBP10.99□□□□□ -0.65
CLCN6-202ENST00000346436 C12orf56Q8IXR9 622 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 SLC22A17Q8WUG5 538 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 MARK4Q96L34 752 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 ALOX15BO15296 676 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 CYP7B1O75881 506 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 ASLP04424 464 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 ERBB2P04626 1255 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 ELFN1P0C7U0 828 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 TAS2R50P59544 299 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 BNIP1Q12981 228 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 SNAP47Q5SQN1 464 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 FAM13CQ8NE31 585 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 DBF4BQ8NFT6 615 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 HTR3CQ8WXA8 447 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 VPS33AQ96AX1 596 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 ZYG11BQ9C0D3 744 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 ZFYVE1Q9HBF4 777 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 PTPRJQ12913 1337 aa10.99□□□□□ -0.65
CLCN6-202ENST00000346436 C4BPAP04003 597 aaKnown RBP10.98□□□□□ -0.65
CLCN6-202ENST00000346436 SPATA31D3P0C874 917 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 GDF10P55107 478 aa10.98□□□□□ -0.65
CLCN6-202ENST00000346436 PLIN5Q00G26 463 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms