RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 TEX26Q8N6G2 289 aa12□□□□□ -0.49
SNCA-202ENST00000345009 TSEN2Q8NCE0 465 aaKnown RBP12□□□□□ -0.49
SNCA-202ENST00000345009 PRSS33Q8NF86 280 aa12□□□□□ -0.49
SNCA-202ENST00000345009 GRIN3AQ8TCU5 1115 aa12□□□□□ -0.49
SNCA-202ENST00000345009 HCAR2Q8TDS4 363 aa12□□□□□ -0.49
SNCA-202ENST00000345009 ZNF641Q96N77 438 aaPredicted RBP12□□□□□ -0.49
SNCA-202ENST00000345009 PHOX2BQ99453 314 aa12□□□□□ -0.49
SNCA-202ENST00000345009 VAT1Q99536 393 aa12□□□□□ -0.49
SNCA-202ENST00000345009 LGMNQ99538 433 aa12□□□□□ -0.49
SNCA-202ENST00000345009 CPEB1Q9BZB8 566 aaKnown RBP12□□□□□ -0.49
SNCA-202ENST00000345009 POLR1EQ9GZS1 481 aaKnown RBP12□□□□□ -0.49
SNCA-202ENST00000345009 ZDHHC6Q9H6R6 413 aa12□□□□□ -0.49
SNCA-202ENST00000345009 SGK2Q9HBY8 427 aa12□□□□□ -0.49
SNCA-202ENST00000345009 HOMER3Q9NSC5 361 aa12□□□□□ -0.49
SNCA-202ENST00000345009 SAE1Q9UBE0 346 aaPredicted RBP12□□□□□ -0.49
SNCA-202ENST00000345009 FZD4Q9ULV1 537 aa12□□□□□ -0.49
SNCA-202ENST00000345009 ACTL7AQ9Y615 435 aa12□□□□□ -0.49
SNCA-202ENST00000345009 SDK1Q7Z5N4 2213 aa12□□□□□ -0.49
SNCA-202ENST00000345009 KMT2EQ8IZD2 1858 aa12□□□□□ -0.49
SNCA-202ENST00000345009 GON4LQ3T8J9 2241 aa11.99□□□□□ -0.49
SNCA-202ENST00000345009 WDR87Q6ZQQ6 2873 aa11.99□□□□□ -0.49
SNCA-202ENST00000345009 A0A1W2PQ67 120 aa11.99□□□□□ -0.49
SNCA-202ENST00000345009 ENC1O14682 589 aa11.99□□□□□ -0.49
SNCA-202ENST00000345009 MID1O15344 667 aa11.99□□□□□ -0.49
SNCA-202ENST00000345009 SLC7A4O43246 635 aa11.99□□□□□ -0.49
SNCA-202ENST00000345009 CEP104O60308 925 aa11.99□□□□□ -0.49
SNCA-202ENST00000345009 PEX11BO96011 259 aa11.99□□□□□ -0.49
SNCA-202ENST00000345009 JCHAINP01591 159 aa11.99□□□□□ -0.49
SNCA-202ENST00000345009 IGLV3-19P01714 112 aa11.99□□□□□ -0.49
SNCA-202ENST00000345009 CA4P22748 312 aa11.99□□□□□ -0.49
SNCA-202ENST00000345009 XPAP23025 273 aaPredicted RBP11.99□□□□□ -0.49
SNCA-202ENST00000345009 SERPINA4P29622 427 aa11.99□□□□□ -0.49
SNCA-202ENST00000345009 P2RY2P41231 377 aa11.99□□□□□ -0.49
SNCA-202ENST00000345009 SUOXP51687 545 aa11.99□□□□□ -0.49
SNCA-202ENST00000345009 EIF3EP60228 445 aaKnown RBP11.99□□□□□ -0.49
SNCA-202ENST00000345009 POLR2LP62875 67 aaKnown RBP11.99□□□□□ -0.49
SNCA-202ENST00000345009 IFI35P80217 286 aaPredicted RBP11.99□□□□□ -0.49
SNCA-202ENST00000345009 DMWDQ09019 674 aa11.99□□□□□ -0.49
SNCA-202ENST00000345009 SIM2Q14190 667 aaPredicted RBP11.99□□□□□ -0.49
SNCA-202ENST00000345009 SLC45A4Q5BKX6 768 aa11.99□□□□□ -0.49
SNCA-202ENST00000345009 ZNF805Q5CZA5 627 aa11.99□□□□□ -0.49
SNCA-202ENST00000345009 SPDYCQ5MJ68 293 aa11.99□□□□□ -0.49
SNCA-202ENST00000345009 FBXL19Q6PCT2 694 aa11.99□□□□□ -0.49
SNCA-202ENST00000345009 DARS2Q6PI48 645 aaKnown RBP11.99□□□□□ -0.49
SNCA-202ENST00000345009 GDPD4Q6W3E5 623 aa11.99□□□□□ -0.49
SNCA-202ENST00000345009 LPCAT2Q7L5N7 544 aa11.99□□□□□ -0.49
SNCA-202ENST00000345009 CACUL1Q86Y37 369 aa11.99□□□□□ -0.49
SNCA-202ENST00000345009 SLC13A5Q86YT5 568 aaPredicted RBP11.99□□□□□ -0.49
SNCA-202ENST00000345009 CDKL3Q8IVW4 592 aaPredicted RBP11.99□□□□□ -0.49
SNCA-202ENST00000345009 SLC35F6Q8N357 371 aa11.99□□□□□ -0.49
SNCA-202ENST00000345009 HDDC3Q8N4P3 179 aa11.99□□□□□ -0.49
SNCA-202ENST00000345009 CHST14Q8NCH0 376 aa11.99□□□□□ -0.49
SNCA-202ENST00000345009 ACTL9Q8TC94 416 aa11.99□□□□□ -0.49
SNCA-202ENST00000345009 MAML1Q92585 1016 aa11.99□□□□□ -0.49
SNCA-202ENST00000345009 MGME1Q9BQP7 344 aa11.99□□□□□ -0.49
SNCA-202ENST00000345009 BTBD1Q9H0C5 482 aa11.99□□□□□ -0.49
SNCA-202ENST00000345009 PCED1AQ9H1Q7 454 aa11.99□□□□□ -0.49
SNCA-202ENST00000345009 SLC6A17Q9H1V8 727 aa11.99□□□□□ -0.49
SNCA-202ENST00000345009 NT5MQ9NPB1 228 aa11.99□□□□□ -0.49
SNCA-202ENST00000345009 SEPT10Q9P0V9 454 aa11.99□□□□□ -0.49
SNCA-202ENST00000345009 USP36Q9P275 1121 aaKnown RBP11.99□□□□□ -0.49
SNCA-202ENST00000345009 LHX3Q9UBR4 397 aa11.99□□□□□ -0.49
SNCA-202ENST00000345009 EVLQ9UI08 416 aaPredicted RBP11.99□□□□□ -0.49
SNCA-202ENST00000345009 TRHDEQ9UKU6 1024 aa11.99□□□□□ -0.49
SNCA-202ENST00000345009 TPX2Q9ULW0 747 aaKnown RBP11.99□□□□□ -0.49
SNCA-202ENST00000345009 CYP8B1Q9UNU6 501 aa11.99□□□□□ -0.49
SNCA-202ENST00000345009 ZKSCAN5Q9Y2L8 839 aa11.99□□□□□ -0.49
SNCA-202ENST00000345009 TTLL3Q9Y4R7 772 aa11.99□□□□□ -0.49
SNCA-202ENST00000345009 A0A1W2PP55 124 aa11.98□□□□□ -0.49
SNCA-202ENST00000345009 CTAGE9A4FU28 777 aa11.98□□□□□ -0.49
SNCA-202ENST00000345009 LRRC72A6NJI9 287 aa11.98□□□□□ -0.49
SNCA-202ENST00000345009 USP27XA6NNY8 438 aa11.98□□□□□ -0.49
SNCA-202ENST00000345009 KCNK1O00180 336 aa11.98□□□□□ -0.49
SNCA-202ENST00000345009 LILRB5O75023 590 aa11.98□□□□□ -0.49
SNCA-202ENST00000345009 UGT2B4P06133 528 aa11.98□□□□□ -0.49
SNCA-202ENST00000345009 RBP3P10745 1247 aa11.98□□□□□ -0.49
SNCA-202ENST00000345009 PECAM1P16284 738 aaPredicted RBP11.98□□□□□ -0.49
SNCA-202ENST00000345009 TCP1P17987 556 aaKnown RBP11.98□□□□□ -0.49
SNCA-202ENST00000345009 ITGB7P26010 798 aa11.98□□□□□ -0.49
SNCA-202ENST00000345009 TNNT3P45378 269 aaPredicted RBP11.98□□□□□ -0.49
SNCA-202ENST00000345009 OTUD4Q01804 1114 aaKnown RBP11.98□□□□□ -0.49
SNCA-202ENST00000345009 BCL2L1Q07817 233 aa11.98□□□□□ -0.49
SNCA-202ENST00000345009 ADCY2Q08462 1091 aa11.98□□□□□ -0.49
SNCA-202ENST00000345009 PRKD1Q15139 912 aaPredicted RBP11.98□□□□□ -0.49
SNCA-202ENST00000345009 NOMO1Q15155 1222 aa11.98□□□□□ -0.49
SNCA-202ENST00000345009 LONRF2Q1L5Z9 754 aa11.98□□□□□ -0.49
SNCA-202ENST00000345009 MAP7D1Q3KQU3 841 aa11.98□□□□□ -0.49
SNCA-202ENST00000345009 DCAF12L1Q5VU92 463 aa11.98□□□□□ -0.49
SNCA-202ENST00000345009 AADACL2Q6P093 401 aa11.98□□□□□ -0.49
SNCA-202ENST00000345009 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.98□□□□□ -0.49
SNCA-202ENST00000345009 PRR23BQ6ZRT6 265 aa11.98□□□□□ -0.49
SNCA-202ENST00000345009 ERN2Q76MJ5 926 aaKnown RBP11.98□□□□□ -0.49
SNCA-202ENST00000345009 NDUFAF2Q8N183 169 aa11.98□□□□□ -0.49
SNCA-202ENST00000345009 HTR3CQ8WXA8 447 aa11.98□□□□□ -0.49
SNCA-202ENST00000345009 RLN3Q8WXF3 142 aa11.98□□□□□ -0.49
SNCA-202ENST00000345009 FOXJ1Q92949 421 aa11.98□□□□□ -0.49
SNCA-202ENST00000345009 RAB7BQ96AH8 199 aa11.98□□□□□ -0.49
SNCA-202ENST00000345009 TOE1Q96GM8 510 aaKnown RBP11.98□□□□□ -0.49
SNCA-202ENST00000345009 EXOC2Q96KP1 924 aa11.98□□□□□ -0.49
SNCA-202ENST00000345009 NUDCD1Q96RS6 583 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms