RNA–Protein interactions for RNA: ENST00000343916.7

COL9A3-201, Transcript of collagen type IX alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-201ENST00000343916 TAS2R39P59534 338 aa19.58■□□□□ 0.72
COL9A3-201ENST00000343916 IRX1P78414 480 aaPredicted RBP19.58■□□□□ 0.72
COL9A3-201ENST00000343916 IHHQ14623 411 aa19.58■□□□□ 0.72
COL9A3-201ENST00000343916 UGP2Q16851 508 aa19.58■□□□□ 0.72
COL9A3-201ENST00000343916 TSNAXIP1Q2TAA8 658 aa19.58■□□□□ 0.72
COL9A3-201ENST00000343916 FAM26DQ5JW98 314 aa19.58■□□□□ 0.72
COL9A3-201ENST00000343916 C6orf163Q5TEZ5 329 aa19.58■□□□□ 0.72
COL9A3-201ENST00000343916 CNSTQ6PJW8 725 aa19.58■□□□□ 0.72
COL9A3-201ENST00000343916 LMNTD2Q8IXW0 634 aa19.58■□□□□ 0.72
COL9A3-201ENST00000343916 ZNF483Q8TF39 744 aaPredicted RBP19.58■□□□□ 0.72
COL9A3-201ENST00000343916 CCDC124Q96CT7 223 aaKnown RBP19.58■□□□□ 0.72
COL9A3-201ENST00000343916 NDNQ99608 321 aa19.58■□□□□ 0.72
COL9A3-201ENST00000343916 DRC3Q9H069 523 aa19.58■□□□□ 0.72
COL9A3-201ENST00000343916 TCF7L2Q9NQB0 619 aa19.58■□□□□ 0.72
COL9A3-201ENST00000343916 ZDHHC2Q9UIJ5 367 aa19.58■□□□□ 0.72
COL9A3-201ENST00000343916 DLX3O60479 287 aa19.57■□□□□ 0.72
COL9A3-201ENST00000343916 CD86P42081 329 aa19.57■□□□□ 0.72
COL9A3-201ENST00000343916 SLC24A5Q71RS6 500 aa19.57■□□□□ 0.72
COL9A3-201ENST00000343916 STYXQ8WUJ0 223 aa19.57■□□□□ 0.72
COL9A3-201ENST00000343916 GPR78Q96P69 363 aa19.57■□□□□ 0.72
COL9A3-201ENST00000343916 TTC1Q99614 292 aa19.57■□□□□ 0.72
COL9A3-201ENST00000343916 NUF2Q9BZD4 464 aa19.57■□□□□ 0.72
COL9A3-201ENST00000343916 TARM1B6A8C7 271 aa19.57■□□□□ 0.72
COL9A3-201ENST00000343916 MATN2O00339 956 aa19.57■□□□□ 0.72
COL9A3-201ENST00000343916 CABYRO75952 493 aa19.57■□□□□ 0.72
COL9A3-201ENST00000343916 JUNP05412 331 aaKnown RBP19.57■□□□□ 0.72
COL9A3-201ENST00000343916 APOA4P06727 396 aa19.57■□□□□ 0.72
COL9A3-201ENST00000343916 HMBSP08397 361 aa19.57■□□□□ 0.72
COL9A3-201ENST00000343916 SERPINB5P36952 375 aa19.57■□□□□ 0.72
COL9A3-201ENST00000343916 CUL3Q13618 768 aa19.57■□□□□ 0.72
COL9A3-201ENST00000343916 VARS2Q5ST30 1063 aaKnown RBP19.57■□□□□ 0.72
COL9A3-201ENST00000343916 RBM20Q5T481 1227 aaKnown RBP19.57■□□□□ 0.72
COL9A3-201ENST00000343916 TMC7Q7Z402 723 aa19.57■□□□□ 0.72
COL9A3-201ENST00000343916 CIR1Q86X95 450 aaPredicted RBP19.57■□□□□ 0.72
COL9A3-201ENST00000343916 DCP1BQ8IZD4 617 aaKnown RBP19.57■□□□□ 0.72
COL9A3-201ENST00000343916 PCSK9Q8NBP7 692 aaKnown RBP19.57■□□□□ 0.72
COL9A3-201ENST00000343916 PSMG2Q969U7 264 aa19.57■□□□□ 0.72
COL9A3-201ENST00000343916 CMTM5Q96DZ9 223 aa19.57■□□□□ 0.72
COL9A3-201ENST00000343916 C1orf74Q96LT6 269 aa19.57■□□□□ 0.72
COL9A3-201ENST00000343916 RNF186Q9NXI6 227 aa19.57■□□□□ 0.72
COL9A3-201ENST00000343916 FBXO5Q9UKT4 447 aa19.57■□□□□ 0.72
COL9A3-201ENST00000343916 FNDC1Q4ZHG4 1894 aaPredicted RBP19.56■□□□□ 0.72
COL9A3-201ENST00000343916 CCL22O00626 93 aa19.56■□□□□ 0.72
COL9A3-201ENST00000343916 INPPL1O15357 1258 aa19.56■□□□□ 0.72
COL9A3-201ENST00000343916 PAX3P23760 479 aa19.56■□□□□ 0.72
COL9A3-201ENST00000343916 RPL14P50914 215 aaKnown RBP19.56■□□□□ 0.72
COL9A3-201ENST00000343916 ACLYP53396 1101 aa19.56■□□□□ 0.72
COL9A3-201ENST00000343916 DSC2Q02487 901 aa19.56■□□□□ 0.72
COL9A3-201ENST00000343916 KDELC1Q6UW63 502 aa19.56■□□□□ 0.72
COL9A3-201ENST00000343916 MYLK4Q86YV6 388 aaPredicted RBP19.56■□□□□ 0.72
COL9A3-201ENST00000343916 ZNF683Q8IZ20 524 aa19.56■□□□□ 0.72
COL9A3-201ENST00000343916 DEFB107AQ8IZN7 70 aa19.56■□□□□ 0.72
COL9A3-201ENST00000343916 C2CD4AQ8NCU7 369 aaPredicted RBP19.56■□□□□ 0.72
COL9A3-201ENST00000343916 MID2Q9UJV3 735 aa19.56■□□□□ 0.72
COL9A3-201ENST00000343916 RAP2CQ9Y3L5 183 aa19.56■□□□□ 0.72
COL9A3-201ENST00000343916 H2AFYO75367 372 aaKnown RBP19.56■□□□□ 0.72
COL9A3-201ENST00000343916 TADA2AO75478 443 aa19.56■□□□□ 0.72
COL9A3-201ENST00000343916 GJB3O75712 270 aa19.56■□□□□ 0.72
COL9A3-201ENST00000343916 ACADSP16219 412 aa19.56■□□□□ 0.72
COL9A3-201ENST00000343916 TFEBP19484 476 aa19.56■□□□□ 0.72
COL9A3-201ENST00000343916 ITGAXP20702 1163 aa19.56■□□□□ 0.72
COL9A3-201ENST00000343916 KLF10Q13118 480 aa19.56■□□□□ 0.72
COL9A3-201ENST00000343916 TSTD2Q5T7W7 516 aa19.56■□□□□ 0.72
COL9A3-201ENST00000343916 NEPROQ6NW34 567 aa19.56■□□□□ 0.72
COL9A3-201ENST00000343916 KBTBD2Q8IY47 623 aa19.56■□□□□ 0.72
COL9A3-201ENST00000343916 CCNYL1Q8N7R7 359 aa19.56■□□□□ 0.72
COL9A3-201ENST00000343916 RDH11Q8TC12 318 aa19.56■□□□□ 0.72
COL9A3-201ENST00000343916 IGSF8Q969P0 613 aa19.56■□□□□ 0.72
COL9A3-201ENST00000343916 LENG8Q96PV6 779 aaPredicted RBP19.56■□□□□ 0.72
COL9A3-201ENST00000343916 UBE2OQ9C0C9 1292 aaKnown RBP19.56■□□□□ 0.72
COL9A3-201ENST00000343916 PRDM5Q9NQX1 630 aaPredicted RBP19.56■□□□□ 0.72
COL9A3-201ENST00000343916 PPM1HQ9ULR3 514 aa19.56■□□□□ 0.72
COL9A3-201ENST00000343916 ABT1Q9ULW3 272 aaKnown RBP19.56■□□□□ 0.72
COL9A3-201ENST00000343916 SLC27A5Q9Y2P5 690 aa19.56■□□□□ 0.72
COL9A3-201ENST00000343916 NEMP2A6NFY4 417 aa19.55■□□□□ 0.72
COL9A3-201ENST00000343916 BAG2O95816 211 aa19.55■□□□□ 0.72
COL9A3-201ENST00000343916 COX4I1P13073 169 aa19.55■□□□□ 0.72
COL9A3-201ENST00000343916 ANPEPP15144 967 aa19.55■□□□□ 0.72
COL9A3-201ENST00000343916 PAMP19021 973 aa19.55■□□□□ 0.72
COL9A3-201ENST00000343916 CST5P28325 142 aaPredicted RBP19.55■□□□□ 0.72
COL9A3-201ENST00000343916 TM4SF4P48230 202 aa19.55■□□□□ 0.72
COL9A3-201ENST00000343916 CD151P48509 253 aa19.55■□□□□ 0.72
COL9A3-201ENST00000343916 LSM12Q3MHD2 195 aaKnown RBP19.55■□□□□ 0.72
COL9A3-201ENST00000343916 CTXN3Q4LDR2 81 aa19.55■□□□□ 0.72
COL9A3-201ENST00000343916 RAP1GAP2Q684P5 730 aa19.55■□□□□ 0.72
COL9A3-201ENST00000343916 SEL1L3Q68CR1 1132 aa19.55■□□□□ 0.72
COL9A3-201ENST00000343916 TRAF7Q6Q0C0 670 aa19.55■□□□□ 0.72
COL9A3-201ENST00000343916 LSMEM2Q8N112 164 aa19.55■□□□□ 0.72
COL9A3-201ENST00000343916 UMODL1-AS1Q8N2C9 162 aa19.55■□□□□ 0.72
COL9A3-201ENST00000343916 PTCD2Q8WV60 388 aaKnown RBP19.55■□□□□ 0.72
COL9A3-201ENST00000343916 ZYG11BQ9C0D3 744 aa19.55■□□□□ 0.72
COL9A3-201ENST00000343916 SLC25A51Q9H1U9 297 aa19.55■□□□□ 0.72
COL9A3-201ENST00000343916 FBXO44Q9H4M3 255 aa19.55■□□□□ 0.72
COL9A3-201ENST00000343916 ZNF212Q9UDV6 495 aa19.55■□□□□ 0.72
COL9A3-201ENST00000343916 DOCK4Q8N1I0 1966 aa19.55■□□□□ 0.72
COL9A3-201ENST00000343916 TMEM233B4DJY2 109 aa19.54■□□□□ 0.72
COL9A3-201ENST00000343916 HDAC3O15379 428 aa19.54■□□□□ 0.72
COL9A3-201ENST00000343916 MAP3K13O43283 966 aa19.54■□□□□ 0.72
COL9A3-201ENST00000343916 EOMESO95936 686 aa19.54■□□□□ 0.72
COL9A3-201ENST00000343916 GLDCP23378 1020 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms