RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 ARHGAP42A6NI28 874 aa15.48■□□□□ 0.07
PRKN-201ENST00000338468 UPK3BL1B0FP48 263 aa15.48■□□□□ 0.07
PRKN-201ENST00000338468 UPK3BL2E5RIL1 263 aa15.48■□□□□ 0.07
PRKN-201ENST00000338468 KRIT1O00522 736 aa15.48■□□□□ 0.07
PRKN-201ENST00000338468 VILLO15195 856 aa15.48■□□□□ 0.07
PRKN-201ENST00000338468 HYAL3O43820 417 aaPredicted RBP15.48■□□□□ 0.07
PRKN-201ENST00000338468 OPHN1O60890 802 aa15.48■□□□□ 0.07
PRKN-201ENST00000338468 RNGTTO60942 597 aaKnown RBP15.48■□□□□ 0.07
PRKN-201ENST00000338468 MTA2O94776 668 aa15.48■□□□□ 0.07
PRKN-201ENST00000338468 POP4O95707 220 aaKnown RBP15.48■□□□□ 0.07
PRKN-201ENST00000338468 ADRB3P13945 408 aa15.48■□□□□ 0.07
PRKN-201ENST00000338468 ARL4AP40617 200 aa15.48■□□□□ 0.07
PRKN-201ENST00000338468 ABL2P42684 1182 aa15.48■□□□□ 0.07
PRKN-201ENST00000338468 CTSKP43235 329 aa15.48■□□□□ 0.07
PRKN-201ENST00000338468 RGRP47804 291 aa15.48■□□□□ 0.07
PRKN-201ENST00000338468 NEK3P51956 506 aa15.48■□□□□ 0.07
PRKN-201ENST00000338468 RHOAP61586 193 aa15.48■□□□□ 0.07
PRKN-201ENST00000338468 MMRN1Q13201 1228 aa15.48■□□□□ 0.07
PRKN-201ENST00000338468 ZNF284Q2VY69 593 aa15.48■□□□□ 0.07
PRKN-201ENST00000338468 ZNF805Q5CZA5 627 aa15.48■□□□□ 0.07
PRKN-201ENST00000338468 NEK5Q6P3R8 708 aa15.48■□□□□ 0.07
PRKN-201ENST00000338468 RYBPQ8N488 228 aaPredicted RBP15.48■□□□□ 0.07
PRKN-201ENST00000338468 PPP1R16AQ96I34 528 aa15.48■□□□□ 0.07
PRKN-201ENST00000338468 LRIG1Q96JA1 1093 aa15.48■□□□□ 0.07
PRKN-201ENST00000338468 EXOC2Q96KP1 924 aa15.48■□□□□ 0.07
PRKN-201ENST00000338468 GDAP1L1Q96MZ0 367 aa15.48■□□□□ 0.07
PRKN-201ENST00000338468 GAREM1Q9H706 876 aa15.48■□□□□ 0.07
PRKN-201ENST00000338468 DYRK4Q9NR20 520 aa15.48■□□□□ 0.07
PRKN-201ENST00000338468 TPX2Q9ULW0 747 aaKnown RBP15.48■□□□□ 0.07
PRKN-201ENST00000338468 FNDC3AQ9Y2H6 1198 aaKnown RBP15.48■□□□□ 0.07
PRKN-201ENST00000338468 FADS3Q9Y5Q0 445 aa15.48■□□□□ 0.07
PRKN-201ENST00000338468 TMEM131Q92545 1883 aa15.48■□□□□ 0.07
PRKN-201ENST00000338468 A0A1W2PQU0 124 aa15.47■□□□□ 0.07
PRKN-201ENST00000338468 C16orf96A6NNT2 1141 aa15.47■□□□□ 0.07
PRKN-201ENST00000338468 DFFAO00273 331 aa15.47■□□□□ 0.07
PRKN-201ENST00000338468 KCNK3O14649 394 aa15.47■□□□□ 0.07
PRKN-201ENST00000338468 PEX11BO96011 259 aa15.47■□□□□ 0.07
PRKN-201ENST00000338468 UGT2B4P06133 528 aa15.47■□□□□ 0.07
PRKN-201ENST00000338468 MAN1A1P33908 653 aa15.47■□□□□ 0.07
PRKN-201ENST00000338468 CDH6P55285 790 aa15.47■□□□□ 0.07
PRKN-201ENST00000338468 DPYSL3Q14195 570 aa15.47■□□□□ 0.07
PRKN-201ENST00000338468 TCEAL1Q15170 157 aa15.47■□□□□ 0.07
PRKN-201ENST00000338468 TEAD4Q15561 434 aa15.47■□□□□ 0.07
PRKN-201ENST00000338468 HADHQ16836 314 aaKnown RBP15.47■□□□□ 0.07
PRKN-201ENST00000338468 TMEM259Q4ZIN3 620 aa15.47■□□□□ 0.07
PRKN-201ENST00000338468 SEL1L3Q68CR1 1132 aa15.47■□□□□ 0.07
PRKN-201ENST00000338468 NAPEPLDQ6IQ20 393 aa15.47■□□□□ 0.07
PRKN-201ENST00000338468 PRPF39Q86UA1 669 aaKnown RBP15.47■□□□□ 0.07
PRKN-201ENST00000338468 HORMAD1Q86X24 394 aa15.47■□□□□ 0.07
PRKN-201ENST00000338468 LZTR1Q8N653 840 aa15.47■□□□□ 0.07
PRKN-201ENST00000338468 SERAC1Q96JX3 654 aa15.47■□□□□ 0.07
PRKN-201ENST00000338468 NSMCE3Q96MG7 304 aa15.47■□□□□ 0.07
PRKN-201ENST00000338468 KLHL32Q96NJ5 620 aa15.47■□□□□ 0.07
PRKN-201ENST00000338468 KLHL11Q9NVR0 708 aa15.47■□□□□ 0.07
PRKN-201ENST00000338468 RCOR3Q9P2K3 495 aaPredicted RBP15.47■□□□□ 0.07
PRKN-201ENST00000338468 IPO11Q9UI26 975 aaKnown RBP15.47■□□□□ 0.07
PRKN-201ENST00000338468 MSRB2Q9Y3D2 182 aa15.47■□□□□ 0.07
PRKN-201ENST00000338468 TP53BP1Q12888 1972 aaPredicted RBP15.46■□□□□ 0.07
PRKN-201ENST00000338468 TMEM110-MUSTN1A8MSY1 372 aa15.46■□□□□ 0.07
PRKN-201ENST00000338468 MUSKO15146 869 aa15.46■□□□□ 0.07
PRKN-201ENST00000338468 AP1G1O43747 822 aa15.46■□□□□ 0.07
PRKN-201ENST00000338468 BUB1BO60566 1050 aaPredicted RBP15.46■□□□□ 0.07
PRKN-201ENST00000338468 LCA5LO95447 670 aa15.46■□□□□ 0.07
PRKN-201ENST00000338468 IGSF6O95976 241 aa15.46■□□□□ 0.07
PRKN-201ENST00000338468 PRLRP16471 622 aa15.46■□□□□ 0.07
PRKN-201ENST00000338468 FECHP22830 423 aa15.46■□□□□ 0.07
PRKN-201ENST00000338468 CD38P28907 300 aa15.46■□□□□ 0.07
PRKN-201ENST00000338468 SSR1P43307 286 aaKnown RBP15.46■□□□□ 0.07
PRKN-201ENST00000338468 SIM1P81133 766 aaPredicted RBP15.46■□□□□ 0.07
PRKN-201ENST00000338468 IL10RBQ08334 325 aa15.46■□□□□ 0.07
PRKN-201ENST00000338468 CCDC15Q0P6D6 951 aa15.46■□□□□ 0.07
PRKN-201ENST00000338468 SLC14A1Q13336 389 aa15.46■□□□□ 0.07
PRKN-201ENST00000338468 FGL2Q14314 439 aa15.46■□□□□ 0.07
PRKN-201ENST00000338468 KRT81Q14533 505 aa15.46■□□□□ 0.07
PRKN-201ENST00000338468 MESDQ14696 234 aa15.46■□□□□ 0.07
PRKN-201ENST00000338468 ZNF423Q2M1K9 1284 aa15.46■□□□□ 0.07
PRKN-201ENST00000338468 IL27RAQ6UWB1 636 aa15.46■□□□□ 0.07
PRKN-201ENST00000338468 TMCO3Q6UWJ1 677 aa15.46■□□□□ 0.07
PRKN-201ENST00000338468 GDPD4Q6W3E5 623 aa15.46■□□□□ 0.07
PRKN-201ENST00000338468 TMEM145Q8NBT3 493 aa15.46■□□□□ 0.07
PRKN-201ENST00000338468 TSEN2Q8NCE0 465 aaKnown RBP15.46■□□□□ 0.07
PRKN-201ENST00000338468 PCDH19Q8TAB3 1148 aa15.46■□□□□ 0.07
PRKN-201ENST00000338468 RFFLQ8WZ73 363 aa15.46■□□□□ 0.07
PRKN-201ENST00000338468 KLK6Q92876 244 aa15.46■□□□□ 0.07
PRKN-201ENST00000338468 CAMK1GQ96NX5 476 aa15.46■□□□□ 0.07
PRKN-201ENST00000338468 OSBPL1AQ9BXW6 950 aa15.46■□□□□ 0.07
PRKN-201ENST00000338468 CPEB1Q9BZB8 566 aaKnown RBP15.46■□□□□ 0.07
PRKN-201ENST00000338468 AASDHPPTQ9NRN7 309 aa15.46■□□□□ 0.07
PRKN-201ENST00000338468 GGT7Q9UJ14 662 aa15.46■□□□□ 0.07
PRKN-201ENST00000338468 KLK13Q9UKR3 277 aa15.46■□□□□ 0.07
PRKN-201ENST00000338468 INTUQ9ULD6 942 aa15.46■□□□□ 0.07
PRKN-201ENST00000338468 DMTF1Q9Y222 760 aa15.46■□□□□ 0.07
PRKN-201ENST00000338468 ITM2BQ9Y287 266 aa15.46■□□□□ 0.07
PRKN-201ENST00000338468 CA5BQ9Y2D0 317 aa15.46■□□□□ 0.07
PRKN-201ENST00000338468 FREM2Q5SZK8 3169 aa15.45■□□□□ 0.06
PRKN-201ENST00000338468 H0Y8X5 98 aa15.45■□□□□ 0.06
PRKN-201ENST00000338468 AREL1O15033 823 aa15.45■□□□□ 0.06
PRKN-201ENST00000338468 SH3BP5O60239 455 aa15.45■□□□□ 0.06
PRKN-201ENST00000338468 MAFKO60675 156 aa15.45■□□□□ 0.06
PRKN-201ENST00000338468 PCDH8O95206 1070 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms