RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 DEPDC7Q96QD5 511 aa12.62□□□□□ -0.39
SGCA-202ENST00000344627 EPAS1Q99814 870 aa12.62□□□□□ -0.39
SGCA-202ENST00000344627 CNPY3Q9BT09 278 aa12.62□□□□□ -0.39
SGCA-202ENST00000344627 RTN4Q9NQC3 1192 aaKnown RBP12.62□□□□□ -0.39
SGCA-202ENST00000344627 ZFR2Q9UPR6 939 aaKnown RBP12.62□□□□□ -0.39
SGCA-202ENST00000344627 CSNK1G3Q9Y6M4 447 aa12.62□□□□□ -0.39
SGCA-202ENST00000344627 WASF2Q9Y6W5 498 aa12.62□□□□□ -0.39
SGCA-202ENST00000344627 ARID1BQ8NFD5 2236 aaPredicted RBP12.62□□□□□ -0.39
SGCA-202ENST00000344627 CHD5Q8TDI0 1954 aa12.61□□□□□ -0.39
SGCA-202ENST00000344627 SCAMP1O15126 338 aa12.61□□□□□ -0.39
SGCA-202ENST00000344627 ATXN7O15265 892 aaPredicted RBP12.61□□□□□ -0.39
SGCA-202ENST00000344627 KDELR3O43731 214 aa12.61□□□□□ -0.39
SGCA-202ENST00000344627 DXOO77932 396 aaKnown RBP12.61□□□□□ -0.39
SGCA-202ENST00000344627 PAK4O96013 591 aaPredicted RBP12.61□□□□□ -0.39
SGCA-202ENST00000344627 MT-CO3P00414 261 aa12.61□□□□□ -0.39
SGCA-202ENST00000344627 SERPINC1P01008 464 aa12.61□□□□□ -0.39
SGCA-202ENST00000344627 ADRB3P13945 408 aa12.61□□□□□ -0.39
SGCA-202ENST00000344627 ITGB7P26010 798 aa12.61□□□□□ -0.39
SGCA-202ENST00000344627 RABIFP47224 123 aa12.61□□□□□ -0.39
SGCA-202ENST00000344627 GSCP56915 257 aaPredicted RBP12.61□□□□□ -0.39
SGCA-202ENST00000344627 ERVPABLB-1P60509 514 aa12.61□□□□□ -0.39
SGCA-202ENST00000344627 INSM1Q01101 510 aaPredicted RBP12.61□□□□□ -0.39
SGCA-202ENST00000344627 SEMG2Q02383 582 aa12.61□□□□□ -0.39
SGCA-202ENST00000344627 RAD51Q06609 339 aa12.61□□□□□ -0.39
SGCA-202ENST00000344627 SGCGQ13326 291 aa12.61□□□□□ -0.39
SGCA-202ENST00000344627 TBC1D25Q3MII6 688 aa12.61□□□□□ -0.39
SGCA-202ENST00000344627 ATXN7L2Q5T6C5 722 aaPredicted RBP12.61□□□□□ -0.39
SGCA-202ENST00000344627 BROXQ5VW32 411 aa12.61□□□□□ -0.39
SGCA-202ENST00000344627 IGF2-ASQ6U949 168 aa12.61□□□□□ -0.39
SGCA-202ENST00000344627 TMC6Q7Z403 805 aa12.61□□□□□ -0.39
SGCA-202ENST00000344627 IRF2BP2Q7Z5L9 587 aa12.61□□□□□ -0.39
SGCA-202ENST00000344627 PTAR1Q7Z6K3 402 aaPredicted RBP12.61□□□□□ -0.39
SGCA-202ENST00000344627 NETO2Q8NC67 525 aa12.61□□□□□ -0.39
SGCA-202ENST00000344627 ZNF248Q8NDW4 579 aa12.61□□□□□ -0.39
SGCA-202ENST00000344627 DENND6BQ8NEG7 585 aa12.61□□□□□ -0.39
SGCA-202ENST00000344627 BTN2A2Q8WVV5 523 aa12.61□□□□□ -0.39
SGCA-202ENST00000344627 WBP1Q96G27 269 aa12.61□□□□□ -0.39
SGCA-202ENST00000344627 TBATAQ96M53 351 aa12.61□□□□□ -0.39
SGCA-202ENST00000344627 DCBLD2Q96PD2 775 aa12.61□□□□□ -0.39
SGCA-202ENST00000344627 LENG8Q96PV6 779 aaPredicted RBP12.61□□□□□ -0.39
SGCA-202ENST00000344627 CATSPERBQ9H7T0 1116 aa12.61□□□□□ -0.39
SGCA-202ENST00000344627 PARVAQ9NVD7 372 aa12.61□□□□□ -0.39
SGCA-202ENST00000344627 TAS2R14Q9NYV8 317 aa12.61□□□□□ -0.39
SGCA-202ENST00000344627 IPO11Q9UI26 975 aaKnown RBP12.61□□□□□ -0.39
SGCA-202ENST00000344627 BAHCC1Q9P281 2608 aa12.61□□□□□ -0.39
SGCA-202ENST00000344627 ITPR1Q14643 2758 aa12.61□□□□□ -0.39
SGCA-202ENST00000344627 ACACAQ13085 2346 aa12.61□□□□□ -0.39
SGCA-202ENST00000344627 ZSCAN5CA6NGD5 496 aaPredicted RBP12.6□□□□□ -0.39
SGCA-202ENST00000344627 LRRC53A6NM62 1247 aa12.6□□□□□ -0.39
SGCA-202ENST00000344627 C16orf96A6NNT2 1141 aa12.6□□□□□ -0.39
SGCA-202ENST00000344627 TPP1O14773 563 aa12.6□□□□□ -0.39
SGCA-202ENST00000344627 ATMINO43313 823 aaPredicted RBP12.6□□□□□ -0.39
SGCA-202ENST00000344627 TSPAN6O43657 245 aa12.6□□□□□ -0.39
SGCA-202ENST00000344627 SIGLEC6O43699 453 aa12.6□□□□□ -0.39
SGCA-202ENST00000344627 PIAS2O75928 621 aa12.6□□□□□ -0.39
SGCA-202ENST00000344627 POP4O95707 220 aaKnown RBP12.6□□□□□ -0.39
SGCA-202ENST00000344627 CD160O95971 181 aa12.6□□□□□ -0.39
SGCA-202ENST00000344627 UGT2B4P06133 528 aa12.6□□□□□ -0.39
SGCA-202ENST00000344627 PSMA2P25787 234 aa12.6□□□□□ -0.39
SGCA-202ENST00000344627 MLLT3P42568 568 aaPredicted RBP12.6□□□□□ -0.39
SGCA-202ENST00000344627 ZNF165P49910 485 aa12.6□□□□□ -0.39
SGCA-202ENST00000344627 MYLK3Q32MK0 819 aa12.6□□□□□ -0.39
SGCA-202ENST00000344627 ZNF805Q5CZA5 627 aa12.6□□□□□ -0.39
SGCA-202ENST00000344627 PPP1R2P3Q6NXS1 205 aa12.6□□□□□ -0.39
SGCA-202ENST00000344627 KYAT3Q6YP21 454 aaKnown RBP12.6□□□□□ -0.39
SGCA-202ENST00000344627 Q6ZSR6 202 aa12.6□□□□□ -0.39
SGCA-202ENST00000344627 PARS2Q7L3T8 475 aaKnown RBP12.6□□□□□ -0.39
SGCA-202ENST00000344627 GPR155Q7Z3F1 870 aa12.6□□□□□ -0.39
SGCA-202ENST00000344627 DNAAF5Q86Y56 855 aa12.6□□□□□ -0.39
SGCA-202ENST00000344627 SLC25A45Q8N413 288 aa12.6□□□□□ -0.39
SGCA-202ENST00000344627 RTL3Q8N8U3 475 aaKnown RBP12.6□□□□□ -0.39
SGCA-202ENST00000344627 OR13H1Q8NG92 308 aa12.6□□□□□ -0.39
SGCA-202ENST00000344627 OR2AP1Q8NGE2 309 aa12.6□□□□□ -0.39
SGCA-202ENST00000344627 GLMNQ92990 594 aa12.6□□□□□ -0.39
SGCA-202ENST00000344627 CCDC97Q96F63 343 aaPredicted RBP12.6□□□□□ -0.39
SGCA-202ENST00000344627 HMCESQ96FZ2 354 aa12.6□□□□□ -0.39
SGCA-202ENST00000344627 KLHL32Q96NJ5 620 aa12.6□□□□□ -0.39
SGCA-202ENST00000344627 BPIFA3Q9BQP9 254 aa12.6□□□□□ -0.39
SGCA-202ENST00000344627 OSBPL1AQ9BXW6 950 aa12.6□□□□□ -0.39
SGCA-202ENST00000344627 SLC17A9Q9BYT1 436 aa12.6□□□□□ -0.39
SGCA-202ENST00000344627 GPR27Q9NS67 375 aa12.6□□□□□ -0.39
SGCA-202ENST00000344627 GPATCH2LQ9NWQ4 482 aa12.6□□□□□ -0.39
SGCA-202ENST00000344627 PCSK1NQ9UHG2 260 aa12.6□□□□□ -0.39
SGCA-202ENST00000344627 SALL4Q9UJQ4 1053 aa12.6□□□□□ -0.39
SGCA-202ENST00000344627 FZD10Q9ULW2 581 aa12.6□□□□□ -0.39
SGCA-202ENST00000344627 MYO6Q9UM54 1294 aa12.6□□□□□ -0.39
SGCA-202ENST00000344627 FADS3Q9Y5Q0 445 aa12.6□□□□□ -0.39
SGCA-202ENST00000344627 NBEAQ8NFP9 2946 aa12.59□□□□□ -0.39
SGCA-202ENST00000344627 IGLON5A6NGN9 336 aa12.59□□□□□ -0.39
SGCA-202ENST00000344627 RASA4BC9J798 803 aa12.59□□□□□ -0.39
SGCA-202ENST00000344627 FFAR2O15552 330 aa12.59□□□□□ -0.39
SGCA-202ENST00000344627 DAPK3O43293 454 aa12.59□□□□□ -0.39
SGCA-202ENST00000344627 RASA4O43374 803 aa12.59□□□□□ -0.39
SGCA-202ENST00000344627 TMCC1O94876 653 aa12.59□□□□□ -0.39
SGCA-202ENST00000344627 IGSF6O95976 241 aa12.59□□□□□ -0.39
SGCA-202ENST00000344627 GSRP00390 522 aa12.59□□□□□ -0.39
SGCA-202ENST00000344627 FTLP02792 175 aaPredicted RBP12.59□□□□□ -0.39
SGCA-202ENST00000344627 CSF2P04141 144 aa12.59□□□□□ -0.39
SGCA-202ENST00000344627 RPIAP49247 311 aa12.59□□□□□ -0.39
SGCA-202ENST00000344627 AIF1P55008 147 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms