RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 TRIM77I1YAP6 450 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 HTRA2O43464 458 aaPredicted RBP11.99□□□□□ -0.49
RTN3-203ENST00000341307 B3GALNT1O75752 331 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 C22orf31O95567 290 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 VTNP04004 478 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 NCAM1P13591 858 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 ACO1P21399 889 aaKnown RBP11.99□□□□□ -0.49
RTN3-203ENST00000341307 IL32P24001 234 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 HADHAP40939 763 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 EFNA5P52803 228 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 BASP1P80723 227 aaKnown RBP11.99□□□□□ -0.49
RTN3-203ENST00000341307 DPYSQ14117 519 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 ZPBP2Q6X784 338 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 GALNT7Q86SF2 657 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 SLC22A16Q86VW1 577 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 HERC6Q8IVU3 1022 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 GALNT6Q8NCL4 622 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 NPLOC4Q8TAT6 608 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 FIG4Q92562 907 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 TMEM121Q9BTD3 319 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 APOL6Q9BWW8 343 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 OR2B2Q9GZK3 357 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 MAGEE1Q9HCI5 957 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 RWDD3Q9Y3V2 267 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 MAU2Q9Y6X3 613 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 EVPLQ92817 2033 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 DYRK3O43781 588 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 HBP1O60381 514 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 GNAO1P09471 354 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 GSTM1P09488 218 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 GZMAP12544 262 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 CD1EP15812 388 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 WEE1P30291 646 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 PRAMEP78395 509 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 CUL2Q13617 745 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 NHSL2Q5HYW2 709 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 C16orf46Q6P387 395 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 NEK5Q6P3R8 708 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 IDO2Q6ZQW0 420 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 PHTF2Q8N3S3 785 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 CMTM5Q96DZ9 223 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 KATNBL1Q9H079 304 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 VRTNQ9H8Y1 702 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 PCDHB4Q9Y5E5 795 aa11.99□□□□□ -0.49
RTN3-203ENST00000341307 A0A087WZ62 844 aa11.98□□□□□ -0.49
RTN3-203ENST00000341307 ZW10O43264 779 aa11.98□□□□□ -0.49
RTN3-203ENST00000341307 ASNA1O43681 348 aa11.98□□□□□ -0.49
RTN3-203ENST00000341307 ALDH1A2O94788 518 aa11.98□□□□□ -0.49
RTN3-203ENST00000341307 ALDH1A1P00352 501 aa11.98□□□□□ -0.49
RTN3-203ENST00000341307 CCDC159P0C7I6 412 aa11.98□□□□□ -0.49
RTN3-203ENST00000341307 RALAP11233 206 aa11.98□□□□□ -0.49
RTN3-203ENST00000341307 COX4I1P13073 169 aa11.98□□□□□ -0.49
RTN3-203ENST00000341307 CD58P19256 250 aa11.98□□□□□ -0.49
RTN3-203ENST00000341307 FGFR3P22607 806 aa11.98□□□□□ -0.49
RTN3-203ENST00000341307 ATXN3P54252 364 aaPredicted RBP11.98□□□□□ -0.49
RTN3-203ENST00000341307 MYL6P60660 151 aa11.98□□□□□ -0.49
RTN3-203ENST00000341307 TFAMQ00059 246 aaKnown RBP11.98□□□□□ -0.49
RTN3-203ENST00000341307 GAD2Q05329 585 aa11.98□□□□□ -0.49
RTN3-203ENST00000341307 MBTD1Q05BQ5 628 aa11.98□□□□□ -0.49
RTN3-203ENST00000341307 TNK2Q07912 1038 aa11.98□□□□□ -0.49
RTN3-203ENST00000341307 DLG2Q15700 870 aa11.98□□□□□ -0.49
RTN3-203ENST00000341307 PRAMEF19Q5SWL8 479 aa11.98□□□□□ -0.49
RTN3-203ENST00000341307 ATF7IP2Q5U623 682 aa11.98□□□□□ -0.49
RTN3-203ENST00000341307 ZCCHC8Q6NZY4 707 aaKnown RBP11.98□□□□□ -0.49
RTN3-203ENST00000341307 GSTA5Q7RTV2 222 aa11.98□□□□□ -0.49
RTN3-203ENST00000341307 MAVSQ7Z434 540 aa11.98□□□□□ -0.49
RTN3-203ENST00000341307 BRSK2Q8IWQ3 736 aa11.98□□□□□ -0.49
RTN3-203ENST00000341307 CSF3RQ99062 836 aa11.98□□□□□ -0.49
RTN3-203ENST00000341307 FDXACB1Q9BRP7 624 aaPredicted RBP11.98□□□□□ -0.49
RTN3-203ENST00000341307 ARHGAP26Q9UNA1 814 aa11.98□□□□□ -0.49
RTN3-203ENST00000341307 AKAP10O43572 662 aa11.98□□□□□ -0.49
RTN3-203ENST00000341307 GPC4O75487 556 aa11.98□□□□□ -0.49
RTN3-203ENST00000341307 ARHGEF15O94989 841 aa11.98□□□□□ -0.49
RTN3-203ENST00000341307 KRT3P12035 628 aa11.98□□□□□ -0.49
RTN3-203ENST00000341307 SMPD1P17405 629 aa11.98□□□□□ -0.49
RTN3-203ENST00000341307 GPD2P43304 727 aa11.98□□□□□ -0.49
RTN3-203ENST00000341307 SP3Q02447 781 aa11.98□□□□□ -0.49
RTN3-203ENST00000341307 LAMC2Q13753 1193 aa11.98□□□□□ -0.49
RTN3-203ENST00000341307 MSS51Q4VC12 460 aa11.98□□□□□ -0.49
RTN3-203ENST00000341307 COL13A1Q5TAT6 717 aaPredicted RBP11.98□□□□□ -0.49
RTN3-203ENST00000341307 RNASEH2BQ5TBB1 312 aaKnown RBP11.98□□□□□ -0.49
RTN3-203ENST00000341307 ACAD10Q6JQN1 1059 aa11.98□□□□□ -0.49
RTN3-203ENST00000341307 TTC33Q6PID6 262 aaPredicted RBP11.98□□□□□ -0.49
RTN3-203ENST00000341307 ZCCHC23Q6ZST2 131 aa11.98□□□□□ -0.49
RTN3-203ENST00000341307 TNIP2Q8NFZ5 429 aa11.98□□□□□ -0.49
RTN3-203ENST00000341307 CPB2Q96IY4 423 aa11.98□□□□□ -0.49
RTN3-203ENST00000341307 C16orf70Q9BSU1 422 aa11.98□□□□□ -0.49
RTN3-203ENST00000341307 ZNF717Q9BY31 904 aaPredicted RBP11.98□□□□□ -0.49
RTN3-203ENST00000341307 ENPP5Q9UJA9 477 aa11.98□□□□□ -0.49
RTN3-203ENST00000341307 CPSF3Q9UKF6 684 aaKnown RBP11.98□□□□□ -0.49
RTN3-203ENST00000341307 AKT3Q9Y243 479 aa11.98□□□□□ -0.49
RTN3-203ENST00000341307 GOLGA8SH3BPF8 625 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 OGTO15294 1046 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 CSPG5O95196 566 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 CXCL8P10145 99 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 UNGP13051 313 aaPredicted RBP11.97□□□□□ -0.49
RTN3-203ENST00000341307 ITIH1P19827 911 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 PKLRP30613 574 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 CASP3P42574 277 aa11.97□□□□□ -0.49
RTN3-203ENST00000341307 PRKAA2P54646 552 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms